RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 OCR1Q9BZK8 76 aa7.94□□□□□ -1.14
UPK3A-202ENST00000396082 NDUFC1O43677 76 aa7.91□□□□□ -1.14
UPK3A-202ENST00000396082 KLKP1Q107X0 134 aa7.91□□□□□ -1.14
UPK3A-202ENST00000396082 A8MUN3 132 aa7.9□□□□□ -1.14
UPK3A-202ENST00000396082 SCGB1A1P11684 91 aa7.88□□□□□ -1.15
UPK3A-202ENST00000396082 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
UPK3A-202ENST00000396082 IMUPQ9GZP8 106 aa7.87□□□□□ -1.15
UPK3A-202ENST00000396082 Q5VV11 94 aa7.86□□□□□ -1.15
UPK3A-202ENST00000396082 MACF1Q9UPN3 7388 aaKnown RBP7.83□□□□□ -1.16
UPK3A-202ENST00000396082 H3BPC8 53 aa7.82□□□□□ -1.16
UPK3A-202ENST00000396082 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
UPK3A-202ENST00000396082 MT1BP07438 61 aa7.8□□□□□ -1.16
UPK3A-202ENST00000396082 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
UPK3A-202ENST00000396082 H0YAA0 97 aa7.76□□□□□ -1.17
UPK3A-202ENST00000396082 A6NN06 94 aa7.75□□□□□ -1.17
UPK3A-202ENST00000396082 K7ERU9 68 aa7.73□□□□□ -1.17
UPK3A-202ENST00000396082 ADM2Q7Z4H4 148 aa7.73□□□□□ -1.17
UPK3A-202ENST00000396082 MT-ATP8P03928 68 aa7.7□□□□□ -1.18
UPK3A-202ENST00000396082 SYNE2Q8WXH0 6885 aaKnown RBP7.69□□□□□ -1.18
UPK3A-202ENST00000396082 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
UPK3A-202ENST00000396082 SMIM20Q8N5G0 67 aa7.64□□□□□ -1.19
UPK3A-202ENST00000396082 TRAV7A0A075B6U4 112 aa7.62□□□□□ -1.19
UPK3A-202ENST00000396082 KRTAP10-5P60370 271 aa7.62□□□□□ -1.19
UPK3A-202ENST00000396082 KRTAP6-3Q3LI67 103 aa7.59□□□□□ -1.19
UPK3A-202ENST00000396082 C20orf197Q8N268 126 aa7.58□□□□□ -1.2
UPK3A-202ENST00000396082 R4GN34 69 aa7.55□□□□□ -1.2
UPK3A-202ENST00000396082 ACYP2P14621 99 aa7.54□□□□□ -1.2
UPK3A-202ENST00000396082 P0C880 135 aa7.53□□□□□ -1.2
UPK3A-202ENST00000396082 M0QZ58 72 aa7.49□□□□□ -1.21
UPK3A-202ENST00000396082 PLAC4Q8WY50 150 aa7.48□□□□□ -1.21
UPK3A-202ENST00000396082 SNURFQ9Y675 71 aa7.48□□□□□ -1.21
UPK3A-202ENST00000396082 SPTSSBQ8NFR3 76 aa7.47□□□□□ -1.21
UPK3A-202ENST00000396082 CHKB-CPT1BH3BT56 60 aa7.45□□□□□ -1.22
UPK3A-202ENST00000396082 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
UPK3A-202ENST00000396082 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
UPK3A-202ENST00000396082 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
UPK3A-202ENST00000396082 SERP2Q8N6R1 65 aa7.38□□□□□ -1.23
UPK3A-202ENST00000396082 MT1XP80297 61 aa7.34□□□□□ -1.23
UPK3A-202ENST00000396082 SPANXA2-OT1Q8N9U9 137 aa7.34□□□□□ -1.23
UPK3A-202ENST00000396082 KRTAP5-9P26371 169 aa7.26□□□□□ -1.25
UPK3A-202ENST00000396082 NEBP20929 6669 aa7.23□□□□□ -1.25
UPK3A-202ENST00000396082 MUC12Q9UKN1 5478 aa7.2□□□□□ -1.26
UPK3A-202ENST00000396082 COX7CP15954 63 aa7.17□□□□□ -1.26
UPK3A-202ENST00000396082 COA5Q86WW8 74 aa7.16□□□□□ -1.26
UPK3A-202ENST00000396082 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
UPK3A-202ENST00000396082 KRTAP8-1Q8IUC2 63 aa7.12□□□□□ -1.27
UPK3A-202ENST00000396082 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
UPK3A-202ENST00000396082 KMT2DO14686 5537 aa7.1□□□□□ -1.27
UPK3A-202ENST00000396082 SEC61GP60059 68 aa7.06□□□□□ -1.28
UPK3A-202ENST00000396082 KRTAP20-1Q3LI63 56 aa7.04□□□□□ -1.28
UPK3A-202ENST00000396082 KRTAP13-4Q3LI77 160 aa7.04□□□□□ -1.28
UPK3A-202ENST00000396082 SERP1Q9Y6X1 66 aa7.04□□□□□ -1.28
UPK3A-202ENST00000396082 H7BZZ5 65 aa7.03□□□□□ -1.28
UPK3A-202ENST00000396082 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
UPK3A-202ENST00000396082 CYSTM1Q9H1C7 97 aa7.02□□□□□ -1.29
UPK3A-202ENST00000396082 KRTAP4-8A0A0G2JLE6 195 aa7.01□□□□□ -1.29
UPK3A-202ENST00000396082 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
UPK3A-202ENST00000396082 SPRR2EP22531 72 aa7□□□□□ -1.29
UPK3A-202ENST00000396082 SPRR2BP35325 72 aa7□□□□□ -1.29
UPK3A-202ENST00000396082 SPRR2AP35326 72 aa7□□□□□ -1.29
UPK3A-202ENST00000396082 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
UPK3A-202ENST00000396082 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
UPK3A-202ENST00000396082 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
UPK3A-202ENST00000396082 MDN1Q9NU22 5596 aa6.96□□□□□ -1.3
UPK3A-202ENST00000396082 A0A0D9SG42 100 aa6.91□□□□□ -1.3
UPK3A-202ENST00000396082 A0A1B0GU33 70 aa6.88□□□□□ -1.31
UPK3A-202ENST00000396082 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
UPK3A-202ENST00000396082 LCE1AQ5T7P2 110 aa6.87□□□□□ -1.31
UPK3A-202ENST00000396082 KRTAP2-3P0C7H8 128 aa6.85□□□□□ -1.31
UPK3A-202ENST00000396082 KRTAP2-4Q9BYR9 128 aa6.85□□□□□ -1.31
UPK3A-202ENST00000396082 A0A1B0GU69 56 aa6.82□□□□□ -1.32
UPK3A-202ENST00000396082 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
UPK3A-202ENST00000396082 CCDC179H3BU77 68 aa6.8□□□□□ -1.32
UPK3A-202ENST00000396082 SPRR2DP22532 72 aa6.77□□□□□ -1.33
UPK3A-202ENST00000396082 ATP5EP56381 51 aaPredicted RBP6.73□□□□□ -1.33
UPK3A-202ENST00000396082 SMIM26A0A096LP01 95 aa6.71□□□□□ -1.34
UPK3A-202ENST00000396082 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
UPK3A-202ENST00000396082 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
UPK3A-202ENST00000396082 KRTAP2-2Q9BYT5 123 aa6.64□□□□□ -1.35
UPK3A-202ENST00000396082 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
UPK3A-202ENST00000396082 A8MU10 97 aa6.63□□□□□ -1.35
UPK3A-202ENST00000396082 TMEM258P61165 79 aa6.57□□□□□ -1.36
UPK3A-202ENST00000396082 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
UPK3A-202ENST00000396082 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
UPK3A-202ENST00000396082 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
UPK3A-202ENST00000396082 MT1EP04732 61 aa6.5□□□□□ -1.37
UPK3A-202ENST00000396082 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
UPK3A-202ENST00000396082 TNP1P09430 55 aa6.43□□□□□ -1.38
UPK3A-202ENST00000396082 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
UPK3A-202ENST00000396082 LCE5AQ5TCM9 118 aa6.43□□□□□ -1.38
UPK3A-202ENST00000396082 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
UPK3A-202ENST00000396082 UQCR11O14957 56 aa6.4□□□□□ -1.38
UPK3A-202ENST00000396082 LCE3AQ5TA76 89 aa6.33□□□□□ -1.4
UPK3A-202ENST00000396082 MT1GP13640 62 aa6.3□□□□□ -1.4
UPK3A-202ENST00000396082 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
UPK3A-202ENST00000396082 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
UPK3A-202ENST00000396082 DSTQ03001 7570 aaKnown RBP6.25□□□□□ -1.41
UPK3A-202ENST00000396082 MT1LQ93083 61 aa6.23□□□□□ -1.41
UPK3A-202ENST00000396082 V9GYY9 64 aa6.23□□□□□ -1.41
UPK3A-202ENST00000396082 MT1MQ8N339 61 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms