RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
CLHC1-201ENST00000401408 DEFB4AO15263 64 aa2.05□□□□□ -2.08
CLHC1-201ENST00000401408 IAPPP10997 89 aa2.05□□□□□ -2.08
CLHC1-201ENST00000401408 SMIM11BQ8TCY0 68 aa2.05□□□□□ -2.08
CLHC1-201ENST00000401408 DEFB104AQ8WTQ1 72 aa2.05□□□□□ -2.08
CLHC1-201ENST00000401408 DEFB131BA0A096LNP1 70 aa2.04□□□□□ -2.08
CLHC1-201ENST00000401408 LINC00158P58513 81 aa2.04□□□□□ -2.08
CLHC1-201ENST00000401408 KRTAP10-8P60410 259 aa2.04□□□□□ -2.08
CLHC1-201ENST00000401408 PLAC4Q8WY50 150 aa2.04□□□□□ -2.08
CLHC1-201ENST00000401408 USMG5Q96IX5 58 aa2.04□□□□□ -2.08
CLHC1-201ENST00000401408 IGKV2-28A0A075B6P5 120 aa2.03□□□□□ -2.08
CLHC1-201ENST00000401408 IGKV2D-28P01615 120 aa2.03□□□□□ -2.08
CLHC1-201ENST00000401408 KLK9Q2XQG4 91 aa2.03□□□□□ -2.08
CLHC1-201ENST00000401408 LINC00308Q8TCZ7 52 aa2.03□□□□□ -2.08
CLHC1-201ENST00000401408 GVQW2A0A096LPI5 108 aaPredicted RBP2.02□□□□□ -2.09
CLHC1-201ENST00000401408 GAS8-AS1O95177 125 aa2.02□□□□□ -2.09
CLHC1-201ENST00000401408 SMIM2Q9BVW6 85 aa2.02□□□□□ -2.09
CLHC1-201ENST00000401408 KRTAP13-2Q52LG2 175 aa2.02□□□□□ -2.09
CLHC1-201ENST00000401408 IGKV2-24A0A0C4DH68 120 aa2.01□□□□□ -2.09
CLHC1-201ENST00000401408 Q6ZSA8 131 aa2.01□□□□□ -2.09
CLHC1-201ENST00000401408 ANAPC11Q9NYG5 84 aa2.01□□□□□ -2.09
CLHC1-201ENST00000401408 CDKN2A-AS1Q9UH64 79 aa2.01□□□□□ -2.09
CLHC1-201ENST00000401408 ANGP03950 147 aaKnown RBP2.01□□□□□ -2.09
CLHC1-201ENST00000401408 PRR9Q5T870 116 aa2.01□□□□□ -2.09
CLHC1-201ENST00000401408 UBE2DNLQ8IWF7 75 aa2.01□□□□□ -2.09
CLHC1-201ENST00000401408 ARHGAP5-AS1Q96IT6 56 aa2□□□□□ -2.09
CLHC1-201ENST00000401408 CNFNQ9BYD5 112 aa1.99□□□□□ -2.09
CLHC1-201ENST00000401408 NDUFA1O15239 70 aa1.99□□□□□ -2.09
CLHC1-201ENST00000401408 Q8IZM0 81 aa1.99□□□□□ -2.09
CLHC1-201ENST00000401408 TTTY10Q9BZA0 68 aa1.99□□□□□ -2.09
CLHC1-201ENST00000401408 PP632Q6XCG6 107 aa1.98□□□□□ -2.09
CLHC1-201ENST00000401408 SPART-AS1P0CW21 52 aa1.97□□□□□ -2.09
CLHC1-201ENST00000401408 PIGYQ3MUY2 71 aa1.97□□□□□ -2.09
CLHC1-201ENST00000401408 CRIPTQ9P021 101 aa1.97□□□□□ -2.09
CLHC1-201ENST00000401408 RPL39P5Q59GN2 51 aa1.96□□□□□ -2.1
CLHC1-201ENST00000401408 APELAP0DMC3 54 aa1.95□□□□□ -2.1
CLHC1-201ENST00000401408 IGFL1Q6UW32 110 aa1.95□□□□□ -2.1
CLHC1-201ENST00000401408 KRTAP12-2P59991 146 aa1.94□□□□□ -2.1
CLHC1-201ENST00000401408 DEFB131AP59861 70 aa1.94□□□□□ -2.1
CLHC1-201ENST00000401408 SPINK13Q1W4C9 94 aa1.93□□□□□ -2.1
CLHC1-201ENST00000401408 RHPN1-AS1Q9BWJ2 59 aa1.93□□□□□ -2.1
CLHC1-201ENST00000401408 KRTAP1-4P0C5Y4 121 aa1.93□□□□□ -2.1
CLHC1-201ENST00000401408 H3BNG1 76 aa1.91□□□□□ -2.1
CLHC1-201ENST00000401408 HTN3P15516 51 aa1.91□□□□□ -2.1
CLHC1-201ENST00000401408 LINC00575Q6W349 94 aa1.91□□□□□ -2.1
CLHC1-201ENST00000401408 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
CLHC1-201ENST00000401408 MUC17Q685J3 4493 aa1.91□□□□□ -2.1
CLHC1-201ENST00000401408 A8MTW9 85 aa1.9□□□□□ -2.1
CLHC1-201ENST00000401408 K7EIM0 57 aa1.9□□□□□ -2.1
CLHC1-201ENST00000401408 RPL37P61927 97 aaKnown RBP1.9□□□□□ -2.1
CLHC1-201ENST00000401408 TMEM167AQ8TBQ9 72 aa1.9□□□□□ -2.1
CLHC1-201ENST00000401408 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
CLHC1-201ENST00000401408 A0A096LPF7 62 aa1.89□□□□□ -2.11
CLHC1-201ENST00000401408 MRPL34Q9BQ48 92 aaKnown RBP1.89□□□□□ -2.11
CLHC1-201ENST00000401408 PCOTHQ58A44 107 aa1.89□□□□□ -2.11
CLHC1-201ENST00000401408 WT1-ASQ06250 92 aa1.88□□□□□ -2.11
CLHC1-201ENST00000401408 UNQ6190/PRO20217Q6UXQ8 127 aa1.88□□□□□ -2.11
CLHC1-201ENST00000401408 KRTAP2-2Q9BYT5 123 aa1.88□□□□□ -2.11
CLHC1-201ENST00000401408 TP53AIP1Q9HCN2 124 aa1.88□□□□□ -2.11
CLHC1-201ENST00000401408 C6orf48Q9UBA6 75 aa1.88□□□□□ -2.11
CLHC1-201ENST00000401408 I3L2K1 104 aa1.87□□□□□ -2.11
CLHC1-201ENST00000401408 K7EQZ3 153 aa1.87□□□□□ -2.11
CLHC1-201ENST00000401408 DEFB130BP0DP73 79 aa1.86□□□□□ -2.11
CLHC1-201ENST00000401408 DEFB130AP0DP74 79 aa1.86□□□□□ -2.11
CLHC1-201ENST00000401408 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
CLHC1-201ENST00000401408 POLR2KP53803 58 aaKnown RBP1.86□□□□□ -2.11
CLHC1-201ENST00000401408 DEFB1P60022 68 aa1.86□□□□□ -2.11
CLHC1-201ENST00000401408 RPL39P62891 51 aaKnown RBP1.86□□□□□ -2.11
CLHC1-201ENST00000401408 COX6B2Q6YFQ2 88 aa1.86□□□□□ -2.11
CLHC1-201ENST00000401408 H0YAA0 97 aa1.85□□□□□ -2.11
CLHC1-201ENST00000401408 WFDC10BQ8IUB3 73 aa1.85□□□□□ -2.11
CLHC1-201ENST00000401408 WFDC13Q8IUB5 93 aa1.84□□□□□ -2.11
CLHC1-201ENST00000401408 RPL39LQ96EH5 51 aaKnown RBP1.84□□□□□ -2.11
CLHC1-201ENST00000401408 USH2AO75445 5202 aa1.84□□□□□ -2.12
CLHC1-201ENST00000401408 KRTAP13-4Q3LI77 160 aa1.83□□□□□ -2.12
CLHC1-201ENST00000401408 MT3P25713 68 aa1.83□□□□□ -2.12
CLHC1-201ENST00000401408 SPINK9Q5DT21 86 aa1.82□□□□□ -2.12
CLHC1-201ENST00000401408 LINC01556Q5JQF7 62 aa1.82□□□□□ -2.12
CLHC1-201ENST00000401408 C10orf95Q9H7T3 257 aa1.82□□□□□ -2.12
CLHC1-201ENST00000401408 NOP10Q9NPE3 64 aaKnown RBP1.82□□□□□ -2.12
CLHC1-201ENST00000401408 COX6A2Q02221 97 aa1.8□□□□□ -2.12
CLHC1-201ENST00000401408 LCE1AQ5T7P2 110 aa1.8□□□□□ -2.12
CLHC1-201ENST00000401408 FLGP20930 4061 aaPredicted RBP1.8□□□□□ -2.12
CLHC1-201ENST00000401408 PRCDQ00LT1 54 aa1.79□□□□□ -2.12
CLHC1-201ENST00000401408 PRO0255Q9UI72 69 aa1.79□□□□□ -2.12
CLHC1-201ENST00000401408 KRTAP19-2Q3LHN2 52 aa1.79□□□□□ -2.12
CLHC1-201ENST00000401408 SPINK6Q6UWN8 80 aa1.79□□□□□ -2.12
CLHC1-201ENST00000401408 IGLV5-48A0A075B6I7 105 aa1.78□□□□□ -2.12
CLHC1-201ENST00000401408 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
CLHC1-201ENST00000401408 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
CLHC1-201ENST00000401408 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
CLHC1-201ENST00000401408 HTN1P15515 57 aa1.76□□□□□ -2.13
CLHC1-201ENST00000401408 MT1HP80294 61 aa1.76□□□□□ -2.13
CLHC1-201ENST00000401408 H1FX-AS1Q4G0G2 97 aa1.76□□□□□ -2.13
CLHC1-201ENST00000401408 SYNE2Q8WXH0 6885 aaKnown RBP1.76□□□□□ -2.13
CLHC1-201ENST00000401408 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
CLHC1-201ENST00000401408 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
CLHC1-201ENST00000401408 DEFB105AQ8NG35 78 aa1.72□□□□□ -2.13
CLHC1-201ENST00000401408 M0QY20 66 aa1.71□□□□□ -2.14
CLHC1-201ENST00000401408 MMP24-AS1A0A0U1RRL7 71 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms