RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 P0C880 135 aa1.69□□□□□ -2.14
KNL1-202ENST00000399668 TPRXLQ17RH7 258 aa1.68□□□□□ -2.14
KNL1-202ENST00000399668 KRTAP13-3Q3SY46 172 aa1.67□□□□□ -2.14
KNL1-202ENST00000399668 KRTAP10-10P60014 251 aa1.66□□□□□ -2.14
KNL1-202ENST00000399668 FLGP20930 4061 aaPredicted RBP1.62□□□□□ -2.15
KNL1-202ENST00000399668 KRTAP12-2P59991 146 aa1.62□□□□□ -2.15
KNL1-202ENST00000399668 PP632Q6XCG6 107 aa1.61□□□□□ -2.15
KNL1-202ENST00000399668 HYDINQ4G0P3 5121 aa1.61□□□□□ -2.15
KNL1-202ENST00000399668 VPS13DQ5THJ4 4388 aa1.61□□□□□ -2.15
KNL1-202ENST00000399668 STARD9Q9P2P6 4700 aa1.61□□□□□ -2.15
KNL1-202ENST00000399668 FAT2Q9NYQ8 4349 aa1.6□□□□□ -2.15
KNL1-202ENST00000399668 PRO2289Q9P1D8 64 aa1.6□□□□□ -2.15
KNL1-202ENST00000399668 LCE2DQ5TA82 110 aaPredicted RBP1.6□□□□□ -2.15
KNL1-202ENST00000399668 RYR2Q92736 4967 aa1.6□□□□□ -2.15
KNL1-202ENST00000399668 DNAH11Q96DT5 4516 aa1.6□□□□□ -2.15
KNL1-202ENST00000399668 KRTAP3-3Q9BYR6 98 aa1.59□□□□□ -2.16
KNL1-202ENST00000399668 KRTAP3-2Q9BYR7 98 aa1.59□□□□□ -2.16
KNL1-202ENST00000399668 KRTAP12-1P59990 96 aa1.58□□□□□ -2.16
KNL1-202ENST00000399668 KRTAP3-1Q9BYR8 98 aa1.58□□□□□ -2.16
KNL1-202ENST00000399668 DNAH17Q9UFH2 4485 aa1.58□□□□□ -2.16
KNL1-202ENST00000399668 KRTAP19-4Q3LI73 84 aa1.58□□□□□ -2.16
KNL1-202ENST00000399668 FAT3Q8TDW7 4589 aa1.58□□□□□ -2.16
KNL1-202ENST00000399668 KIAA1109Q2LD37 5005 aa1.57□□□□□ -2.16
KNL1-202ENST00000399668 UBR4Q5T4S7 5183 aa1.56□□□□□ -2.16
KNL1-202ENST00000399668 DYNC2H1Q8NCM8 4307 aaKnown RBP1.56□□□□□ -2.16
KNL1-202ENST00000399668 PLECQ15149 4684 aaKnown RBP1.56□□□□□ -2.16
KNL1-202ENST00000399668 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
KNL1-202ENST00000399668 PKHD1L1Q86WI1 4243 aa1.54□□□□□ -2.16
KNL1-202ENST00000399668 KRTAP10-6P60371 365 aaPredicted RBP1.53□□□□□ -2.16
KNL1-202ENST00000399668 KRTAP4-5Q9BYR2 181 aa1.53□□□□□ -2.17
KNL1-202ENST00000399668 DNAH8Q96JB1 4490 aa1.53□□□□□ -2.17
KNL1-202ENST00000399668 PKD1P98161 4303 aa1.51□□□□□ -2.17
KNL1-202ENST00000399668 MT1HL1P0DM35 61 aa1.51□□□□□ -2.17
KNL1-202ENST00000399668 LRP1Q07954 4544 aaKnown RBP1.51□□□□□ -2.17
KNL1-202ENST00000399668 FAT1Q14517 4588 aa1.5□□□□□ -2.17
KNL1-202ENST00000399668 HSPG2P98160 4391 aa1.5□□□□□ -2.17
KNL1-202ENST00000399668 RYR3Q15413 4870 aa1.49□□□□□ -2.17
KNL1-202ENST00000399668 MYCBP2O75592 4640 aa1.48□□□□□ -2.17
KNL1-202ENST00000399668 KRTAP15-1Q3LI76 137 aa1.48□□□□□ -2.17
KNL1-202ENST00000399668 KRTAP10-4P60372 401 aaPredicted RBP1.47□□□□□ -2.17
KNL1-202ENST00000399668 GPR98Q8WXG9 6306 aa1.47□□□□□ -2.17
KNL1-202ENST00000399668 HMCN2Q8NDA2 5059 aa1.47□□□□□ -2.17
KNL1-202ENST00000399668 TNXBP22105 4242 aa1.47□□□□□ -2.17
KNL1-202ENST00000399668 LRP1BQ9NZR2 4599 aa1.46□□□□□ -2.18
KNL1-202ENST00000399668 LPAP08519 4548 aa1.45□□□□□ -2.18
KNL1-202ENST00000399668 KRTAP10-12P60413 245 aa1.43□□□□□ -2.18
KNL1-202ENST00000399668 FAT4Q6V0I7 4981 aa1.43□□□□□ -2.18
KNL1-202ENST00000399668 DNAH5Q8TE73 4624 aa1.43□□□□□ -2.18
KNL1-202ENST00000399668 ABCA13Q86UQ4 5058 aa1.43□□□□□ -2.18
KNL1-202ENST00000399668 KRTAP23-1A1A580 65 aa1.43□□□□□ -2.18
KNL1-202ENST00000399668 CRCT1Q9UGL9 99 aa1.42□□□□□ -2.18
KNL1-202ENST00000399668 LORP23490 312 aaPredicted RBP1.42□□□□□ -2.18
KNL1-202ENST00000399668 APOBP04114 4563 aaKnown RBP1.4□□□□□ -2.18
KNL1-202ENST00000399668 LCE3AQ5TA76 89 aa1.39□□□□□ -2.19
KNL1-202ENST00000399668 KRTAP12-3P60328 96 aa1.38□□□□□ -2.19
KNL1-202ENST00000399668 DYNC1H1Q14204 4646 aaKnown RBP1.38□□□□□ -2.19
KNL1-202ENST00000399668 KMT2CQ8NEZ4 4911 aaKnown RBP1.38□□□□□ -2.19
KNL1-202ENST00000399668 DNHD1Q96M86 4753 aa1.37□□□□□ -2.19
KNL1-202ENST00000399668 KRTAP4-1Q9BYQ7 146 aa1.37□□□□□ -2.19
KNL1-202ENST00000399668 LCE2BO14633 110 aa1.37□□□□□ -2.19
KNL1-202ENST00000399668 SSPOA2VEC9 5147 aa1.36□□□□□ -2.19
KNL1-202ENST00000399668 LRP2P98164 4655 aa1.36□□□□□ -2.19
KNL1-202ENST00000399668 SACSQ9NZJ4 4579 aa1.34□□□□□ -2.19
KNL1-202ENST00000399668 USH2AO75445 5202 aa1.33□□□□□ -2.2
KNL1-202ENST00000399668 INE1O15225 51 aa1.33□□□□□ -2.2
KNL1-202ENST00000399668 MT1HP80294 61 aa1.32□□□□□ -2.2
KNL1-202ENST00000399668 KRTAP8-1Q8IUC2 63 aa1.32□□□□□ -2.2
KNL1-202ENST00000399668 BIRC6Q9NR09 4857 aa1.31□□□□□ -2.2
KNL1-202ENST00000399668 SPRR2GQ9BYE4 73 aa1.3□□□□□ -2.2
KNL1-202ENST00000399668 KRTAP10-5P60370 271 aa1.29□□□□□ -2.2
KNL1-202ENST00000399668 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
KNL1-202ENST00000399668 RNF213Q63HN8 5207 aa1.29□□□□□ -2.2
KNL1-202ENST00000399668 HERC2O95714 4834 aa1.28□□□□□ -2.2
KNL1-202ENST00000399668 LCE2CQ5TA81 110 aa1.28□□□□□ -2.2
KNL1-202ENST00000399668 KMT2DO14686 5537 aa1.27□□□□□ -2.21
KNL1-202ENST00000399668 MT2AP02795 61 aa1.27□□□□□ -2.21
KNL1-202ENST00000399668 MT1FP04733 61 aa1.27□□□□□ -2.21
KNL1-202ENST00000399668 MDN1Q9NU22 5596 aa1.27□□□□□ -2.21
KNL1-202ENST00000399668 KRTAP19-5Q3LI72 72 aa1.25□□□□□ -2.21
KNL1-202ENST00000399668 LCE2AQ5TA79 106 aaPredicted RBP1.25□□□□□ -2.21
KNL1-202ENST00000399668 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
KNL1-202ENST00000399668 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
KNL1-202ENST00000399668 KRTAP10-7P60409 375 aaPredicted RBP1.23□□□□□ -2.21
KNL1-202ENST00000399668 KRTAP19-1Q8IUB9 90 aa1.22□□□□□ -2.21
KNL1-202ENST00000399668 LCE3CQ5T5A8 94 aa1.22□□□□□ -2.21
KNL1-202ENST00000399668 MUC17Q685J3 4493 aa1.22□□□□□ -2.21
KNL1-202ENST00000399668 KRTAP9-8Q9BYQ0 159 aa1.2□□□□□ -2.22
KNL1-202ENST00000399668 MT1XP80297 61 aa1.18□□□□□ -2.22
KNL1-202ENST00000399668 HERC1Q15751 4861 aa1.18□□□□□ -2.22
KNL1-202ENST00000399668 KRTAP4-8A0A0G2JLE6 195 aa1.18□□□□□ -2.22
KNL1-202ENST00000399668 KRTAP4-8Q9BYQ9 185 aa1.18□□□□□ -2.22
KNL1-202ENST00000399668 LCE3BQ5TA77 95 aa1.17□□□□□ -2.22
KNL1-202ENST00000399668 KRTAP19-8Q3LI54 63 aa1.16□□□□□ -2.22
KNL1-202ENST00000399668 SPRR2EP22531 72 aa1.15□□□□□ -2.23
KNL1-202ENST00000399668 SPRR2BP35325 72 aa1.15□□□□□ -2.23
KNL1-202ENST00000399668 SPRR2AP35326 72 aa1.15□□□□□ -2.23
KNL1-202ENST00000399668 MT1BP07438 61 aa1.15□□□□□ -2.23
KNL1-202ENST00000399668 MT1GP13640 62 aa1.14□□□□□ -2.23
KNL1-202ENST00000399668 KRTAP9-3Q9BYQ3 159 aa1.13□□□□□ -2.23
KNL1-202ENST00000399668 MT3P25713 68 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms