RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 H0YAA0 97 aa5.46□□□□□ -1.54
PTCHD4-202ENST00000398738 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
PTCHD4-202ENST00000398738 KRTAP10-1P60331 282 aa5.44□□□□□ -1.54
PTCHD4-202ENST00000398738 A0A1B0GU33 70 aa5.42□□□□□ -1.54
PTCHD4-202ENST00000398738 LINC00304Q8N9R0 145 aa5.42□□□□□ -1.54
PTCHD4-202ENST00000398738 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
PTCHD4-202ENST00000398738 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
PTCHD4-202ENST00000398738 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
PTCHD4-202ENST00000398738 A8MUU9 505 aa5.39□□□□□ -1.55
PTCHD4-202ENST00000398738 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
PTCHD4-202ENST00000398738 SACSQ9NZJ4 4579 aa5.39□□□□□ -1.55
PTCHD4-202ENST00000398738 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
PTCHD4-202ENST00000398738 VPS13BQ7Z7G8 4022 aa5.37□□□□□ -1.55
PTCHD4-202ENST00000398738 SMR3BP02814 79 aaPredicted RBP5.36□□□□□ -1.55
PTCHD4-202ENST00000398738 RYR2Q92736 4967 aa5.35□□□□□ -1.55
PTCHD4-202ENST00000398738 KMT2CQ8NEZ4 4911 aaKnown RBP5.35□□□□□ -1.55
PTCHD4-202ENST00000398738 H1FX-AS1Q4G0G2 97 aa5.34□□□□□ -1.55
PTCHD4-202ENST00000398738 A0A0D9SG42 100 aa5.33□□□□□ -1.56
PTCHD4-202ENST00000398738 ROMO1P60602 79 aa5.33□□□□□ -1.56
PTCHD4-202ENST00000398738 HYDINQ4G0P3 5121 aa5.32□□□□□ -1.56
PTCHD4-202ENST00000398738 FAT2Q9NYQ8 4349 aa5.32□□□□□ -1.56
PTCHD4-202ENST00000398738 K7ERS5 55 aa5.32□□□□□ -1.56
PTCHD4-202ENST00000398738 RYR3Q15413 4870 aa5.32□□□□□ -1.56
PTCHD4-202ENST00000398738 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
PTCHD4-202ENST00000398738 FAT1Q14517 4588 aa5.26□□□□□ -1.57
PTCHD4-202ENST00000398738 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
PTCHD4-202ENST00000398738 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.57
PTCHD4-202ENST00000398738 PKHD1P08F94 4074 aa5.21□□□□□ -1.57
PTCHD4-202ENST00000398738 P0C880 135 aa5.21□□□□□ -1.58
PTCHD4-202ENST00000398738 PKD1P98161 4303 aa5.19□□□□□ -1.58
PTCHD4-202ENST00000398738 C20orf166-AS1Q96NR2 134 aa5.18□□□□□ -1.58
PTCHD4-202ENST00000398738 RPL37P61927 97 aaKnown RBP5.16□□□□□ -1.58
PTCHD4-202ENST00000398738 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
PTCHD4-202ENST00000398738 MYCBP2O75592 4640 aa5.15□□□□□ -1.59
PTCHD4-202ENST00000398738 TPRXLQ17RH7 258 aa5.14□□□□□ -1.59
PTCHD4-202ENST00000398738 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
PTCHD4-202ENST00000398738 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
PTCHD4-202ENST00000398738 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
PTCHD4-202ENST00000398738 DYNC1H1Q14204 4646 aaKnown RBP5.12□□□□□ -1.59
PTCHD4-202ENST00000398738 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
PTCHD4-202ENST00000398738 EPPK1P58107 5090 aaKnown RBP5.1□□□□□ -1.59
PTCHD4-202ENST00000398738 A0A1B0GVY2 172 aa5.09□□□□□ -1.59
PTCHD4-202ENST00000398738 NDUFAF8A1L188 74 aa5.09□□□□□ -1.59
PTCHD4-202ENST00000398738 RPS29P62273 56 aaKnown RBP5.07□□□□□ -1.6
PTCHD4-202ENST00000398738 BIRC6Q9NR09 4857 aa5.06□□□□□ -1.6
PTCHD4-202ENST00000398738 KRTAP10-8P60410 259 aa5.05□□□□□ -1.6
PTCHD4-202ENST00000398738 LRP1Q07954 4544 aaKnown RBP5.04□□□□□ -1.6
PTCHD4-202ENST00000398738 S4R3F8 94 aa5.03□□□□□ -1.6
PTCHD4-202ENST00000398738 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
PTCHD4-202ENST00000398738 HSPG2P98160 4391 aa5.01□□□□□ -1.61
PTCHD4-202ENST00000398738 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
PTCHD4-202ENST00000398738 APOBP04114 4563 aaKnown RBP4.99□□□□□ -1.61
PTCHD4-202ENST00000398738 HERC2O95714 4834 aa4.96□□□□□ -1.62
PTCHD4-202ENST00000398738 PKHD1L1Q86WI1 4243 aa4.94□□□□□ -1.62
PTCHD4-202ENST00000398738 RYR1P21817 5038 aa4.94□□□□□ -1.62
PTCHD4-202ENST00000398738 KRTAP10-4P60372 401 aaPredicted RBP4.93□□□□□ -1.62
PTCHD4-202ENST00000398738 FAT3Q8TDW7 4589 aa4.92□□□□□ -1.62
PTCHD4-202ENST00000398738 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
PTCHD4-202ENST00000398738 LPAP08519 4548 aa4.9□□□□□ -1.62
PTCHD4-202ENST00000398738 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
PTCHD4-202ENST00000398738 KRTAP4-5Q9BYR2 181 aa4.89□□□□□ -1.63
PTCHD4-202ENST00000398738 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
PTCHD4-202ENST00000398738 KIAA1109Q2LD37 5005 aa4.85□□□□□ -1.63
PTCHD4-202ENST00000398738 LRP2P98164 4655 aa4.82□□□□□ -1.64
PTCHD4-202ENST00000398738 M0QZ58 72 aa4.81□□□□□ -1.64
PTCHD4-202ENST00000398738 Q5VSD8 79 aa4.8□□□□□ -1.64
PTCHD4-202ENST00000398738 TNXBP22105 4242 aa4.78□□□□□ -1.64
PTCHD4-202ENST00000398738 R4GN34 69 aa4.76□□□□□ -1.65
PTCHD4-202ENST00000398738 ABCA13Q86UQ4 5058 aa4.75□□□□□ -1.65
PTCHD4-202ENST00000398738 PCLOQ9Y6V0 5065 aa4.71□□□□□ -1.65
PTCHD4-202ENST00000398738 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
PTCHD4-202ENST00000398738 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
PTCHD4-202ENST00000398738 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
PTCHD4-202ENST00000398738 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
PTCHD4-202ENST00000398738 MT1HL1P0DM35 61 aa4.61□□□□□ -1.67
PTCHD4-202ENST00000398738 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
PTCHD4-202ENST00000398738 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
PTCHD4-202ENST00000398738 MUC2Q02817 5179 aa4.51□□□□□ -1.69
PTCHD4-202ENST00000398738 HERC1Q15751 4861 aa4.47□□□□□ -1.69
PTCHD4-202ENST00000398738 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
PTCHD4-202ENST00000398738 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
PTCHD4-202ENST00000398738 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
PTCHD4-202ENST00000398738 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
PTCHD4-202ENST00000398738 MUC17Q685J3 4493 aa4.37□□□□□ -1.71
PTCHD4-202ENST00000398738 TNP1P09430 55 aa4.34□□□□□ -1.71
PTCHD4-202ENST00000398738 FAT4Q6V0I7 4981 aa4.27□□□□□ -1.73
PTCHD4-202ENST00000398738 KRTAP19-2Q3LHN2 52 aa4.21□□□□□ -1.73
PTCHD4-202ENST00000398738 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
PTCHD4-202ENST00000398738 MT3P25713 68 aa4.17□□□□□ -1.74
PTCHD4-202ENST00000398738 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
PTCHD4-202ENST00000398738 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
PTCHD4-202ENST00000398738 FLGP20930 4061 aaPredicted RBP4.14□□□□□ -1.75
PTCHD4-202ENST00000398738 M0R2T5 61 aa4.14□□□□□ -1.75
PTCHD4-202ENST00000398738 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
PTCHD4-202ENST00000398738 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
PTCHD4-202ENST00000398738 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
PTCHD4-202ENST00000398738 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
PTCHD4-202ENST00000398738 KRTAP10-10P60014 251 aa4□□□□□ -1.77
PTCHD4-202ENST00000398738 SPRR2GQ9BYE4 73 aa3.96□□□□□ -1.78
PTCHD4-202ENST00000398738 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms