RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ATXN8Q156A1 80 aa7.37□□□□□ -1.23
UFD1-202ENST00000399523 PYY3Q5JQD4 70 aa7.36□□□□□ -1.23
UFD1-202ENST00000399523 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
UFD1-202ENST00000399523 Q8N9L7 120 aa7.33□□□□□ -1.24
UFD1-202ENST00000399523 A8MUN3 132 aa7.32□□□□□ -1.24
UFD1-202ENST00000399523 TSTD3H0UI37 97 aa7.32□□□□□ -1.24
UFD1-202ENST00000399523 H0YAA0 97 aa7.31□□□□□ -1.24
UFD1-202ENST00000399523 A0A087WVE0 104 aa7.3□□□□□ -1.24
UFD1-202ENST00000399523 PCP4L1A6NKN8 68 aa7.29□□□□□ -1.24
UFD1-202ENST00000399523 KRTAP4-9Q9BYQ8 210 aa7.28□□□□□ -1.24
UFD1-202ENST00000399523 KRTAP10-7P60409 375 aaPredicted RBP7.2□□□□□ -1.26
UFD1-202ENST00000399523 KRTAP10-12P60413 245 aa7.19□□□□□ -1.26
UFD1-202ENST00000399523 UQCR10Q9UDW1 63 aa7.18□□□□□ -1.26
UFD1-202ENST00000399523 ADM2Q7Z4H4 148 aa7.17□□□□□ -1.26
UFD1-202ENST00000399523 NAA38Q9BRA0 125 aaKnown RBP7.17□□□□□ -1.26
UFD1-202ENST00000399523 NDUFC1O43677 76 aa7.15□□□□□ -1.26
UFD1-202ENST00000399523 CYP4F30PQ9H0H9 118 aa7.12□□□□□ -1.27
UFD1-202ENST00000399523 TP53AIP1Q9HCN2 124 aa7.11□□□□□ -1.27
UFD1-202ENST00000399523 M0R143 59 aa7.1□□□□□ -1.27
UFD1-202ENST00000399523 R4GN34 69 aa7.05□□□□□ -1.28
UFD1-202ENST00000399523 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
UFD1-202ENST00000399523 COL5A1-AS1Q5SY13 56 aa7.02□□□□□ -1.29
UFD1-202ENST00000399523 H3BT86 120 aa7.01□□□□□ -1.29
UFD1-202ENST00000399523 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
UFD1-202ENST00000399523 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
UFD1-202ENST00000399523 K7EP34 96 aa6.97□□□□□ -1.29
UFD1-202ENST00000399523 M0QZ58 72 aa6.95□□□□□ -1.3
UFD1-202ENST00000399523 BATFQ16520 125 aa6.95□□□□□ -1.3
UFD1-202ENST00000399523 AHNAK2Q8IVF2 5795 aa6.95□□□□□ -1.3
UFD1-202ENST00000399523 LOC101927531A0A1B0GV80 90 aa6.93□□□□□ -1.3
UFD1-202ENST00000399523 A0A1B0GV90 55 aa6.93□□□□□ -1.3
UFD1-202ENST00000399523 P0C880 135 aa6.93□□□□□ -1.3
UFD1-202ENST00000399523 KRTAP5-10Q6L8G5 202 aa6.91□□□□□ -1.3
UFD1-202ENST00000399523 UBL5Q9BZL1 73 aa6.91□□□□□ -1.3
UFD1-202ENST00000399523 C20orf197Q8N268 126 aa6.89□□□□□ -1.31
UFD1-202ENST00000399523 TRAV22A0A0B4J277 110 aa6.88□□□□□ -1.31
UFD1-202ENST00000399523 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
UFD1-202ENST00000399523 ACYP1P07311 99 aa6.87□□□□□ -1.31
UFD1-202ENST00000399523 TAX1BP3O14907 124 aa6.84□□□□□ -1.31
UFD1-202ENST00000399523 MT4P47944 62 aa6.84□□□□□ -1.31
UFD1-202ENST00000399523 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
UFD1-202ENST00000399523 KRTAP19-3Q7Z4W3 81 aa6.84□□□□□ -1.31
UFD1-202ENST00000399523 C9orf118A6NHY6 69 aa6.81□□□□□ -1.32
UFD1-202ENST00000399523 GTF2H5Q6ZYL4 71 aa6.8□□□□□ -1.32
UFD1-202ENST00000399523 KRTAP19-7Q3SYF9 63 aa6.78□□□□□ -1.32
UFD1-202ENST00000399523 A0A1W2PPM0 123 aa6.76□□□□□ -1.33
UFD1-202ENST00000399523 MT1EP04732 61 aa6.75□□□□□ -1.33
UFD1-202ENST00000399523 KRTAP5-7Q6L8G8 165 aa6.74□□□□□ -1.33
UFD1-202ENST00000399523 SPCS1Q9Y6A9 102 aa6.74□□□□□ -1.33
UFD1-202ENST00000399523 CYSTM1Q9H1C7 97 aa6.73□□□□□ -1.33
UFD1-202ENST00000399523 ATOX1O00244 68 aa6.66□□□□□ -1.34
UFD1-202ENST00000399523 F8W1H4 67 aa6.65□□□□□ -1.34
UFD1-202ENST00000399523 H0Y9P7 68 aa6.65□□□□□ -1.34
UFD1-202ENST00000399523 K7ERU9 68 aa6.62□□□□□ -1.35
UFD1-202ENST00000399523 UQCRQO14949 82 aa6.62□□□□□ -1.35
UFD1-202ENST00000399523 KRTAP5-4Q6L8H1 288 aa6.62□□□□□ -1.35
UFD1-202ENST00000399523 MT1GP13640 62 aa6.61□□□□□ -1.35
UFD1-202ENST00000399523 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
UFD1-202ENST00000399523 J3QR89 54 aa6.59□□□□□ -1.35
UFD1-202ENST00000399523 MT-ATP8P03928 68 aa6.58□□□□□ -1.36
UFD1-202ENST00000399523 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
UFD1-202ENST00000399523 PRO0461Q9UI25 63 aa6.56□□□□□ -1.36
UFD1-202ENST00000399523 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
UFD1-202ENST00000399523 ETDBQ3ZM63 59 aa6.49□□□□□ -1.37
UFD1-202ENST00000399523 LINC00208Q96KT6 92 aa6.48□□□□□ -1.37
UFD1-202ENST00000399523 MT1MQ8N339 61 aa6.47□□□□□ -1.37
UFD1-202ENST00000399523 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
UFD1-202ENST00000399523 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
UFD1-202ENST00000399523 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
UFD1-202ENST00000399523 FAM240AA0A1B0GVK7 77 aa6.39□□□□□ -1.39
UFD1-202ENST00000399523 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
UFD1-202ENST00000399523 SCGB1A1P11684 91 aa6.35□□□□□ -1.39
UFD1-202ENST00000399523 HIST1H4AP62805 103 aaKnown RBP6.34□□□□□ -1.39
UFD1-202ENST00000399523 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
UFD1-202ENST00000399523 MT1LQ93083 61 aa6.33□□□□□ -1.4
UFD1-202ENST00000399523 MP68P56378 58 aa6.32□□□□□ -1.4
UFD1-202ENST00000399523 A0A0D9SG42 100 aa6.29□□□□□ -1.4
UFD1-202ENST00000399523 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
UFD1-202ENST00000399523 ATP5EP2Q5VTU8 51 aa6.28□□□□□ -1.4
UFD1-202ENST00000399523 KRTAP20-2Q3LI61 65 aa6.27□□□□□ -1.41
UFD1-202ENST00000399523 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
UFD1-202ENST00000399523 TRAV7A0A075B6U4 112 aa6.25□□□□□ -1.41
UFD1-202ENST00000399523 PCP4P48539 62 aa6.25□□□□□ -1.41
UFD1-202ENST00000399523 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
UFD1-202ENST00000399523 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
UFD1-202ENST00000399523 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
UFD1-202ENST00000399523 H3BPC8 53 aa6.16□□□□□ -1.42
UFD1-202ENST00000399523 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
UFD1-202ENST00000399523 ACYP2P14621 99 aa6.1□□□□□ -1.43
UFD1-202ENST00000399523 ANAPC13Q9BS18 74 aa6.08□□□□□ -1.44
UFD1-202ENST00000399523 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
UFD1-202ENST00000399523 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
UFD1-202ENST00000399523 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
UFD1-202ENST00000399523 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
UFD1-202ENST00000399523 SMIM20Q8N5G0 67 aa5.97□□□□□ -1.45
UFD1-202ENST00000399523 CHKB-CPT1BH3BT56 60 aa5.94□□□□□ -1.46
UFD1-202ENST00000399523 SERP2Q8N6R1 65 aa5.93□□□□□ -1.46
UFD1-202ENST00000399523 COX7CP15954 63 aa5.92□□□□□ -1.46
UFD1-202ENST00000399523 AHNAKQ09666 5890 aaKnown RBP5.92□□□□□ -1.46
UFD1-202ENST00000399523 KRTAP4-11Q9BYQ6 195 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms