RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
TTC3-204ENST00000399017 VPS13BQ7Z7G8 4022 aa2.27□□□□□ -2.05
TTC3-204ENST00000399017 KMT2AQ03164 3969 aa2.27□□□□□ -2.05
TTC3-204ENST00000399017 DNAH1Q9P2D7 4330 aa2.26□□□□□ -2.05
TTC3-204ENST00000399017 DNAH3Q8TD57 4116 aa2.26□□□□□ -2.05
TTC3-204ENST00000399017 DNAH7Q8WXX0 4024 aa2.25□□□□□ -2.05
TTC3-204ENST00000399017 ANK2Q01484 3957 aa2.25□□□□□ -2.05
TTC3-204ENST00000399017 KRTAP3-3Q9BYR6 98 aa2.24□□□□□ -2.05
TTC3-204ENST00000399017 KRTAP3-2Q9BYR7 98 aa2.24□□□□□ -2.05
TTC3-204ENST00000399017 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
TTC3-204ENST00000399017 ALMS1Q8TCU4 4167 aa2.2□□□□□ -2.06
TTC3-204ENST00000399017 KRTAP10-5P60370 271 aa2.2□□□□□ -2.06
TTC3-204ENST00000399017 MT3P25713 68 aa2.2□□□□□ -2.06
TTC3-204ENST00000399017 SPRR2FQ96RM1 72 aa2.18□□□□□ -2.06
TTC3-204ENST00000399017 SPRR2EP22531 72 aa2.17□□□□□ -2.06
TTC3-204ENST00000399017 SPRR2BP35325 72 aa2.17□□□□□ -2.06
TTC3-204ENST00000399017 SPRR2AP35326 72 aa2.17□□□□□ -2.06
TTC3-204ENST00000399017 DNAH6Q9C0G6 4158 aa2.17□□□□□ -2.06
TTC3-204ENST00000399017 HECTD4Q9Y4D8 3996 aa2.15□□□□□ -2.06
TTC3-204ENST00000399017 FLGP20930 4061 aaPredicted RBP2.14□□□□□ -2.07
TTC3-204ENST00000399017 MT1HL1P0DM35 61 aa2.14□□□□□ -2.07
TTC3-204ENST00000399017 ANK3Q12955 4377 aaKnown RBP2.14□□□□□ -2.07
TTC3-204ENST00000399017 DNAH2Q9P225 4427 aa2.11□□□□□ -2.07
TTC3-204ENST00000399017 SPRR2DP22532 72 aa2.11□□□□□ -2.07
TTC3-204ENST00000399017 PRKDCP78527 4128 aaKnown RBP2.1□□□□□ -2.07
TTC3-204ENST00000399017 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
TTC3-204ENST00000399017 DYNC2H1Q8NCM8 4307 aaKnown RBP2.06□□□□□ -2.08
TTC3-204ENST00000399017 KRTAP3-1Q9BYR8 98 aa2.06□□□□□ -2.08
TTC3-204ENST00000399017 LCE2BO14633 110 aa2.05□□□□□ -2.08
TTC3-204ENST00000399017 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
TTC3-204ENST00000399017 KRTAP4-5Q9BYR2 181 aa2.04□□□□□ -2.08
TTC3-204ENST00000399017 LCE2CQ5TA81 110 aa2.03□□□□□ -2.08
TTC3-204ENST00000399017 FAT2Q9NYQ8 4349 aa2.01□□□□□ -2.09
TTC3-204ENST00000399017 KRTAP10-4P60372 401 aaPredicted RBP2□□□□□ -2.09
TTC3-204ENST00000399017 LCE2DQ5TA82 110 aaPredicted RBP1.99□□□□□ -2.09
TTC3-204ENST00000399017 PCLOQ9Y6V0 5065 aa1.97□□□□□ -2.09
TTC3-204ENST00000399017 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
TTC3-204ENST00000399017 MT1HP80294 61 aa1.96□□□□□ -2.1
TTC3-204ENST00000399017 PKHD1P08F94 4074 aa1.96□□□□□ -2.1
TTC3-204ENST00000399017 DNAH9Q9NYC9 4486 aa1.92□□□□□ -2.1
TTC3-204ENST00000399017 HYDINQ4G0P3 5121 aa1.92□□□□□ -2.1
TTC3-204ENST00000399017 VPS13DQ5THJ4 4388 aa1.91□□□□□ -2.1
TTC3-204ENST00000399017 PKHD1L1Q86WI1 4243 aa1.9□□□□□ -2.11
TTC3-204ENST00000399017 LCE3CQ5T5A8 94 aa1.89□□□□□ -2.11
TTC3-204ENST00000399017 MT4P47944 62 aa1.89□□□□□ -2.11
TTC3-204ENST00000399017 KRTAP20-1Q3LI63 56 aa1.86□□□□□ -2.11
TTC3-204ENST00000399017 KRTAP9-6A0A140TA67 174 aa1.86□□□□□ -2.11
TTC3-204ENST00000399017 MT2AP02795 61 aa1.84□□□□□ -2.11
TTC3-204ENST00000399017 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
TTC3-204ENST00000399017 DNAH17Q9UFH2 4485 aa1.84□□□□□ -2.12
TTC3-204ENST00000399017 LCE3BQ5TA77 95 aa1.83□□□□□ -2.12
TTC3-204ENST00000399017 KRTAP9-2Q9BYQ4 174 aa1.83□□□□□ -2.12
TTC3-204ENST00000399017 PKD1P98161 4303 aa1.83□□□□□ -2.12
TTC3-204ENST00000399017 UBR4Q5T4S7 5183 aa1.83□□□□□ -2.12
TTC3-204ENST00000399017 RNF213Q63HN8 5207 aa1.83□□□□□ -2.12
TTC3-204ENST00000399017 DNAH10Q8IVF4 4471 aa1.82□□□□□ -2.12
TTC3-204ENST00000399017 MT1GP13640 62 aa1.82□□□□□ -2.12
TTC3-204ENST00000399017 DNHD1Q96M86 4753 aa1.81□□□□□ -2.12
TTC3-204ENST00000399017 ABCA13Q86UQ4 5058 aa1.79□□□□□ -2.12
TTC3-204ENST00000399017 LCE5AQ5TCM9 118 aa1.79□□□□□ -2.12
TTC3-204ENST00000399017 DNAH8Q96JB1 4490 aa1.79□□□□□ -2.12
TTC3-204ENST00000399017 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
TTC3-204ENST00000399017 DNAH11Q96DT5 4516 aa1.78□□□□□ -2.12
TTC3-204ENST00000399017 MT1FP04733 61 aa1.78□□□□□ -2.12
TTC3-204ENST00000399017 EPPK1P58107 5090 aaKnown RBP1.78□□□□□ -2.12
TTC3-204ENST00000399017 TNXBP22105 4242 aa1.78□□□□□ -2.13
TTC3-204ENST00000399017 RYR1P21817 5038 aa1.77□□□□□ -2.13
TTC3-204ENST00000399017 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
TTC3-204ENST00000399017 KRTAP9-7A8MTY7 169 aa1.77□□□□□ -2.13
TTC3-204ENST00000399017 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
TTC3-204ENST00000399017 LCE1EQ5T753 118 aa1.76□□□□□ -2.13
TTC3-204ENST00000399017 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
TTC3-204ENST00000399017 LCE1AQ5T7P2 110 aa1.76□□□□□ -2.13
TTC3-204ENST00000399017 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
TTC3-204ENST00000399017 RYR3Q15413 4870 aa1.76□□□□□ -2.13
TTC3-204ENST00000399017 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
TTC3-204ENST00000399017 LCE1DQ5T752 114 aa1.73□□□□□ -2.13
TTC3-204ENST00000399017 KRTAP19-1Q8IUB9 90 aa1.73□□□□□ -2.13
TTC3-204ENST00000399017 STARD9Q9P2P6 4700 aa1.72□□□□□ -2.13
TTC3-204ENST00000399017 KRTAP19-8Q3LI54 63 aa1.72□□□□□ -2.13
TTC3-204ENST00000399017 KRTAP17-1Q9BYP8 105 aa1.72□□□□□ -2.13
TTC3-204ENST00000399017 KRTAP4-1Q9BYQ7 146 aa1.69□□□□□ -2.14
TTC3-204ENST00000399017 FAT3Q8TDW7 4589 aa1.69□□□□□ -2.14
TTC3-204ENST00000399017 KIAA1109Q2LD37 5005 aa1.69□□□□□ -2.14
TTC3-204ENST00000399017 FSIP2Q5CZC0 6907 aa1.68□□□□□ -2.14
TTC3-204ENST00000399017 HSPG2P98160 4391 aa1.68□□□□□ -2.14
TTC3-204ENST00000399017 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
TTC3-204ENST00000399017 LRP1BQ9NZR2 4599 aa1.67□□□□□ -2.14
TTC3-204ENST00000399017 MT1LQ93083 61 aa1.67□□□□□ -2.14
TTC3-204ENST00000399017 KRTAP2-3P0C7H8 128 aa1.67□□□□□ -2.14
TTC3-204ENST00000399017 KRTAP2-4Q9BYR9 128 aa1.67□□□□□ -2.14
TTC3-204ENST00000399017 APOBP04114 4563 aaKnown RBP1.67□□□□□ -2.14
TTC3-204ENST00000399017 SACSQ9NZJ4 4579 aa1.67□□□□□ -2.14
TTC3-204ENST00000399017 FAT1Q14517 4588 aa1.66□□□□□ -2.14
TTC3-204ENST00000399017 PLECQ15149 4684 aaKnown RBP1.65□□□□□ -2.15
TTC3-204ENST00000399017 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.15
TTC3-204ENST00000399017 KRTAP19-6Q3LI70 58 aa1.64□□□□□ -2.15
TTC3-204ENST00000399017 HMCN2Q8NDA2 5059 aa1.64□□□□□ -2.15
TTC3-204ENST00000399017 LCE2AQ5TA79 106 aaPredicted RBP1.63□□□□□ -2.15
TTC3-204ENST00000399017 RYR2Q92736 4967 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms