RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 RYR1P21817 5038 aa12.62□□□□□ -0.39
PABPN1-202ENST00000397276 MYCBP2O75592 4640 aa12.6□□□□□ -0.39
PABPN1-202ENST00000397276 KIAA1109Q2LD37 5005 aa12.58□□□□□ -0.4
PABPN1-202ENST00000397276 A0A1B0GU33 70 aa12.43□□□□□ -0.42
PABPN1-202ENST00000397276 COX6B2Q6YFQ2 88 aa12.41□□□□□ -0.42
PABPN1-202ENST00000397276 XP32Q5T750 250 aa12.39□□□□□ -0.43
PABPN1-202ENST00000397276 EPPK1P58107 5090 aaKnown RBP12.39□□□□□ -0.43
PABPN1-202ENST00000397276 RPL37P61927 97 aaKnown RBP12.37□□□□□ -0.43
PABPN1-202ENST00000397276 CRIPTQ9P021 101 aa12.35□□□□□ -0.43
PABPN1-202ENST00000397276 MT1HL1P0DM35 61 aa12.35□□□□□ -0.43
PABPN1-202ENST00000397276 H1FX-AS1Q4G0G2 97 aa12.35□□□□□ -0.43
PABPN1-202ENST00000397276 H3BS24 57 aa12.33□□□□□ -0.44
PABPN1-202ENST00000397276 KRTAP25-1Q3LHN0 102 aa12.31□□□□□ -0.44
PABPN1-202ENST00000397276 LPAP08519 4548 aa12.23□□□□□ -0.45
PABPN1-202ENST00000397276 LRP2P98164 4655 aa12.13□□□□□ -0.47
PABPN1-202ENST00000397276 ABCA13Q86UQ4 5058 aa12.1□□□□□ -0.47
PABPN1-202ENST00000397276 KRTAP3-3Q9BYR6 98 aa12.1□□□□□ -0.47
PABPN1-202ENST00000397276 ROMO1P60602 79 aa12.09□□□□□ -0.47
PABPN1-202ENST00000397276 KRTAP4-5Q9BYR2 181 aa12.09□□□□□ -0.47
PABPN1-202ENST00000397276 S4R3F8 94 aa12.03□□□□□ -0.48
PABPN1-202ENST00000397276 K7ERS5 55 aa12.01□□□□□ -0.49
PABPN1-202ENST00000397276 KRTAP13-4Q3LI77 160 aa11.98□□□□□ -0.49
PABPN1-202ENST00000397276 A0A0D9SG42 100 aa11.96□□□□□ -0.49
PABPN1-202ENST00000397276 KRTAP10-6P60371 365 aaPredicted RBP11.95□□□□□ -0.5
PABPN1-202ENST00000397276 TPRXLQ17RH7 258 aa11.95□□□□□ -0.5
PABPN1-202ENST00000397276 P0C880 135 aa11.85□□□□□ -0.51
PABPN1-202ENST00000397276 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
PABPN1-202ENST00000397276 C10orf95Q9H7T3 257 aa11.77□□□□□ -0.53
PABPN1-202ENST00000397276 J3QL48 77 aa11.67□□□□□ -0.54
PABPN1-202ENST00000397276 HERC2O95714 4834 aa11.65□□□□□ -0.54
PABPN1-202ENST00000397276 SPINT4Q6UDR6 99 aa11.62□□□□□ -0.55
PABPN1-202ENST00000397276 KRTAP12-2P59991 146 aa11.59□□□□□ -0.55
PABPN1-202ENST00000397276 SEC61BP60468 96 aaKnown RBP11.53□□□□□ -0.56
PABPN1-202ENST00000397276 MUC17Q685J3 4493 aa11.51□□□□□ -0.57
PABPN1-202ENST00000397276 KRTAP4-1Q9BYQ7 146 aa11.48□□□□□ -0.57
PABPN1-202ENST00000397276 KRTAP12-1P59990 96 aa11.41□□□□□ -0.58
PABPN1-202ENST00000397276 MUC2Q02817 5179 aa11.39□□□□□ -0.59
PABPN1-202ENST00000397276 KRTAP15-1Q3LI76 137 aa11.35□□□□□ -0.59
PABPN1-202ENST00000397276 NDUFAF8A1L188 74 aa11.32□□□□□ -0.6
PABPN1-202ENST00000397276 BIRC6Q9NR09 4857 aa11.31□□□□□ -0.6
PABPN1-202ENST00000397276 M0QZ58 72 aa11.28□□□□□ -0.6
PABPN1-202ENST00000397276 R4GN34 69 aa11.2□□□□□ -0.62
PABPN1-202ENST00000397276 HERC1Q15751 4861 aa11.19□□□□□ -0.62
PABPN1-202ENST00000397276 LORP23490 312 aaPredicted RBP11.17□□□□□ -0.62
PABPN1-202ENST00000397276 KRTAP19-2Q3LHN2 52 aa11.14□□□□□ -0.63
PABPN1-202ENST00000397276 PCLOQ9Y6V0 5065 aa11.14□□□□□ -0.63
PABPN1-202ENST00000397276 HMCN2Q8NDA2 5059 aa10.96□□□□□ -0.66
PABPN1-202ENST00000397276 FLGP20930 4061 aaPredicted RBP10.88□□□□□ -0.67
PABPN1-202ENST00000397276 FAT4Q6V0I7 4981 aa10.82□□□□□ -0.68
PABPN1-202ENST00000397276 RNF213Q63HN8 5207 aa10.67□□□□□ -0.7
PABPN1-202ENST00000397276 PLAC4Q8WY50 150 aa10.67□□□□□ -0.7
PABPN1-202ENST00000397276 UBR4Q5T4S7 5183 aa10.62□□□□□ -0.71
PABPN1-202ENST00000397276 CAMK2N1Q7Z7J9 78 aa10.61□□□□□ -0.71
PABPN1-202ENST00000397276 LCE2CQ5TA81 110 aa10.6□□□□□ -0.71
PABPN1-202ENST00000397276 M0R2T5 61 aa10.49□□□□□ -0.73
PABPN1-202ENST00000397276 MT1HP80294 61 aa10.36□□□□□ -0.75
PABPN1-202ENST00000397276 PP632Q6XCG6 107 aa10.22□□□□□ -0.77
PABPN1-202ENST00000397276 KRTAP19-1Q8IUB9 90 aa10.22□□□□□ -0.77
PABPN1-202ENST00000397276 LUZP6Q538Z0 58 aa10.2□□□□□ -0.78
PABPN1-202ENST00000397276 SPRR2GQ9BYE4 73 aa10.2□□□□□ -0.78
PABPN1-202ENST00000397276 KRTAP10-10P60014 251 aa10.17□□□□□ -0.78
PABPN1-202ENST00000397276 MT1FP04733 61 aa10.14□□□□□ -0.79
PABPN1-202ENST00000397276 MT2AP02795 61 aa10.13□□□□□ -0.79
PABPN1-202ENST00000397276 TNP1P09430 55 aa10.11□□□□□ -0.79
PABPN1-202ENST00000397276 KRTAP9-8Q9BYQ0 159 aa10.08□□□□□ -0.8
PABPN1-202ENST00000397276 A0A0A0MQY5 61 aa9.91□□□□□ -0.82
PABPN1-202ENST00000397276 SPRR5A0A1B0GTR4 108 aa9.78□□□□□ -0.84
PABPN1-202ENST00000397276 KRTAP19-8Q3LI54 63 aa9.75□□□□□ -0.85
PABPN1-202ENST00000397276 KRTAP23-1A1A580 65 aa9.75□□□□□ -0.85
PABPN1-202ENST00000397276 MT1BP07438 61 aa9.72□□□□□ -0.85
PABPN1-202ENST00000397276 LCE3AQ5TA76 89 aa9.67□□□□□ -0.86
PABPN1-202ENST00000397276 KRTAP9-3Q9BYQ3 159 aa9.64□□□□□ -0.87
PABPN1-202ENST00000397276 KRTAP10-5P60370 271 aa9.61□□□□□ -0.87
PABPN1-202ENST00000397276 MT1XP80297 61 aa9.6□□□□□ -0.87
PABPN1-202ENST00000397276 USH2AO75445 5202 aa9.45□□□□□ -0.9
PABPN1-202ENST00000397276 KRTAP10-7P60409 375 aaPredicted RBP9.37□□□□□ -0.91
PABPN1-202ENST00000397276 LCE2BO14633 110 aa9.35□□□□□ -0.91
PABPN1-202ENST00000397276 KRTAP10-12P60413 245 aa9.34□□□□□ -0.91
PABPN1-202ENST00000397276 KRTAP8-1Q8IUC2 63 aa9.31□□□□□ -0.92
PABPN1-202ENST00000397276 LCE2AQ5TA79 106 aaPredicted RBP9.28□□□□□ -0.92
PABPN1-202ENST00000397276 PRO2289Q9P1D8 64 aa9.25□□□□□ -0.93
PABPN1-202ENST00000397276 KRTAP12-3P60328 96 aa9.18□□□□□ -0.94
PABPN1-202ENST00000397276 KMT2DO14686 5537 aa9.16□□□□□ -0.94
PABPN1-202ENST00000397276 KRTAP19-5Q3LI72 72 aa8.92□□□□□ -0.98
PABPN1-202ENST00000397276 KRTAP4-8A0A0G2JLE6 195 aa8.91□□□□□ -0.98
PABPN1-202ENST00000397276 KRTAP4-8Q9BYQ9 185 aa8.91□□□□□ -0.98
PABPN1-202ENST00000397276 INE1O15225 51 aa8.8□□□□□ -1
PABPN1-202ENST00000397276 FSIP2Q5CZC0 6907 aa8.77□□□□□ -1.01
PABPN1-202ENST00000397276 SSPOA2VEC9 5147 aa8.67□□□□□ -1.02
PABPN1-202ENST00000397276 LCE3CQ5T5A8 94 aa8.61□□□□□ -1.03
PABPN1-202ENST00000397276 KRTAP19-7Q3SYF9 63 aa8.56□□□□□ -1.04
PABPN1-202ENST00000397276 KRTAP4-7Q9BYR0 210 aa8.44□□□□□ -1.06
PABPN1-202ENST00000397276 KRTAP19-6Q3LI70 58 aa8.38□□□□□ -1.07
PABPN1-202ENST00000397276 KRTAP9-6A8MVA2 160 aa8.37□□□□□ -1.07
PABPN1-202ENST00000397276 MT1EP04732 61 aa8.31□□□□□ -1.08
PABPN1-202ENST00000397276 MT1LQ93083 61 aa8.27□□□□□ -1.08
PABPN1-202ENST00000397276 FCGBPQ9Y6R7 5405 aaPredicted RBP8.19□□□□□ -1.1
PABPN1-202ENST00000397276 MUC12Q9UKN1 5478 aa8.12□□□□□ -1.11
PABPN1-202ENST00000397276 KRTAP2-3P0C7H8 128 aa8.02□□□□□ -1.13
PABPN1-202ENST00000397276 KRTAP2-4Q9BYR9 128 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms