RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 C8orf17Q9NRJ1 99 aa5.44□□□□□ -1.54
THUMPD1-202ENST00000396083 LINC00313P59037 77 aa5.4□□□□□ -1.55
THUMPD1-202ENST00000396083 MUC17Q685J3 4493 aa5.39□□□□□ -1.55
THUMPD1-202ENST00000396083 RPL37P61927 97 aaKnown RBP5.39□□□□□ -1.55
THUMPD1-202ENST00000396083 A0A1B0GVX0 72 aa5.39□□□□□ -1.55
THUMPD1-202ENST00000396083 MRPL34Q9BQ48 92 aaKnown RBP5.38□□□□□ -1.55
THUMPD1-202ENST00000396083 C8orf87E5RJ46 101 aa5.35□□□□□ -1.55
THUMPD1-202ENST00000396083 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
THUMPD1-202ENST00000396083 KRTAP16-1A8MUX0 517 aa5.32□□□□□ -1.56
THUMPD1-202ENST00000396083 ACYP2P14621 99 aa5.32□□□□□ -1.56
THUMPD1-202ENST00000396083 C20orf166-AS1Q96NR2 134 aa5.31□□□□□ -1.56
THUMPD1-202ENST00000396083 Q5W150 140 aa5.31□□□□□ -1.56
THUMPD1-202ENST00000396083 A8MUU9 505 aa5.3□□□□□ -1.56
THUMPD1-202ENST00000396083 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
THUMPD1-202ENST00000396083 A0A1B0GU69 56 aa5.27□□□□□ -1.57
THUMPD1-202ENST00000396083 DMAC1Q96GE9 116 aa5.27□□□□□ -1.57
THUMPD1-202ENST00000396083 LINC01554Q52M75 96 aa5.26□□□□□ -1.57
THUMPD1-202ENST00000396083 SPATA8Q6RVD6 105 aa5.26□□□□□ -1.57
THUMPD1-202ENST00000396083 COX6B2Q6YFQ2 88 aa5.26□□□□□ -1.57
THUMPD1-202ENST00000396083 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
THUMPD1-202ENST00000396083 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
THUMPD1-202ENST00000396083 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
THUMPD1-202ENST00000396083 UQCR11O14957 56 aa5.21□□□□□ -1.58
THUMPD1-202ENST00000396083 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.58
THUMPD1-202ENST00000396083 M0R2T5 61 aa5.17□□□□□ -1.58
THUMPD1-202ENST00000396083 IGKV2-30P06310 120 aa5.16□□□□□ -1.58
THUMPD1-202ENST00000396083 MT1HP80294 61 aa5.15□□□□□ -1.58
THUMPD1-202ENST00000396083 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
THUMPD1-202ENST00000396083 H3BS24 57 aa5.14□□□□□ -1.59
THUMPD1-202ENST00000396083 IGKV2D-30A0A075B6S6 120 aa5.13□□□□□ -1.59
THUMPD1-202ENST00000396083 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
THUMPD1-202ENST00000396083 FLGP20930 4061 aaPredicted RBP5.12□□□□□ -1.59
THUMPD1-202ENST00000396083 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
THUMPD1-202ENST00000396083 LORP23490 312 aaPredicted RBP4.99□□□□□ -1.61
THUMPD1-202ENST00000396083 H0YAA0 97 aa4.97□□□□□ -1.61
THUMPD1-202ENST00000396083 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
THUMPD1-202ENST00000396083 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
THUMPD1-202ENST00000396083 ROMO1P60602 79 aa4.93□□□□□ -1.62
THUMPD1-202ENST00000396083 A0A1B0GU33 70 aa4.92□□□□□ -1.62
THUMPD1-202ENST00000396083 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
THUMPD1-202ENST00000396083 USH2AO75445 5202 aa4.89□□□□□ -1.63
THUMPD1-202ENST00000396083 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
THUMPD1-202ENST00000396083 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
THUMPD1-202ENST00000396083 MT2AP02795 61 aa4.85□□□□□ -1.63
THUMPD1-202ENST00000396083 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
THUMPD1-202ENST00000396083 MT1FP04733 61 aa4.84□□□□□ -1.63
THUMPD1-202ENST00000396083 CRIPTQ9P021 101 aa4.84□□□□□ -1.63
THUMPD1-202ENST00000396083 K7ERS5 55 aa4.83□□□□□ -1.64
THUMPD1-202ENST00000396083 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
THUMPD1-202ENST00000396083 S4R3F8 94 aa4.81□□□□□ -1.64
THUMPD1-202ENST00000396083 LCE2DQ5TA82 110 aaPredicted RBP4.8□□□□□ -1.64
THUMPD1-202ENST00000396083 P0C880 135 aa4.79□□□□□ -1.64
THUMPD1-202ENST00000396083 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
THUMPD1-202ENST00000396083 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
THUMPD1-202ENST00000396083 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
THUMPD1-202ENST00000396083 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
THUMPD1-202ENST00000396083 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
THUMPD1-202ENST00000396083 LCE2BO14633 110 aa4.71□□□□□ -1.66
THUMPD1-202ENST00000396083 SPINT4Q6UDR6 99 aa4.69□□□□□ -1.66
THUMPD1-202ENST00000396083 A0A0D9SG42 100 aa4.65□□□□□ -1.66
THUMPD1-202ENST00000396083 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
THUMPD1-202ENST00000396083 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
THUMPD1-202ENST00000396083 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
THUMPD1-202ENST00000396083 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
THUMPD1-202ENST00000396083 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
THUMPD1-202ENST00000396083 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
THUMPD1-202ENST00000396083 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
THUMPD1-202ENST00000396083 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
THUMPD1-202ENST00000396083 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
THUMPD1-202ENST00000396083 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
THUMPD1-202ENST00000396083 MT1BP07438 61 aa4.46□□□□□ -1.7
THUMPD1-202ENST00000396083 R4GN34 69 aa4.45□□□□□ -1.7
THUMPD1-202ENST00000396083 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
THUMPD1-202ENST00000396083 M0QZ58 72 aa4.44□□□□□ -1.7
THUMPD1-202ENST00000396083 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
THUMPD1-202ENST00000396083 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
THUMPD1-202ENST00000396083 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
THUMPD1-202ENST00000396083 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
THUMPD1-202ENST00000396083 KMT2DO14686 5537 aa4.32□□□□□ -1.72
THUMPD1-202ENST00000396083 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
THUMPD1-202ENST00000396083 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
THUMPD1-202ENST00000396083 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
THUMPD1-202ENST00000396083 MT1XP80297 61 aa4.23□□□□□ -1.73
THUMPD1-202ENST00000396083 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
THUMPD1-202ENST00000396083 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
THUMPD1-202ENST00000396083 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
THUMPD1-202ENST00000396083 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
THUMPD1-202ENST00000396083 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
THUMPD1-202ENST00000396083 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
THUMPD1-202ENST00000396083 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.75
THUMPD1-202ENST00000396083 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
THUMPD1-202ENST00000396083 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
THUMPD1-202ENST00000396083 KRTAP6-3Q3LI67 103 aa4.08□□□□□ -1.76
THUMPD1-202ENST00000396083 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
THUMPD1-202ENST00000396083 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
THUMPD1-202ENST00000396083 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
THUMPD1-202ENST00000396083 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
THUMPD1-202ENST00000396083 KRTAP10-12P60413 245 aa3.96□□□□□ -1.77
THUMPD1-202ENST00000396083 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
THUMPD1-202ENST00000396083 NEBP20929 6669 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms