RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 PKHD1P08F94 4074 aa9.58□□□□□ -0.88
GAREM2-201ENST00000401533 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
GAREM2-201ENST00000401533 KRTAP3-1Q9BYR8 98 aa9.56□□□□□ -0.88
GAREM2-201ENST00000401533 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
GAREM2-201ENST00000401533 SACSQ9NZJ4 4579 aa9.55□□□□□ -0.88
GAREM2-201ENST00000401533 KRTAP25-1Q3LHN0 102 aa9.54□□□□□ -0.88
GAREM2-201ENST00000401533 FAT1Q14517 4588 aa9.53□□□□□ -0.88
GAREM2-201ENST00000401533 P0C880 135 aa9.53□□□□□ -0.88
GAREM2-201ENST00000401533 KRTAP10-4P60372 401 aaPredicted RBP9.48□□□□□ -0.89
GAREM2-201ENST00000401533 C10orf95Q9H7T3 257 aa9.44□□□□□ -0.9
GAREM2-201ENST00000401533 H3BS24 57 aa9.39□□□□□ -0.91
GAREM2-201ENST00000401533 TPRXLQ17RH7 258 aa9.33□□□□□ -0.92
GAREM2-201ENST00000401533 APOBP04114 4563 aaKnown RBP9.3□□□□□ -0.92
GAREM2-201ENST00000401533 RYR2Q92736 4967 aa9.29□□□□□ -0.92
GAREM2-201ENST00000401533 KMT2CQ8NEZ4 4911 aaKnown RBP9.27□□□□□ -0.93
GAREM2-201ENST00000401533 KRTAP13-4Q3LI77 160 aa9.16□□□□□ -0.94
GAREM2-201ENST00000401533 LUZP6Q538Z0 58 aa9.16□□□□□ -0.94
GAREM2-201ENST00000401533 MYCBP2O75592 4640 aa9.15□□□□□ -0.94
GAREM2-201ENST00000401533 MT1HL1P0DM35 61 aa9.15□□□□□ -0.94
GAREM2-201ENST00000401533 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
GAREM2-201ENST00000401533 KRTAP10-6P60371 365 aaPredicted RBP9.11□□□□□ -0.95
GAREM2-201ENST00000401533 KRTAP12-2P59991 146 aa9.11□□□□□ -0.95
GAREM2-201ENST00000401533 KRTAP4-5Q9BYR2 181 aa9.1□□□□□ -0.95
GAREM2-201ENST00000401533 NDUFAF8A1L188 74 aa9.04□□□□□ -0.96
GAREM2-201ENST00000401533 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
GAREM2-201ENST00000401533 PKHD1L1Q86WI1 4243 aa9.02□□□□□ -0.97
GAREM2-201ENST00000401533 PLAC4Q8WY50 150 aa9.02□□□□□ -0.97
GAREM2-201ENST00000401533 KIAA1109Q2LD37 5005 aa9.01□□□□□ -0.97
GAREM2-201ENST00000401533 KRTAP17-1Q9BYP8 105 aa9□□□□□ -0.97
GAREM2-201ENST00000401533 RYR3Q15413 4870 aa8.97□□□□□ -0.97
GAREM2-201ENST00000401533 HSPG2P98160 4391 aa8.97□□□□□ -0.97
GAREM2-201ENST00000401533 RYR1P21817 5038 aa8.96□□□□□ -0.98
GAREM2-201ENST00000401533 KRTAP12-1P59990 96 aa8.95□□□□□ -0.98
GAREM2-201ENST00000401533 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
GAREM2-201ENST00000401533 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.99
GAREM2-201ENST00000401533 TNXBP22105 4242 aa8.84□□□□□ -0.99
GAREM2-201ENST00000401533 TNP1P09430 55 aa8.81□□□□□ -1
GAREM2-201ENST00000401533 KRTAP10-10P60014 251 aa8.72□□□□□ -1.01
GAREM2-201ENST00000401533 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
GAREM2-201ENST00000401533 LRP2P98164 4655 aa8.58□□□□□ -1.04
GAREM2-201ENST00000401533 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
GAREM2-201ENST00000401533 A0A0A0MQY5 61 aa8.54□□□□□ -1.04
GAREM2-201ENST00000401533 PP632Q6XCG6 107 aa8.51□□□□□ -1.05
GAREM2-201ENST00000401533 KRTAP4-1Q9BYQ7 146 aa8.46□□□□□ -1.06
GAREM2-201ENST00000401533 LPAP08519 4548 aa8.45□□□□□ -1.06
GAREM2-201ENST00000401533 ABCA13Q86UQ4 5058 aa8.4□□□□□ -1.07
GAREM2-201ENST00000401533 HERC2O95714 4834 aa8.34□□□□□ -1.07
GAREM2-201ENST00000401533 KRTAP15-1Q3LI76 137 aa8.14□□□□□ -1.11
GAREM2-201ENST00000401533 BIRC6Q9NR09 4857 aa8.09□□□□□ -1.11
GAREM2-201ENST00000401533 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
GAREM2-201ENST00000401533 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
GAREM2-201ENST00000401533 MUC2Q02817 5179 aa7.94□□□□□ -1.14
GAREM2-201ENST00000401533 KRTAP19-2Q3LHN2 52 aa7.92□□□□□ -1.14
GAREM2-201ENST00000401533 HERC1Q15751 4861 aa7.88□□□□□ -1.15
GAREM2-201ENST00000401533 PCLOQ9Y6V0 5065 aa7.79□□□□□ -1.16
GAREM2-201ENST00000401533 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
GAREM2-201ENST00000401533 MT1HP80294 61 aa7.76□□□□□ -1.17
GAREM2-201ENST00000401533 FLGP20930 4061 aaPredicted RBP7.71□□□□□ -1.18
GAREM2-201ENST00000401533 HMCN2Q8NDA2 5059 aa7.71□□□□□ -1.18
GAREM2-201ENST00000401533 KRTAP10-12P60413 245 aa7.7□□□□□ -1.18
GAREM2-201ENST00000401533 MT2AP02795 61 aa7.69□□□□□ -1.18
GAREM2-201ENST00000401533 MT1FP04733 61 aa7.67□□□□□ -1.18
GAREM2-201ENST00000401533 LCE2CQ5TA81 110 aa7.62□□□□□ -1.19
GAREM2-201ENST00000401533 FAT4Q6V0I7 4981 aa7.6□□□□□ -1.19
GAREM2-201ENST00000401533 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
GAREM2-201ENST00000401533 SPRR2GQ9BYE4 73 aa7.57□□□□□ -1.2
GAREM2-201ENST00000401533 RNF213Q63HN8 5207 aa7.56□□□□□ -1.2
GAREM2-201ENST00000401533 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
GAREM2-201ENST00000401533 UBR4Q5T4S7 5183 aa7.51□□□□□ -1.21
GAREM2-201ENST00000401533 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
GAREM2-201ENST00000401533 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.24
GAREM2-201ENST00000401533 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
GAREM2-201ENST00000401533 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
GAREM2-201ENST00000401533 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
GAREM2-201ENST00000401533 MT1BP07438 61 aa7.15□□□□□ -1.26
GAREM2-201ENST00000401533 MT1XP80297 61 aa7.12□□□□□ -1.27
GAREM2-201ENST00000401533 KRTAP19-8Q3LI54 63 aa7.12□□□□□ -1.27
GAREM2-201ENST00000401533 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
GAREM2-201ENST00000401533 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
GAREM2-201ENST00000401533 KRTAP19-5Q3LI72 72 aa7.08□□□□□ -1.28
GAREM2-201ENST00000401533 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
GAREM2-201ENST00000401533 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
GAREM2-201ENST00000401533 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
GAREM2-201ENST00000401533 INE1O15225 51 aa6.86□□□□□ -1.31
GAREM2-201ENST00000401533 LCE2BO14633 110 aa6.83□□□□□ -1.32
GAREM2-201ENST00000401533 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
GAREM2-201ENST00000401533 SPRR5A0A1B0GTR4 108 aa6.74□□□□□ -1.33
GAREM2-201ENST00000401533 USH2AO75445 5202 aa6.71□□□□□ -1.34
GAREM2-201ENST00000401533 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
GAREM2-201ENST00000401533 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
GAREM2-201ENST00000401533 SPRR2FQ96RM1 72 aa6.58□□□□□ -1.36
GAREM2-201ENST00000401533 OBSCNQ5VST9 7968 aa6.52□□□□□ -1.37
GAREM2-201ENST00000401533 KMT2DO14686 5537 aa6.51□□□□□ -1.37
GAREM2-201ENST00000401533 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
GAREM2-201ENST00000401533 MT1GP13640 62 aa6.39□□□□□ -1.39
GAREM2-201ENST00000401533 DSTQ03001 7570 aaKnown RBP6.38□□□□□ -1.39
GAREM2-201ENST00000401533 FCGBPQ9Y6R7 5405 aaPredicted RBP6.29□□□□□ -1.4
GAREM2-201ENST00000401533 MT1LQ93083 61 aa6.27□□□□□ -1.41
GAREM2-201ENST00000401533 MT1EP04732 61 aa6.25□□□□□ -1.41
GAREM2-201ENST00000401533 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms