RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 UQCR11O14957 56 aa9.69□□□□□ -0.86
SREBF1-204ENST00000395756 FAT3Q8TDW7 4589 aa9.69□□□□□ -0.86
SREBF1-204ENST00000395756 KRTAP10-8P60410 259 aa9.66□□□□□ -0.86
SREBF1-204ENST00000395756 C20orf166-AS1Q96NR2 134 aa9.65□□□□□ -0.86
SREBF1-204ENST00000395756 A8MUU9 505 aa9.64□□□□□ -0.87
SREBF1-204ENST00000395756 CRIPTQ9P021 101 aa9.56□□□□□ -0.88
SREBF1-204ENST00000395756 P0C880 135 aa9.55□□□□□ -0.88
SREBF1-204ENST00000395756 KRTAP25-1Q3LHN0 102 aa9.54□□□□□ -0.88
SREBF1-204ENST00000395756 A0A0A0MQY5 61 aa9.54□□□□□ -0.88
SREBF1-204ENST00000395756 MT1HL1P0DM35 61 aa9.47□□□□□ -0.89
SREBF1-204ENST00000395756 KRTAP3-1Q9BYR8 98 aa9.46□□□□□ -0.89
SREBF1-204ENST00000395756 KRTAP4-5Q9BYR2 181 aa9.45□□□□□ -0.9
SREBF1-204ENST00000395756 XP32Q5T750 250 aa9.42□□□□□ -0.9
SREBF1-204ENST00000395756 ABCA13Q86UQ4 5058 aa9.41□□□□□ -0.9
SREBF1-204ENST00000395756 LPAP08519 4548 aa9.39□□□□□ -0.91
SREBF1-204ENST00000395756 LRP2P98164 4655 aa9.37□□□□□ -0.91
SREBF1-204ENST00000395756 RPL37P61927 97 aaKnown RBP9.36□□□□□ -0.91
SREBF1-204ENST00000395756 COX6B2Q6YFQ2 88 aa9.3□□□□□ -0.92
SREBF1-204ENST00000395756 NDUFAF8A1L188 74 aa9.29□□□□□ -0.92
SREBF1-204ENST00000395756 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
SREBF1-204ENST00000395756 HERC2O95714 4834 aa9.2□□□□□ -0.94
SREBF1-204ENST00000395756 H0YAA0 97 aa9.19□□□□□ -0.94
SREBF1-204ENST00000395756 J3QL48 77 aa9.13□□□□□ -0.95
SREBF1-204ENST00000395756 TPRXLQ17RH7 258 aa9.09□□□□□ -0.95
SREBF1-204ENST00000395756 A0A1B0GU33 70 aa9.06□□□□□ -0.96
SREBF1-204ENST00000395756 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
SREBF1-204ENST00000395756 S4R3F8 94 aa9.05□□□□□ -0.96
SREBF1-204ENST00000395756 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
SREBF1-204ENST00000395756 K7ERS5 55 aa8.95□□□□□ -0.98
SREBF1-204ENST00000395756 BIRC6Q9NR09 4857 aa8.95□□□□□ -0.98
SREBF1-204ENST00000395756 MUC2Q02817 5179 aa8.94□□□□□ -0.98
SREBF1-204ENST00000395756 C10orf95Q9H7T3 257 aa8.91□□□□□ -0.98
SREBF1-204ENST00000395756 KRTAP15-1Q3LI76 137 aa8.9□□□□□ -0.99
SREBF1-204ENST00000395756 HERC1Q15751 4861 aa8.88□□□□□ -0.99
SREBF1-204ENST00000395756 KRTAP10-6P60371 365 aaPredicted RBP8.87□□□□□ -0.99
SREBF1-204ENST00000395756 A0A0D9SG42 100 aa8.86□□□□□ -0.99
SREBF1-204ENST00000395756 PCLOQ9Y6V0 5065 aa8.83□□□□□ -1
SREBF1-204ENST00000395756 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
SREBF1-204ENST00000395756 SEC61BP60468 96 aaKnown RBP8.82□□□□□ -1
SREBF1-204ENST00000395756 LUZP6Q538Z0 58 aa8.81□□□□□ -1
SREBF1-204ENST00000395756 KRTAP13-4Q3LI77 160 aa8.8□□□□□ -1
SREBF1-204ENST00000395756 KRTAP4-1Q9BYQ7 146 aa8.8□□□□□ -1
SREBF1-204ENST00000395756 MUC17Q685J3 4493 aa8.74□□□□□ -1.01
SREBF1-204ENST00000395756 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
SREBF1-204ENST00000395756 FAT4Q6V0I7 4981 aa8.5□□□□□ -1.05
SREBF1-204ENST00000395756 KRTAP12-2P59991 146 aa8.5□□□□□ -1.05
SREBF1-204ENST00000395756 M0QZ58 72 aa8.48□□□□□ -1.05
SREBF1-204ENST00000395756 RNF213Q63HN8 5207 aa8.48□□□□□ -1.05
SREBF1-204ENST00000395756 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.06
SREBF1-204ENST00000395756 R4GN34 69 aa8.45□□□□□ -1.06
SREBF1-204ENST00000395756 KRTAP19-2Q3LHN2 52 aa8.44□□□□□ -1.06
SREBF1-204ENST00000395756 UBR4Q5T4S7 5183 aa8.41□□□□□ -1.06
SREBF1-204ENST00000395756 KRTAP12-1P59990 96 aa8.39□□□□□ -1.07
SREBF1-204ENST00000395756 FLGP20930 4061 aaPredicted RBP8.31□□□□□ -1.08
SREBF1-204ENST00000395756 M0R2T5 61 aa8.16□□□□□ -1.1
SREBF1-204ENST00000395756 PLAC4Q8WY50 150 aa8.15□□□□□ -1.11
SREBF1-204ENST00000395756 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
SREBF1-204ENST00000395756 CAMK2N1Q7Z7J9 78 aa8.03□□□□□ -1.12
SREBF1-204ENST00000395756 MT1HP80294 61 aa7.97□□□□□ -1.13
SREBF1-204ENST00000395756 KRTAP10-10P60014 251 aa7.85□□□□□ -1.15
SREBF1-204ENST00000395756 MT1FP04733 61 aa7.78□□□□□ -1.16
SREBF1-204ENST00000395756 MT2AP02795 61 aa7.76□□□□□ -1.17
SREBF1-204ENST00000395756 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
SREBF1-204ENST00000395756 KRTAP9-8Q9BYQ0 159 aa7.71□□□□□ -1.17
SREBF1-204ENST00000395756 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
SREBF1-204ENST00000395756 TNP1P09430 55 aa7.57□□□□□ -1.2
SREBF1-204ENST00000395756 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
SREBF1-204ENST00000395756 USH2AO75445 5202 aa7.46□□□□□ -1.21
SREBF1-204ENST00000395756 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
SREBF1-204ENST00000395756 MT1BP07438 61 aa7.39□□□□□ -1.23
SREBF1-204ENST00000395756 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
SREBF1-204ENST00000395756 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
SREBF1-204ENST00000395756 KRTAP10-5P60370 271 aa7.27□□□□□ -1.25
SREBF1-204ENST00000395756 MT1XP80297 61 aa7.27□□□□□ -1.25
SREBF1-204ENST00000395756 LCE3AQ5TA76 89 aa7.26□□□□□ -1.25
SREBF1-204ENST00000395756 LCE2BO14633 110 aa7.22□□□□□ -1.25
SREBF1-204ENST00000395756 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
SREBF1-204ENST00000395756 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
SREBF1-204ENST00000395756 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
SREBF1-204ENST00000395756 KMT2DO14686 5537 aa7.14□□□□□ -1.27
SREBF1-204ENST00000395756 KRTAP10-7P60409 375 aaPredicted RBP7.13□□□□□ -1.27
SREBF1-204ENST00000395756 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
SREBF1-204ENST00000395756 INE1O15225 51 aa7.08□□□□□ -1.28
SREBF1-204ENST00000395756 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
SREBF1-204ENST00000395756 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
SREBF1-204ENST00000395756 KRTAP12-3P60328 96 aa6.9□□□□□ -1.3
SREBF1-204ENST00000395756 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
SREBF1-204ENST00000395756 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
SREBF1-204ENST00000395756 SSPOA2VEC9 5147 aa6.83□□□□□ -1.32
SREBF1-204ENST00000395756 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
SREBF1-204ENST00000395756 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
SREBF1-204ENST00000395756 KRTAP19-6Q3LI70 58 aa6.45□□□□□ -1.38
SREBF1-204ENST00000395756 LCE3CQ5T5A8 94 aa6.44□□□□□ -1.38
SREBF1-204ENST00000395756 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
SREBF1-204ENST00000395756 FCGBPQ9Y6R7 5405 aaPredicted RBP6.43□□□□□ -1.38
SREBF1-204ENST00000395756 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
SREBF1-204ENST00000395756 MT1EP04732 61 aa6.3□□□□□ -1.4
SREBF1-204ENST00000395756 MACF1Q9UPN3 7388 aaKnown RBP6.27□□□□□ -1.41
SREBF1-204ENST00000395756 MT1LQ93083 61 aa6.25□□□□□ -1.41
SREBF1-204ENST00000395756 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms