RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
SIRPA-203ENST00000400068 KRTAP10-4P60372 401 aaPredicted RBP6.97□□□□□ -1.29
SIRPA-203ENST00000400068 DYNC1H1Q14204 4646 aaKnown RBP6.97□□□□□ -1.29
SIRPA-203ENST00000400068 H0YAA0 97 aa6.96□□□□□ -1.3
SIRPA-203ENST00000400068 M0QZ58 72 aa6.96□□□□□ -1.3
SIRPA-203ENST00000400068 HYDINQ4G0P3 5121 aa6.95□□□□□ -1.3
SIRPA-203ENST00000400068 HECTD4Q9Y4D8 3996 aa6.93□□□□□ -1.3
SIRPA-203ENST00000400068 VPS13BQ7Z7G8 4022 aa6.92□□□□□ -1.3
SIRPA-203ENST00000400068 M0R2T5 61 aa6.91□□□□□ -1.3
SIRPA-203ENST00000400068 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
SIRPA-203ENST00000400068 MYCBP2O75592 4640 aa6.86□□□□□ -1.31
SIRPA-203ENST00000400068 PKHD1P08F94 4074 aa6.85□□□□□ -1.31
SIRPA-203ENST00000400068 PLAC4Q8WY50 150 aa6.84□□□□□ -1.32
SIRPA-203ENST00000400068 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
SIRPA-203ENST00000400068 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
SIRPA-203ENST00000400068 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
SIRPA-203ENST00000400068 KIAA1109Q2LD37 5005 aa6.8□□□□□ -1.32
SIRPA-203ENST00000400068 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
SIRPA-203ENST00000400068 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
SIRPA-203ENST00000400068 SACSQ9NZJ4 4579 aa6.75□□□□□ -1.33
SIRPA-203ENST00000400068 RYR1P21817 5038 aa6.74□□□□□ -1.33
SIRPA-203ENST00000400068 APOBP04114 4563 aaKnown RBP6.71□□□□□ -1.33
SIRPA-203ENST00000400068 FAT2Q9NYQ8 4349 aa6.71□□□□□ -1.34
SIRPA-203ENST00000400068 FAT3Q8TDW7 4589 aa6.7□□□□□ -1.34
SIRPA-203ENST00000400068 KMT2CQ8NEZ4 4911 aaKnown RBP6.67□□□□□ -1.34
SIRPA-203ENST00000400068 RYR3Q15413 4870 aa6.66□□□□□ -1.34
SIRPA-203ENST00000400068 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.35
SIRPA-203ENST00000400068 KRTAP17-1Q9BYP8 105 aa6.61□□□□□ -1.35
SIRPA-203ENST00000400068 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
SIRPA-203ENST00000400068 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
SIRPA-203ENST00000400068 PKD1P98161 4303 aa6.56□□□□□ -1.36
SIRPA-203ENST00000400068 RYR2Q92736 4967 aa6.56□□□□□ -1.36
SIRPA-203ENST00000400068 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
SIRPA-203ENST00000400068 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
SIRPA-203ENST00000400068 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
SIRPA-203ENST00000400068 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
SIRPA-203ENST00000400068 LRP2P98164 4655 aa6.39□□□□□ -1.39
SIRPA-203ENST00000400068 HSPG2P98160 4391 aa6.37□□□□□ -1.39
SIRPA-203ENST00000400068 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
SIRPA-203ENST00000400068 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
SIRPA-203ENST00000400068 KRTAP4-1Q9BYQ7 146 aa6.3□□□□□ -1.4
SIRPA-203ENST00000400068 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
SIRPA-203ENST00000400068 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
SIRPA-203ENST00000400068 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
SIRPA-203ENST00000400068 LPAP08519 4548 aa6.25□□□□□ -1.41
SIRPA-203ENST00000400068 TNP1P09430 55 aa6.24□□□□□ -1.41
SIRPA-203ENST00000400068 HERC2O95714 4834 aa6.23□□□□□ -1.41
SIRPA-203ENST00000400068 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
SIRPA-203ENST00000400068 TNXBP22105 4242 aa6.09□□□□□ -1.43
SIRPA-203ENST00000400068 INE1O15225 51 aa6.06□□□□□ -1.44
SIRPA-203ENST00000400068 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
SIRPA-203ENST00000400068 MUC2Q02817 5179 aa5.93□□□□□ -1.46
SIRPA-203ENST00000400068 BIRC6Q9NR09 4857 aa5.86□□□□□ -1.47
SIRPA-203ENST00000400068 HERC1Q15751 4861 aa5.84□□□□□ -1.47
SIRPA-203ENST00000400068 MT1HP80294 61 aa5.76□□□□□ -1.49
SIRPA-203ENST00000400068 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
SIRPA-203ENST00000400068 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
SIRPA-203ENST00000400068 PCLOQ9Y6V0 5065 aa5.71□□□□□ -1.5
SIRPA-203ENST00000400068 MT2AP02795 61 aa5.67□□□□□ -1.5
SIRPA-203ENST00000400068 MT1FP04733 61 aa5.67□□□□□ -1.5
SIRPA-203ENST00000400068 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
SIRPA-203ENST00000400068 UBR4Q5T4S7 5183 aa5.62□□□□□ -1.51
SIRPA-203ENST00000400068 KRTAP19-2Q3LHN2 52 aa5.61□□□□□ -1.51
SIRPA-203ENST00000400068 LCE2CQ5TA81 110 aa5.59□□□□□ -1.52
SIRPA-203ENST00000400068 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
SIRPA-203ENST00000400068 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
SIRPA-203ENST00000400068 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
SIRPA-203ENST00000400068 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
SIRPA-203ENST00000400068 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
SIRPA-203ENST00000400068 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.53
SIRPA-203ENST00000400068 KRTAP12-3P60328 96 aa5.44□□□□□ -1.54
SIRPA-203ENST00000400068 KRTAP9-8Q9BYQ0 159 aa5.42□□□□□ -1.54
SIRPA-203ENST00000400068 FSIP2Q5CZC0 6907 aa5.39□□□□□ -1.55
SIRPA-203ENST00000400068 MT1BP07438 61 aa5.29□□□□□ -1.56
SIRPA-203ENST00000400068 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
SIRPA-203ENST00000400068 MT1XP80297 61 aa5.25□□□□□ -1.57
SIRPA-203ENST00000400068 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
SIRPA-203ENST00000400068 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
SIRPA-203ENST00000400068 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
SIRPA-203ENST00000400068 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
SIRPA-203ENST00000400068 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.58
SIRPA-203ENST00000400068 KRTAP8-1Q8IUC2 63 aa5.14□□□□□ -1.59
SIRPA-203ENST00000400068 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
SIRPA-203ENST00000400068 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
SIRPA-203ENST00000400068 LCE2BO14633 110 aa5.11□□□□□ -1.59
SIRPA-203ENST00000400068 USH2AO75445 5202 aa5.1□□□□□ -1.59
SIRPA-203ENST00000400068 KMT2DO14686 5537 aa4.93□□□□□ -1.62
SIRPA-203ENST00000400068 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
SIRPA-203ENST00000400068 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
SIRPA-203ENST00000400068 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
SIRPA-203ENST00000400068 LCE2AQ5TA79 106 aaPredicted RBP4.86□□□□□ -1.63
SIRPA-203ENST00000400068 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
SIRPA-203ENST00000400068 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
SIRPA-203ENST00000400068 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
SIRPA-203ENST00000400068 MT1GP13640 62 aa4.64□□□□□ -1.67
SIRPA-203ENST00000400068 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
SIRPA-203ENST00000400068 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
SIRPA-203ENST00000400068 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
SIRPA-203ENST00000400068 MT1LQ93083 61 aa4.59□□□□□ -1.67
SIRPA-203ENST00000400068 MT1EP04732 61 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms