RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 XP32Q5T750 250 aa4.84□□□□□ -1.63
CDH23-203ENST00000398788 HYDINQ4G0P3 5121 aa4.84□□□□□ -1.64
CDH23-203ENST00000398788 ALMS1Q8TCU4 4167 aa4.84□□□□□ -1.64
CDH23-203ENST00000398788 DNAH6Q9C0G6 4158 aa4.83□□□□□ -1.64
CDH23-203ENST00000398788 DNAH17Q9UFH2 4485 aa4.83□□□□□ -1.64
CDH23-203ENST00000398788 KRTAP12-2P59991 146 aa4.79□□□□□ -1.64
CDH23-203ENST00000398788 KRTAP10-8P60410 259 aa4.79□□□□□ -1.64
CDH23-203ENST00000398788 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
CDH23-203ENST00000398788 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
CDH23-203ENST00000398788 SACSQ9NZJ4 4579 aa4.76□□□□□ -1.65
CDH23-203ENST00000398788 PKD1P98161 4303 aa4.76□□□□□ -1.65
CDH23-203ENST00000398788 VPS13BQ7Z7G8 4022 aa4.75□□□□□ -1.65
CDH23-203ENST00000398788 KMT2CQ8NEZ4 4911 aaKnown RBP4.73□□□□□ -1.65
CDH23-203ENST00000398788 TNP1P09430 55 aa4.73□□□□□ -1.65
CDH23-203ENST00000398788 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
CDH23-203ENST00000398788 RYR3Q15413 4870 aa4.68□□□□□ -1.66
CDH23-203ENST00000398788 RYR2Q92736 4967 aa4.68□□□□□ -1.66
CDH23-203ENST00000398788 DNAH11Q96DT5 4516 aa4.67□□□□□ -1.66
CDH23-203ENST00000398788 PKHD1P08F94 4074 aa4.67□□□□□ -1.66
CDH23-203ENST00000398788 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
CDH23-203ENST00000398788 DNAH5Q8TE73 4624 aa4.66□□□□□ -1.66
CDH23-203ENST00000398788 KRTAP3-3Q9BYR6 98 aa4.65□□□□□ -1.66
CDH23-203ENST00000398788 KRTAP3-2Q9BYR7 98 aa4.65□□□□□ -1.66
CDH23-203ENST00000398788 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
CDH23-203ENST00000398788 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
CDH23-203ENST00000398788 DYNC1H1Q14204 4646 aaKnown RBP4.54□□□□□ -1.68
CDH23-203ENST00000398788 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
CDH23-203ENST00000398788 FAT3Q8TDW7 4589 aa4.49□□□□□ -1.69
CDH23-203ENST00000398788 EPPK1P58107 5090 aaKnown RBP4.48□□□□□ -1.69
CDH23-203ENST00000398788 LCE2DQ5TA82 110 aaPredicted RBP4.46□□□□□ -1.69
CDH23-203ENST00000398788 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.7
CDH23-203ENST00000398788 MYCBP2O75592 4640 aa4.44□□□□□ -1.7
CDH23-203ENST00000398788 FAT1Q14517 4588 aa4.44□□□□□ -1.7
CDH23-203ENST00000398788 PKHD1L1Q86WI1 4243 aa4.43□□□□□ -1.7
CDH23-203ENST00000398788 KIAA1109Q2LD37 5005 aa4.43□□□□□ -1.7
CDH23-203ENST00000398788 MT1HL1P0DM35 61 aa4.41□□□□□ -1.7
CDH23-203ENST00000398788 HSPG2P98160 4391 aa4.4□□□□□ -1.71
CDH23-203ENST00000398788 RYR1P21817 5038 aa4.38□□□□□ -1.71
CDH23-203ENST00000398788 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
CDH23-203ENST00000398788 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
CDH23-203ENST00000398788 KRTAP17-1Q9BYP8 105 aa4.36□□□□□ -1.71
CDH23-203ENST00000398788 KRTAP10-4P60372 401 aaPredicted RBP4.35□□□□□ -1.71
CDH23-203ENST00000398788 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
CDH23-203ENST00000398788 LPAP08519 4548 aa4.29□□□□□ -1.72
CDH23-203ENST00000398788 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
CDH23-203ENST00000398788 TNXBP22105 4242 aa4.24□□□□□ -1.73
CDH23-203ENST00000398788 HERC2O95714 4834 aa4.24□□□□□ -1.73
CDH23-203ENST00000398788 INE1O15225 51 aa4.22□□□□□ -1.73
CDH23-203ENST00000398788 ABCA13Q86UQ4 5058 aa4.21□□□□□ -1.73
CDH23-203ENST00000398788 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.74
CDH23-203ENST00000398788 LORP23490 312 aaPredicted RBP4.12□□□□□ -1.75
CDH23-203ENST00000398788 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
CDH23-203ENST00000398788 HERC1Q15751 4861 aa4.02□□□□□ -1.77
CDH23-203ENST00000398788 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
CDH23-203ENST00000398788 LCE2BO14633 110 aa3.98□□□□□ -1.77
CDH23-203ENST00000398788 LCE2CQ5TA81 110 aa3.97□□□□□ -1.77
CDH23-203ENST00000398788 MUC2Q02817 5179 aa3.97□□□□□ -1.77
CDH23-203ENST00000398788 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
CDH23-203ENST00000398788 LRP2P98164 4655 aa3.92□□□□□ -1.78
CDH23-203ENST00000398788 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
CDH23-203ENST00000398788 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
CDH23-203ENST00000398788 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
CDH23-203ENST00000398788 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
CDH23-203ENST00000398788 LCE2AQ5TA79 106 aaPredicted RBP3.86□□□□□ -1.79
CDH23-203ENST00000398788 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
CDH23-203ENST00000398788 MUC17Q685J3 4493 aa3.83□□□□□ -1.8
CDH23-203ENST00000398788 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
CDH23-203ENST00000398788 MT1HP80294 61 aa3.79□□□□□ -1.8
CDH23-203ENST00000398788 FLGP20930 4061 aaPredicted RBP3.77□□□□□ -1.81
CDH23-203ENST00000398788 RNF213Q63HN8 5207 aa3.73□□□□□ -1.81
CDH23-203ENST00000398788 MT2AP02795 61 aa3.72□□□□□ -1.81
CDH23-203ENST00000398788 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
CDH23-203ENST00000398788 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
CDH23-203ENST00000398788 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
CDH23-203ENST00000398788 MT1FP04733 61 aa3.64□□□□□ -1.83
CDH23-203ENST00000398788 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
CDH23-203ENST00000398788 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
CDH23-203ENST00000398788 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
CDH23-203ENST00000398788 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
CDH23-203ENST00000398788 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.85
CDH23-203ENST00000398788 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
CDH23-203ENST00000398788 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
CDH23-203ENST00000398788 KRTAP19-1Q8IUB9 90 aa3.46□□□□□ -1.86
CDH23-203ENST00000398788 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
CDH23-203ENST00000398788 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
CDH23-203ENST00000398788 KRTAP9-8Q9BYQ0 159 aa3.41□□□□□ -1.86
CDH23-203ENST00000398788 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
CDH23-203ENST00000398788 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.88
CDH23-203ENST00000398788 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.88
CDH23-203ENST00000398788 MT1BP07438 61 aa3.33□□□□□ -1.88
CDH23-203ENST00000398788 KRTAP9-3Q9BYQ3 159 aa3.32□□□□□ -1.88
CDH23-203ENST00000398788 MT1XP80297 61 aa3.31□□□□□ -1.88
CDH23-203ENST00000398788 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
CDH23-203ENST00000398788 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
CDH23-203ENST00000398788 SPRR2EP22531 72 aa3.23□□□□□ -1.89
CDH23-203ENST00000398788 SPRR2BP35325 72 aa3.23□□□□□ -1.89
CDH23-203ENST00000398788 SPRR2AP35326 72 aa3.23□□□□□ -1.89
CDH23-203ENST00000398788 MT1GP13640 62 aa3.22□□□□□ -1.89
CDH23-203ENST00000398788 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
CDH23-203ENST00000398788 USH2AO75445 5202 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms