RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 K7ERS5 55 aa4.12□□□□□ -1.75
HDAC9-201ENST00000401921 PKD1P98161 4303 aa4.12□□□□□ -1.75
HDAC9-201ENST00000401921 FAT2Q9NYQ8 4349 aa4.12□□□□□ -1.75
HDAC9-201ENST00000401921 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
HDAC9-201ENST00000401921 KMT2CQ8NEZ4 4911 aaKnown RBP4.09□□□□□ -1.76
HDAC9-201ENST00000401921 SACSQ9NZJ4 4579 aa4.08□□□□□ -1.76
HDAC9-201ENST00000401921 H0YAA0 97 aa4.08□□□□□ -1.76
HDAC9-201ENST00000401921 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
HDAC9-201ENST00000401921 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
HDAC9-201ENST00000401921 A0A0D9SG42 100 aa4.06□□□□□ -1.76
HDAC9-201ENST00000401921 H1FX-AS1Q4G0G2 97 aa4.05□□□□□ -1.76
HDAC9-201ENST00000401921 SEC61BP60468 96 aaKnown RBP4.02□□□□□ -1.77
HDAC9-201ENST00000401921 RPL37P61927 97 aaKnown RBP4.01□□□□□ -1.77
HDAC9-201ENST00000401921 KRTAP10-8P60410 259 aa4.01□□□□□ -1.77
HDAC9-201ENST00000401921 S4R3F8 94 aa4.01□□□□□ -1.77
HDAC9-201ENST00000401921 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
HDAC9-201ENST00000401921 XP32Q5T750 250 aa4□□□□□ -1.77
HDAC9-201ENST00000401921 APOBP04114 4563 aaKnown RBP3.99□□□□□ -1.77
HDAC9-201ENST00000401921 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
HDAC9-201ENST00000401921 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
HDAC9-201ENST00000401921 RYR3Q15413 4870 aa3.96□□□□□ -1.77
HDAC9-201ENST00000401921 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
HDAC9-201ENST00000401921 RYR2Q92736 4967 aa3.94□□□□□ -1.78
HDAC9-201ENST00000401921 TPRXLQ17RH7 258 aa3.93□□□□□ -1.78
HDAC9-201ENST00000401921 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
HDAC9-201ENST00000401921 KIAA1109Q2LD37 5005 aa3.91□□□□□ -1.78
HDAC9-201ENST00000401921 FAT3Q8TDW7 4589 aa3.89□□□□□ -1.79
HDAC9-201ENST00000401921 MT1HL1P0DM35 61 aa3.87□□□□□ -1.79
HDAC9-201ENST00000401921 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
HDAC9-201ENST00000401921 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
HDAC9-201ENST00000401921 KRTAP17-1Q9BYP8 105 aa3.86□□□□□ -1.79
HDAC9-201ENST00000401921 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
HDAC9-201ENST00000401921 EPPK1P58107 5090 aaKnown RBP3.85□□□□□ -1.79
HDAC9-201ENST00000401921 RYR1P21817 5038 aa3.85□□□□□ -1.79
HDAC9-201ENST00000401921 HSPG2P98160 4391 aa3.84□□□□□ -1.79
HDAC9-201ENST00000401921 M0QZ58 72 aa3.8□□□□□ -1.8
HDAC9-201ENST00000401921 KRTAP4-5Q9BYR2 181 aa3.8□□□□□ -1.8
HDAC9-201ENST00000401921 R4GN34 69 aa3.8□□□□□ -1.8
HDAC9-201ENST00000401921 LRP2P98164 4655 aa3.8□□□□□ -1.8
HDAC9-201ENST00000401921 TNXBP22105 4242 aa3.78□□□□□ -1.8
HDAC9-201ENST00000401921 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
HDAC9-201ENST00000401921 LPAP08519 4548 aa3.72□□□□□ -1.81
HDAC9-201ENST00000401921 KRTAP12-1P59990 96 aa3.71□□□□□ -1.82
HDAC9-201ENST00000401921 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
HDAC9-201ENST00000401921 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
HDAC9-201ENST00000401921 ABCA13Q86UQ4 5058 aa3.66□□□□□ -1.82
HDAC9-201ENST00000401921 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
HDAC9-201ENST00000401921 KRTAP4-1Q9BYQ7 146 aa3.62□□□□□ -1.83
HDAC9-201ENST00000401921 HERC2O95714 4834 aa3.59□□□□□ -1.83
HDAC9-201ENST00000401921 M0R2T5 61 aa3.58□□□□□ -1.84
HDAC9-201ENST00000401921 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
HDAC9-201ENST00000401921 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
HDAC9-201ENST00000401921 HERC1Q15751 4861 aa3.54□□□□□ -1.84
HDAC9-201ENST00000401921 MUC2Q02817 5179 aa3.51□□□□□ -1.85
HDAC9-201ENST00000401921 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
HDAC9-201ENST00000401921 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
HDAC9-201ENST00000401921 TNP1P09430 55 aa3.43□□□□□ -1.86
HDAC9-201ENST00000401921 RNF213Q63HN8 5207 aa3.42□□□□□ -1.86
HDAC9-201ENST00000401921 KRTAP19-2Q3LHN2 52 aa3.39□□□□□ -1.87
HDAC9-201ENST00000401921 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
HDAC9-201ENST00000401921 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
HDAC9-201ENST00000401921 KRTAP10-10P60014 251 aa3.38□□□□□ -1.87
HDAC9-201ENST00000401921 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
HDAC9-201ENST00000401921 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
HDAC9-201ENST00000401921 FLGP20930 4061 aaPredicted RBP3.32□□□□□ -1.88
HDAC9-201ENST00000401921 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
HDAC9-201ENST00000401921 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
HDAC9-201ENST00000401921 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
HDAC9-201ENST00000401921 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
HDAC9-201ENST00000401921 MT1HP80294 61 aa3.25□□□□□ -1.89
HDAC9-201ENST00000401921 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
HDAC9-201ENST00000401921 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
HDAC9-201ENST00000401921 INE1O15225 51 aa3.24□□□□□ -1.89
HDAC9-201ENST00000401921 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
HDAC9-201ENST00000401921 MT1FP04733 61 aa3.21□□□□□ -1.9
HDAC9-201ENST00000401921 MT2AP02795 61 aa3.21□□□□□ -1.9
HDAC9-201ENST00000401921 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
HDAC9-201ENST00000401921 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
HDAC9-201ENST00000401921 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.17□□□□□ -1.9
HDAC9-201ENST00000401921 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
HDAC9-201ENST00000401921 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
HDAC9-201ENST00000401921 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
HDAC9-201ENST00000401921 KRTAP9-2Q9BYQ4 174 aa3.12□□□□□ -1.91
HDAC9-201ENST00000401921 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.92
HDAC9-201ENST00000401921 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
HDAC9-201ENST00000401921 MT1BP07438 61 aa3.06□□□□□ -1.92
HDAC9-201ENST00000401921 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
HDAC9-201ENST00000401921 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
HDAC9-201ENST00000401921 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
HDAC9-201ENST00000401921 MT1XP80297 61 aa3.04□□□□□ -1.92
HDAC9-201ENST00000401921 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
HDAC9-201ENST00000401921 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
HDAC9-201ENST00000401921 KRTAP9-3Q9BYQ3 159 aa3.01□□□□□ -1.93
HDAC9-201ENST00000401921 FSIP2Q5CZC0 6907 aa3□□□□□ -1.93
HDAC9-201ENST00000401921 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
HDAC9-201ENST00000401921 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
HDAC9-201ENST00000401921 USH2AO75445 5202 aa2.99□□□□□ -1.93
HDAC9-201ENST00000401921 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
HDAC9-201ENST00000401921 KRTAP19-4Q3LI73 84 aa2.92□□□□□ -1.94
HDAC9-201ENST00000401921 KRTAP19-5Q3LI72 72 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms