RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 ETDBQ3ZM63 59 aa6.44□□□□□ -1.38
SMARCE1-204ENST00000400122 NEBP20929 6669 aa6.43□□□□□ -1.38
SMARCE1-204ENST00000400122 H0YAA0 97 aa6.41□□□□□ -1.38
SMARCE1-204ENST00000400122 ATP5EP2Q5VTU8 51 aa6.41□□□□□ -1.38
SMARCE1-204ENST00000400122 FAM240AA0A1B0GVK7 77 aa6.4□□□□□ -1.38
SMARCE1-204ENST00000400122 IMUPQ9GZP8 106 aa6.4□□□□□ -1.38
SMARCE1-204ENST00000400122 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
SMARCE1-204ENST00000400122 ATOX1O00244 68 aa6.38□□□□□ -1.39
SMARCE1-204ENST00000400122 UQCRQO14949 82 aa6.37□□□□□ -1.39
SMARCE1-204ENST00000400122 A8MUN3 132 aa6.34□□□□□ -1.39
SMARCE1-204ENST00000400122 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
SMARCE1-204ENST00000400122 NDUFC1O43677 76 aa6.32□□□□□ -1.4
SMARCE1-204ENST00000400122 A0A087WVE0 104 aa6.3□□□□□ -1.4
SMARCE1-204ENST00000400122 H0Y9P7 68 aa6.27□□□□□ -1.41
SMARCE1-204ENST00000400122 KMT2DO14686 5537 aa6.26□□□□□ -1.41
SMARCE1-204ENST00000400122 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
SMARCE1-204ENST00000400122 HIST1H4AP62805 103 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-204ENST00000400122 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
SMARCE1-204ENST00000400122 MDN1Q9NU22 5596 aa6.22□□□□□ -1.41
SMARCE1-204ENST00000400122 PCP4L1A6NKN8 68 aa6.19□□□□□ -1.42
SMARCE1-204ENST00000400122 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
SMARCE1-204ENST00000400122 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
SMARCE1-204ENST00000400122 MP68P56378 58 aa6.16□□□□□ -1.42
SMARCE1-204ENST00000400122 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
SMARCE1-204ENST00000400122 ADM2Q7Z4H4 148 aa6.16□□□□□ -1.42
SMARCE1-204ENST00000400122 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
SMARCE1-204ENST00000400122 H3BPC8 53 aa6.14□□□□□ -1.43
SMARCE1-204ENST00000400122 C20orf197Q8N268 126 aa6.14□□□□□ -1.43
SMARCE1-204ENST00000400122 MT1XP80297 61 aa6.09□□□□□ -1.43
SMARCE1-204ENST00000400122 PLAC4Q8WY50 150 aa6.09□□□□□ -1.43
SMARCE1-204ENST00000400122 KRTAP12-2P59991 146 aa6.08□□□□□ -1.44
SMARCE1-204ENST00000400122 DMAC1Q96GE9 116 aa6.06□□□□□ -1.44
SMARCE1-204ENST00000400122 R4GN34 69 aa6.06□□□□□ -1.44
SMARCE1-204ENST00000400122 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
SMARCE1-204ENST00000400122 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
SMARCE1-204ENST00000400122 P0C880 135 aa6□□□□□ -1.45
SMARCE1-204ENST00000400122 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
SMARCE1-204ENST00000400122 J3QR89 54 aa5.99□□□□□ -1.45
SMARCE1-204ENST00000400122 TRAV7A0A075B6U4 112 aa5.98□□□□□ -1.45
SMARCE1-204ENST00000400122 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
SMARCE1-204ENST00000400122 M0QZ58 72 aa5.96□□□□□ -1.46
SMARCE1-204ENST00000400122 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
SMARCE1-204ENST00000400122 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
SMARCE1-204ENST00000400122 SPRR2EP22531 72 aa5.93□□□□□ -1.46
SMARCE1-204ENST00000400122 SPRR2BP35325 72 aa5.93□□□□□ -1.46
SMARCE1-204ENST00000400122 SPRR2AP35326 72 aa5.93□□□□□ -1.46
SMARCE1-204ENST00000400122 SCGB1A1P11684 91 aa5.92□□□□□ -1.46
SMARCE1-204ENST00000400122 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
SMARCE1-204ENST00000400122 ACYP2P14621 99 aa5.89□□□□□ -1.47
SMARCE1-204ENST00000400122 A0A1B0GV90 55 aa5.88□□□□□ -1.47
SMARCE1-204ENST00000400122 SPTSSBQ8NFR3 76 aa5.87□□□□□ -1.47
SMARCE1-204ENST00000400122 SMIM20Q8N5G0 67 aa5.86□□□□□ -1.47
SMARCE1-204ENST00000400122 KRTAP10-12P60413 245 aa5.84□□□□□ -1.47
SMARCE1-204ENST00000400122 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
SMARCE1-204ENST00000400122 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
SMARCE1-204ENST00000400122 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
SMARCE1-204ENST00000400122 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
SMARCE1-204ENST00000400122 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
SMARCE1-204ENST00000400122 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
SMARCE1-204ENST00000400122 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
SMARCE1-204ENST00000400122 MT-ATP8P03928 68 aa5.74□□□□□ -1.49
SMARCE1-204ENST00000400122 SPRR2DP22532 72 aa5.74□□□□□ -1.49
SMARCE1-204ENST00000400122 SPANXA2-OT1Q8N9U9 137 aa5.71□□□□□ -1.5
SMARCE1-204ENST00000400122 CHKB-CPT1BH3BT56 60 aa5.7□□□□□ -1.5
SMARCE1-204ENST00000400122 H3BS24 57 aa5.69□□□□□ -1.5
SMARCE1-204ENST00000400122 K7ERU9 68 aa5.67□□□□□ -1.5
SMARCE1-204ENST00000400122 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
SMARCE1-204ENST00000400122 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
SMARCE1-204ENST00000400122 SNURFQ9Y675 71 aa5.57□□□□□ -1.52
SMARCE1-204ENST00000400122 KRTAP13-4Q3LI77 160 aa5.55□□□□□ -1.52
SMARCE1-204ENST00000400122 SERP2Q8N6R1 65 aa5.54□□□□□ -1.52
SMARCE1-204ENST00000400122 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
SMARCE1-204ENST00000400122 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
SMARCE1-204ENST00000400122 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-204ENST00000400122 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.54
SMARCE1-204ENST00000400122 SEC61GP60059 68 aa5.44□□□□□ -1.54
SMARCE1-204ENST00000400122 COA5Q86WW8 74 aa5.44□□□□□ -1.54
SMARCE1-204ENST00000400122 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
SMARCE1-204ENST00000400122 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
SMARCE1-204ENST00000400122 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
SMARCE1-204ENST00000400122 MT1EP04732 61 aa5.41□□□□□ -1.54
SMARCE1-204ENST00000400122 A0A1B0GU33 70 aa5.35□□□□□ -1.55
SMARCE1-204ENST00000400122 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
SMARCE1-204ENST00000400122 MT1GP13640 62 aa5.32□□□□□ -1.56
SMARCE1-204ENST00000400122 A0A0D9SG42 100 aa5.31□□□□□ -1.56
SMARCE1-204ENST00000400122 COX7CP15954 63 aa5.31□□□□□ -1.56
SMARCE1-204ENST00000400122 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
SMARCE1-204ENST00000400122 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
SMARCE1-204ENST00000400122 H7BZZ5 65 aa5.28□□□□□ -1.56
SMARCE1-204ENST00000400122 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
SMARCE1-204ENST00000400122 PP632Q6XCG6 107 aa5.27□□□□□ -1.57
SMARCE1-204ENST00000400122 SPINT4Q6UDR6 99 aa5.26□□□□□ -1.57
SMARCE1-204ENST00000400122 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
SMARCE1-204ENST00000400122 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
SMARCE1-204ENST00000400122 SMIM26A0A096LP01 95 aa5.23□□□□□ -1.57
SMARCE1-204ENST00000400122 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
SMARCE1-204ENST00000400122 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
SMARCE1-204ENST00000400122 A0A1B0GU69 56 aa5.18□□□□□ -1.58
SMARCE1-204ENST00000400122 MT1MQ8N339 61 aa5.16□□□□□ -1.58
SMARCE1-204ENST00000400122 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms