RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 A0A1W2PNM2 257 aa3.48□□□□□ -1.85
LMO3-205ENST00000396205 IGKV4-1P06312 121 aa3.48□□□□□ -1.85
LMO3-205ENST00000396205 PCOTHQ58A44 107 aa3.48□□□□□ -1.85
LMO3-205ENST00000396205 LINC01558Q9Y6Z2 57 aa3.48□□□□□ -1.85
LMO3-205ENST00000396205 LINC00472Q9H8W2 130 aa3.48□□□□□ -1.85
LMO3-205ENST00000396205 MT1HP80294 61 aa3.47□□□□□ -1.85
LMO3-205ENST00000396205 FLGP20930 4061 aaPredicted RBP3.47□□□□□ -1.85
LMO3-205ENST00000396205 KRTAP16-1A8MUX0 517 aa3.47□□□□□ -1.85
LMO3-205ENST00000396205 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.86
LMO3-205ENST00000396205 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
LMO3-205ENST00000396205 A0A0G2JQZ4 141 aa3.45□□□□□ -1.86
LMO3-205ENST00000396205 A0A087WSZ3 146 aa3.44□□□□□ -1.86
LMO3-205ENST00000396205 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
LMO3-205ENST00000396205 PRAC1Q96KF2 57 aa3.4□□□□□ -1.86
LMO3-205ENST00000396205 A0A1B0GVX0 72 aa3.4□□□□□ -1.87
LMO3-205ENST00000396205 COA5Q86WW8 74 aa3.37□□□□□ -1.87
LMO3-205ENST00000396205 A8MWP4 228 aa3.37□□□□□ -1.87
LMO3-205ENST00000396205 ROMO1P60602 79 aa3.37□□□□□ -1.87
LMO3-205ENST00000396205 H0Y9P7 68 aa3.37□□□□□ -1.87
LMO3-205ENST00000396205 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
LMO3-205ENST00000396205 HRES1P13985 223 aa3.36□□□□□ -1.87
LMO3-205ENST00000396205 DSCR10P59022 87 aa3.35□□□□□ -1.87
LMO3-205ENST00000396205 SPINK7P58062 85 aa3.35□□□□□ -1.87
LMO3-205ENST00000396205 Q8N9L7 120 aa3.34□□□□□ -1.87
LMO3-205ENST00000396205 SPATA8Q6RVD6 105 aa3.33□□□□□ -1.88
LMO3-205ENST00000396205 CSAG1Q6PB30 78 aa3.32□□□□□ -1.88
LMO3-205ENST00000396205 WFDC13Q8IUB5 93 aa3.32□□□□□ -1.88
LMO3-205ENST00000396205 C8orf17Q9NRJ1 99 aa3.32□□□□□ -1.88
LMO3-205ENST00000396205 ADM2Q7Z4H4 148 aa3.32□□□□□ -1.88
LMO3-205ENST00000396205 COX6B2Q6YFQ2 88 aa3.31□□□□□ -1.88
LMO3-205ENST00000396205 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
LMO3-205ENST00000396205 MMP24-AS1A0A0U1RRL7 71 aa3.3□□□□□ -1.88
LMO3-205ENST00000396205 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
LMO3-205ENST00000396205 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
LMO3-205ENST00000396205 MRPL34Q9BQ48 92 aaKnown RBP3.28□□□□□ -1.88
LMO3-205ENST00000396205 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
LMO3-205ENST00000396205 UQCR11O14957 56 aa3.27□□□□□ -1.89
LMO3-205ENST00000396205 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
LMO3-205ENST00000396205 K7EQZ3 153 aa3.25□□□□□ -1.89
LMO3-205ENST00000396205 M0R2T5 61 aa3.25□□□□□ -1.89
LMO3-205ENST00000396205 DEFB116Q30KQ4 102 aa3.25□□□□□ -1.89
LMO3-205ENST00000396205 TP53AIP1Q9HCN2 124 aa3.24□□□□□ -1.89
LMO3-205ENST00000396205 MT2AP02795 61 aa3.23□□□□□ -1.89
LMO3-205ENST00000396205 DMAC1Q96GE9 116 aa3.22□□□□□ -1.89
LMO3-205ENST00000396205 K7ERS5 55 aa3.22□□□□□ -1.89
LMO3-205ENST00000396205 KRTAP9-3Q9BYQ3 159 aa3.22□□□□□ -1.89
LMO3-205ENST00000396205 A0A1B0GU69 56 aa3.2□□□□□ -1.9
LMO3-205ENST00000396205 P0C880 135 aa3.2□□□□□ -1.9
LMO3-205ENST00000396205 H1FX-AS1Q4G0G2 97 aa3.19□□□□□ -1.9
LMO3-205ENST00000396205 MT1FP04733 61 aa3.19□□□□□ -1.9
LMO3-205ENST00000396205 ACYP2P14621 99 aa3.19□□□□□ -1.9
LMO3-205ENST00000396205 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
LMO3-205ENST00000396205 Q5W150 140 aa3.16□□□□□ -1.9
LMO3-205ENST00000396205 IGKV2-30P06310 120 aa3.16□□□□□ -1.9
LMO3-205ENST00000396205 LUZP6Q538Z0 58 aa3.15□□□□□ -1.9
LMO3-205ENST00000396205 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
LMO3-205ENST00000396205 KRTAP10-10P60014 251 aa3.1□□□□□ -1.91
LMO3-205ENST00000396205 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
LMO3-205ENST00000396205 USH2AO75445 5202 aa3.1□□□□□ -1.91
LMO3-205ENST00000396205 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
LMO3-205ENST00000396205 KRTAP3-1Q9BYR8 98 aa3.08□□□□□ -1.92
LMO3-205ENST00000396205 H0YAA0 97 aa3.08□□□□□ -1.92
LMO3-205ENST00000396205 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
LMO3-205ENST00000396205 IGKV2D-30A0A075B6S6 120 aa3.07□□□□□ -1.92
LMO3-205ENST00000396205 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
LMO3-205ENST00000396205 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
LMO3-205ENST00000396205 KRTAP15-1Q3LI76 137 aa3.06□□□□□ -1.92
LMO3-205ENST00000396205 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
LMO3-205ENST00000396205 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
LMO3-205ENST00000396205 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
LMO3-205ENST00000396205 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
LMO3-205ENST00000396205 S4R3F8 94 aa3.05□□□□□ -1.92
LMO3-205ENST00000396205 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
LMO3-205ENST00000396205 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
LMO3-205ENST00000396205 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
LMO3-205ENST00000396205 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
LMO3-205ENST00000396205 KRTAP4-8A0A0G2JLE6 195 aa2.97□□□□□ -1.93
LMO3-205ENST00000396205 MT1BP07438 61 aa2.97□□□□□ -1.93
LMO3-205ENST00000396205 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
LMO3-205ENST00000396205 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
LMO3-205ENST00000396205 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
LMO3-205ENST00000396205 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
LMO3-205ENST00000396205 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
LMO3-205ENST00000396205 A0A1B0GU33 70 aa2.9□□□□□ -1.95
LMO3-205ENST00000396205 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
LMO3-205ENST00000396205 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
LMO3-205ENST00000396205 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
LMO3-205ENST00000396205 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
LMO3-205ENST00000396205 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
LMO3-205ENST00000396205 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
LMO3-205ENST00000396205 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
LMO3-205ENST00000396205 MT1XP80297 61 aa2.79□□□□□ -1.96
LMO3-205ENST00000396205 PLAC4Q8WY50 150 aa2.78□□□□□ -1.96
LMO3-205ENST00000396205 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
LMO3-205ENST00000396205 M0QZ58 72 aa2.76□□□□□ -1.97
LMO3-205ENST00000396205 R4GN34 69 aa2.76□□□□□ -1.97
LMO3-205ENST00000396205 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
LMO3-205ENST00000396205 KRTAP19-4Q3LI73 84 aa2.74□□□□□ -1.97
LMO3-205ENST00000396205 NEBP20929 6669 aa2.74□□□□□ -1.97
LMO3-205ENST00000396205 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms