RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 FRAS1Q86XX4 4008 aa2.89□□□□□ -1.95
FGD4-201ENST00000395740 DNAH8Q96JB1 4490 aa2.89□□□□□ -1.95
FGD4-201ENST00000395740 HERC1Q15751 4861 aa2.89□□□□□ -1.95
FGD4-201ENST00000395740 RPS29P62273 56 aaKnown RBP2.88□□□□□ -1.95
FGD4-201ENST00000395740 CSAG1Q6PB30 78 aa2.88□□□□□ -1.95
FGD4-201ENST00000395740 ROMO1P60602 79 aa2.87□□□□□ -1.95
FGD4-201ENST00000395740 ANAPC11Q9NYG5 84 aa2.87□□□□□ -1.95
FGD4-201ENST00000395740 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
FGD4-201ENST00000395740 LY6G6CO95867 125 aa2.86□□□□□ -1.95
FGD4-201ENST00000395740 DNAH5Q8TE73 4624 aa2.86□□□□□ -1.95
FGD4-201ENST00000395740 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
FGD4-201ENST00000395740 C1orf134Q5TEV5 83 aa2.86□□□□□ -1.95
FGD4-201ENST00000395740 KRTAP13-2Q52LG2 175 aa2.85□□□□□ -1.95
FGD4-201ENST00000395740 SACSQ9NZJ4 4579 aa2.85□□□□□ -1.95
FGD4-201ENST00000395740 FAT2Q9NYQ8 4349 aa2.85□□□□□ -1.95
FGD4-201ENST00000395740 SPINK1P00995 79 aa2.85□□□□□ -1.95
FGD4-201ENST00000395740 Q6ZSA8 131 aa2.85□□□□□ -1.95
FGD4-201ENST00000395740 PKHD1P08F94 4074 aa2.83□□□□□ -1.96
FGD4-201ENST00000395740 KMT2CQ8NEZ4 4911 aaKnown RBP2.83□□□□□ -1.96
FGD4-201ENST00000395740 PKD1P98161 4303 aa2.82□□□□□ -1.96
FGD4-201ENST00000395740 LRP1BQ9NZR2 4599 aa2.82□□□□□ -1.96
FGD4-201ENST00000395740 A8MUU9 505 aa2.82□□□□□ -1.96
FGD4-201ENST00000395740 KRTAP1-4P0C5Y4 121 aa2.82□□□□□ -1.96
FGD4-201ENST00000395740 KRTAP10-2P60368 255 aa2.81□□□□□ -1.96
FGD4-201ENST00000395740 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
FGD4-201ENST00000395740 SEC61BP60468 96 aaKnown RBP2.79□□□□□ -1.96
FGD4-201ENST00000395740 C20orf166-AS1Q96NR2 134 aa2.79□□□□□ -1.96
FGD4-201ENST00000395740 SSPOA2VEC9 5147 aa2.78□□□□□ -1.96
FGD4-201ENST00000395740 TYMSOSQ8TAI1 123 aa2.77□□□□□ -1.97
FGD4-201ENST00000395740 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
FGD4-201ENST00000395740 A0A1B0GU33 70 aa2.77□□□□□ -1.97
FGD4-201ENST00000395740 H0YAA0 97 aa2.77□□□□□ -1.97
FGD4-201ENST00000395740 H1FX-AS1Q4G0G2 97 aa2.77□□□□□ -1.97
FGD4-201ENST00000395740 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
FGD4-201ENST00000395740 LINC00304Q8N9R0 145 aa2.76□□□□□ -1.97
FGD4-201ENST00000395740 MUC2Q02817 5179 aa2.76□□□□□ -1.97
FGD4-201ENST00000395740 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
FGD4-201ENST00000395740 K7ERS5 55 aa2.76□□□□□ -1.97
FGD4-201ENST00000395740 FAT1Q14517 4588 aa2.75□□□□□ -1.97
FGD4-201ENST00000395740 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
FGD4-201ENST00000395740 P0C880 135 aa2.74□□□□□ -1.97
FGD4-201ENST00000395740 Q8N1X5 172 aa2.73□□□□□ -1.97
FGD4-201ENST00000395740 COX6B2Q6YFQ2 88 aa2.72□□□□□ -1.97
FGD4-201ENST00000395740 APOBP04114 4563 aaKnown RBP2.71□□□□□ -1.98
FGD4-201ENST00000395740 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
FGD4-201ENST00000395740 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
FGD4-201ENST00000395740 SMR3BP02814 79 aaPredicted RBP2.69□□□□□ -1.98
FGD4-201ENST00000395740 FAT4Q6V0I7 4981 aa2.68□□□□□ -1.98
FGD4-201ENST00000395740 RPL37P61927 97 aaKnown RBP2.67□□□□□ -1.98
FGD4-201ENST00000395740 KRTAP15-1Q3LI76 137 aa2.67□□□□□ -1.98
FGD4-201ENST00000395740 A0A1B0GVY2 172 aa2.66□□□□□ -1.98
FGD4-201ENST00000395740 PKHD1L1Q86WI1 4243 aa2.66□□□□□ -1.98
FGD4-201ENST00000395740 LRP1Q07954 4544 aaKnown RBP2.65□□□□□ -1.99
FGD4-201ENST00000395740 ABCA13Q86UQ4 5058 aa2.65□□□□□ -1.99
FGD4-201ENST00000395740 HSPG2P98160 4391 aa2.65□□□□□ -1.99
FGD4-201ENST00000395740 KRTAP10-6P60371 365 aaPredicted RBP2.64□□□□□ -1.99
FGD4-201ENST00000395740 KRTAP10-4P60372 401 aaPredicted RBP2.63□□□□□ -1.99
FGD4-201ENST00000395740 SPINT4Q6UDR6 99 aa2.62□□□□□ -1.99
FGD4-201ENST00000395740 C9orf92A6NGG3 77 aa2.62□□□□□ -1.99
FGD4-201ENST00000395740 FLG2Q5D862 2391 aaPredicted RBP2.62□□□□□ -1.99
FGD4-201ENST00000395740 MYCBP2O75592 4640 aa2.61□□□□□ -1.99
FGD4-201ENST00000395740 KRTAP9-3Q9BYQ3 159 aa2.61□□□□□ -1.99
FGD4-201ENST00000395740 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
FGD4-201ENST00000395740 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
FGD4-201ENST00000395740 S4R3F8 94 aa2.59□□□□□ -2
FGD4-201ENST00000395740 TPRXLQ17RH7 258 aa2.58□□□□□ -2
FGD4-201ENST00000395740 TNXBP22105 4242 aa2.57□□□□□ -2
FGD4-201ENST00000395740 CRIPTQ9P021 101 aa2.57□□□□□ -2
FGD4-201ENST00000395740 DMBT1Q9UGM3 2413 aaPredicted RBP2.57□□□□□ -2
FGD4-201ENST00000395740 M0QZ58 72 aa2.56□□□□□ -2
FGD4-201ENST00000395740 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
FGD4-201ENST00000395740 KRTAP10-8P60410 259 aa2.56□□□□□ -2
FGD4-201ENST00000395740 Q5VSD8 79 aa2.54□□□□□ -2
FGD4-201ENST00000395740 KRTAP12-1P59990 96 aa2.53□□□□□ -2.01
FGD4-201ENST00000395740 LUZP6Q538Z0 58 aa2.53□□□□□ -2.01
FGD4-201ENST00000395740 NEBP20929 6669 aa2.52□□□□□ -2.01
FGD4-201ENST00000395740 A0A0D9SG42 100 aa2.5□□□□□ -2.01
FGD4-201ENST00000395740 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
FGD4-201ENST00000395740 LPAP08519 4548 aa2.48□□□□□ -2.01
FGD4-201ENST00000395740 MT1HL1P0DM35 61 aa2.46□□□□□ -2.01
FGD4-201ENST00000395740 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.01
FGD4-201ENST00000395740 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
FGD4-201ENST00000395740 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
FGD4-201ENST00000395740 LRP2P98164 4655 aa2.45□□□□□ -2.02
FGD4-201ENST00000395740 PP632Q6XCG6 107 aa2.43□□□□□ -2.02
FGD4-201ENST00000395740 CAMK2N1Q7Z7J9 78 aa2.42□□□□□ -2.02
FGD4-201ENST00000395740 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
FGD4-201ENST00000395740 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
FGD4-201ENST00000395740 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
FGD4-201ENST00000395740 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
FGD4-201ENST00000395740 R4GN34 69 aa2.38□□□□□ -2.03
FGD4-201ENST00000395740 HMCN2Q8NDA2 5059 aa2.37□□□□□ -2.03
FGD4-201ENST00000395740 PRO2289Q9P1D8 64 aa2.32□□□□□ -2.04
FGD4-201ENST00000395740 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
FGD4-201ENST00000395740 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
FGD4-201ENST00000395740 KRTAP4-1Q9BYQ7 146 aa2.29□□□□□ -2.04
FGD4-201ENST00000395740 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
FGD4-201ENST00000395740 RNF213Q63HN8 5207 aa2.28□□□□□ -2.04
FGD4-201ENST00000395740 INE1O15225 51 aa2.28□□□□□ -2.04
FGD4-201ENST00000395740 KRTAP19-2Q3LHN2 52 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms