RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 NEBP20929 6669 aa7.25□□□□□ -1.25
DDR1-229ENST00000396342 ATOX1O00244 68 aa7.22□□□□□ -1.25
DDR1-229ENST00000396342 ACYP1P07311 99 aa7.2□□□□□ -1.26
DDR1-229ENST00000396342 UQCRQO14949 82 aa7.18□□□□□ -1.26
DDR1-229ENST00000396342 HIST1H4AP62805 103 aaKnown RBP7.18□□□□□ -1.26
DDR1-229ENST00000396342 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
DDR1-229ENST00000396342 ATP5EP2Q5VTU8 51 aa7.17□□□□□ -1.26
DDR1-229ENST00000396342 H0Y9P7 68 aa7.15□□□□□ -1.26
DDR1-229ENST00000396342 KRTAP20-1Q3LI63 56 aa7.15□□□□□ -1.26
DDR1-229ENST00000396342 A0A1B0GV90 55 aa7.14□□□□□ -1.27
DDR1-229ENST00000396342 A8MUN3 132 aa7.14□□□□□ -1.27
DDR1-229ENST00000396342 PRO2289Q9P1D8 64 aa7.14□□□□□ -1.27
DDR1-229ENST00000396342 H0YAA0 97 aa7.13□□□□□ -1.27
DDR1-229ENST00000396342 A0A087WVE0 104 aa7.09□□□□□ -1.27
DDR1-229ENST00000396342 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
DDR1-229ENST00000396342 PLAC4Q8WY50 150 aa7.08□□□□□ -1.28
DDR1-229ENST00000396342 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
DDR1-229ENST00000396342 MUC12Q9UKN1 5478 aa7.07□□□□□ -1.28
DDR1-229ENST00000396342 FAM240AA0A1B0GVK7 77 aa7.05□□□□□ -1.28
DDR1-229ENST00000396342 MP68P56378 58 aa7.05□□□□□ -1.28
DDR1-229ENST00000396342 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
DDR1-229ENST00000396342 LINC00208Q96KT6 92 aa7.02□□□□□ -1.29
DDR1-229ENST00000396342 R4GN34 69 aa7□□□□□ -1.29
DDR1-229ENST00000396342 LINC00643Q86TS7 51 aa6.96□□□□□ -1.3
DDR1-229ENST00000396342 KMT2DO14686 5537 aa6.94□□□□□ -1.3
DDR1-229ENST00000396342 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
DDR1-229ENST00000396342 KRTAP2-3P0C7H8 128 aa6.92□□□□□ -1.3
DDR1-229ENST00000396342 KRTAP2-4Q9BYR9 128 aa6.92□□□□□ -1.3
DDR1-229ENST00000396342 MDN1Q9NU22 5596 aa6.91□□□□□ -1.3
DDR1-229ENST00000396342 M0QZ58 72 aa6.89□□□□□ -1.31
DDR1-229ENST00000396342 J3QR89 54 aa6.88□□□□□ -1.31
DDR1-229ENST00000396342 SPRR2EP22531 72 aa6.88□□□□□ -1.31
DDR1-229ENST00000396342 SPRR2BP35325 72 aa6.88□□□□□ -1.31
DDR1-229ENST00000396342 SPRR2AP35326 72 aa6.88□□□□□ -1.31
DDR1-229ENST00000396342 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
DDR1-229ENST00000396342 H3BPC8 53 aa6.86□□□□□ -1.31
DDR1-229ENST00000396342 SCGB1A1P11684 91 aa6.85□□□□□ -1.31
DDR1-229ENST00000396342 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
DDR1-229ENST00000396342 MT1XP80297 61 aa6.82□□□□□ -1.32
DDR1-229ENST00000396342 OCR1Q9BZK8 76 aa6.82□□□□□ -1.32
DDR1-229ENST00000396342 P0C880 135 aa6.78□□□□□ -1.32
DDR1-229ENST00000396342 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
DDR1-229ENST00000396342 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
DDR1-229ENST00000396342 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
DDR1-229ENST00000396342 MT-ATP8P03928 68 aa6.74□□□□□ -1.33
DDR1-229ENST00000396342 TRAV7A0A075B6U4 112 aa6.7□□□□□ -1.34
DDR1-229ENST00000396342 K7ERU9 68 aa6.7□□□□□ -1.34
DDR1-229ENST00000396342 ACYP2P14621 99 aa6.69□□□□□ -1.34
DDR1-229ENST00000396342 KRTAP2-2Q9BYT5 123 aa6.68□□□□□ -1.34
DDR1-229ENST00000396342 KRTAP2-1Q9BYU5 128 aa6.68□□□□□ -1.34
DDR1-229ENST00000396342 SPRR2DP22532 72 aa6.67□□□□□ -1.34
DDR1-229ENST00000396342 LCE1AQ5T7P2 110 aa6.66□□□□□ -1.34
DDR1-229ENST00000396342 CHKB-CPT1BH3BT56 60 aa6.65□□□□□ -1.34
DDR1-229ENST00000396342 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
DDR1-229ENST00000396342 SMIM20Q8N5G0 67 aa6.57□□□□□ -1.36
DDR1-229ENST00000396342 KRTAP4-8A0A0G2JLE6 195 aa6.56□□□□□ -1.36
DDR1-229ENST00000396342 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
DDR1-229ENST00000396342 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
DDR1-229ENST00000396342 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
DDR1-229ENST00000396342 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
DDR1-229ENST00000396342 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
DDR1-229ENST00000396342 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
DDR1-229ENST00000396342 SEC61GP60059 68 aa6.34□□□□□ -1.39
DDR1-229ENST00000396342 SERP2Q8N6R1 65 aa6.32□□□□□ -1.4
DDR1-229ENST00000396342 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
DDR1-229ENST00000396342 SERP1Q9Y6X1 66 aa6.29□□□□□ -1.4
DDR1-229ENST00000396342 A0A0D9SG42 100 aa6.19□□□□□ -1.42
DDR1-229ENST00000396342 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
DDR1-229ENST00000396342 COX7CP15954 63 aa6.18□□□□□ -1.42
DDR1-229ENST00000396342 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.42
DDR1-229ENST00000396342 COA5Q86WW8 74 aa6.15□□□□□ -1.42
DDR1-229ENST00000396342 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
DDR1-229ENST00000396342 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
DDR1-229ENST00000396342 A0A1B0GU33 70 aa6.09□□□□□ -1.43
DDR1-229ENST00000396342 DSTQ03001 7570 aaKnown RBP6.08□□□□□ -1.44
DDR1-229ENST00000396342 MT1EP04732 61 aa6.08□□□□□ -1.44
DDR1-229ENST00000396342 ANAPC13Q9BS18 74 aa6.08□□□□□ -1.44
DDR1-229ENST00000396342 GPR98Q8WXG9 6306 aa6.07□□□□□ -1.44
DDR1-229ENST00000396342 KRTAP19-7Q3SYF9 63 aa6.07□□□□□ -1.44
DDR1-229ENST00000396342 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
DDR1-229ENST00000396342 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
DDR1-229ENST00000396342 CYSTM1Q9H1C7 97 aa6.05□□□□□ -1.44
DDR1-229ENST00000396342 H7BZZ5 65 aa6.03□□□□□ -1.44
DDR1-229ENST00000396342 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
DDR1-229ENST00000396342 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
DDR1-229ENST00000396342 MT1GP13640 62 aa5.99□□□□□ -1.45
DDR1-229ENST00000396342 CCDC179H3BU77 68 aa5.95□□□□□ -1.46
DDR1-229ENST00000396342 KRTAP19-5Q3LI72 72 aa5.95□□□□□ -1.46
DDR1-229ENST00000396342 A0A1B0GU69 56 aa5.94□□□□□ -1.46
DDR1-229ENST00000396342 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
DDR1-229ENST00000396342 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
DDR1-229ENST00000396342 TNP1P09430 55 aa5.87□□□□□ -1.47
DDR1-229ENST00000396342 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
DDR1-229ENST00000396342 MT4P47944 62 aa5.82□□□□□ -1.48
DDR1-229ENST00000396342 MT1MQ8N339 61 aa5.81□□□□□ -1.48
DDR1-229ENST00000396342 PRR15LQ9BU68 103 aa5.8□□□□□ -1.48
DDR1-229ENST00000396342 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
DDR1-229ENST00000396342 MT1LQ93083 61 aa5.78□□□□□ -1.48
DDR1-229ENST00000396342 C10orf95Q9H7T3 257 aa5.76□□□□□ -1.49
DDR1-229ENST00000396342 A8MU10 97 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms