RNA–Protein interactions for RNA: ENST00000395603.7

ATRX-202, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRX, Length 10,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-202ENST00000395603 KMT2CQ8NEZ4 4911 aaKnown RBP2.43□□□□□ -2.02
ATRX-202ENST00000395603 STARD9Q9P2P6 4700 aa2.41□□□□□ -2.02
ATRX-202ENST00000395603 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
ATRX-202ENST00000395603 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
ATRX-202ENST00000395603 KRTAP10-10P60014 251 aa2.38□□□□□ -2.03
ATRX-202ENST00000395603 KRTAP3-1Q9BYR8 98 aa2.35□□□□□ -2.03
ATRX-202ENST00000395603 SACSQ9NZJ4 4579 aa2.35□□□□□ -2.03
ATRX-202ENST00000395603 RYR1P21817 5038 aa2.35□□□□□ -2.03
ATRX-202ENST00000395603 DNAH5Q8TE73 4624 aa2.35□□□□□ -2.03
ATRX-202ENST00000395603 KRTAP10-12P60413 245 aa2.35□□□□□ -2.03
ATRX-202ENST00000395603 KRTAP3-2Q9BYR7 98 aa2.35□□□□□ -2.03
ATRX-202ENST00000395603 ABCA13Q86UQ4 5058 aa2.35□□□□□ -2.03
ATRX-202ENST00000395603 PRKDCP78527 4128 aaKnown RBP2.34□□□□□ -2.04
ATRX-202ENST00000395603 ANK2Q01484 3957 aa2.34□□□□□ -2.04
ATRX-202ENST00000395603 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
ATRX-202ENST00000395603 FAT1Q14517 4588 aa2.33□□□□□ -2.04
ATRX-202ENST00000395603 ALMS1Q8TCU4 4167 aa2.32□□□□□ -2.04
ATRX-202ENST00000395603 SPRR2GQ9BYE4 73 aa2.32□□□□□ -2.04
ATRX-202ENST00000395603 LRP1BQ9NZR2 4599 aa2.31□□□□□ -2.04
ATRX-202ENST00000395603 COL7A1Q02388 2944 aa2.31□□□□□ -2.04
ATRX-202ENST00000395603 DNAH11Q96DT5 4516 aa2.3□□□□□ -2.04
ATRX-202ENST00000395603 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
ATRX-202ENST00000395603 DNAH1Q9P2D7 4330 aa2.29□□□□□ -2.04
ATRX-202ENST00000395603 KRTAP10-4P60372 401 aaPredicted RBP2.29□□□□□ -2.04
ATRX-202ENST00000395603 DNAH10Q8IVF4 4471 aa2.29□□□□□ -2.04
ATRX-202ENST00000395603 KRTAP4-5Q9BYR2 181 aa2.29□□□□□ -2.04
ATRX-202ENST00000395603 HERC2O95714 4834 aa2.28□□□□□ -2.04
ATRX-202ENST00000395603 DNAH2Q9P225 4427 aa2.28□□□□□ -2.04
ATRX-202ENST00000395603 KRTAP3-3Q9BYR6 98 aa2.28□□□□□ -2.05
ATRX-202ENST00000395603 VPS13DQ5THJ4 4388 aa2.27□□□□□ -2.05
ATRX-202ENST00000395603 KRTAP17-1Q9BYP8 105 aa2.27□□□□□ -2.05
ATRX-202ENST00000395603 SRRM2Q9UQ35 2752 aaKnown RBP2.27□□□□□ -2.05
ATRX-202ENST00000395603 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
ATRX-202ENST00000395603 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
ATRX-202ENST00000395603 DNAH17Q9UFH2 4485 aa2.25□□□□□ -2.05
ATRX-202ENST00000395603 MT1HL1P0DM35 61 aa2.25□□□□□ -2.05
ATRX-202ENST00000395603 FAT2Q9NYQ8 4349 aa2.24□□□□□ -2.05
ATRX-202ENST00000395603 DYNC2H1Q8NCM8 4307 aaKnown RBP2.22□□□□□ -2.05
ATRX-202ENST00000395603 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
ATRX-202ENST00000395603 CSMD3Q7Z407 3707 aa2.21□□□□□ -2.05
ATRX-202ENST00000395603 DNAH3Q8TD57 4116 aa2.2□□□□□ -2.06
ATRX-202ENST00000395603 CMYA5Q8N3K9 4069 aa2.2□□□□□ -2.06
ATRX-202ENST00000395603 KRTAP19-8Q3LI54 63 aa2.19□□□□□ -2.06
ATRX-202ENST00000395603 DNAH8Q96JB1 4490 aa2.19□□□□□ -2.06
ATRX-202ENST00000395603 HERC1Q15751 4861 aa2.17□□□□□ -2.06
ATRX-202ENST00000395603 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
ATRX-202ENST00000395603 LRP1Q07954 4544 aaKnown RBP2.15□□□□□ -2.06
ATRX-202ENST00000395603 LYSTQ99698 3801 aa2.15□□□□□ -2.07
ATRX-202ENST00000395603 HMCN2Q8NDA2 5059 aa2.14□□□□□ -2.07
ATRX-202ENST00000395603 KMT2AQ03164 3969 aa2.13□□□□□ -2.07
ATRX-202ENST00000395603 RNF213Q63HN8 5207 aa2.12□□□□□ -2.07
ATRX-202ENST00000395603 DNAH7Q8WXX0 4024 aa2.11□□□□□ -2.07
ATRX-202ENST00000395603 VPS13BQ7Z7G8 4022 aa2.1□□□□□ -2.07
ATRX-202ENST00000395603 PKD1P98161 4303 aa2.09□□□□□ -2.08
ATRX-202ENST00000395603 HSPG2P98160 4391 aa2.08□□□□□ -2.08
ATRX-202ENST00000395603 DNAH6Q9C0G6 4158 aa2.08□□□□□ -2.08
ATRX-202ENST00000395603 FAT3Q8TDW7 4589 aa2.07□□□□□ -2.08
ATRX-202ENST00000395603 LRP2P98164 4655 aa2.06□□□□□ -2.08
ATRX-202ENST00000395603 PKHD1P08F94 4074 aa2.06□□□□□ -2.08
ATRX-202ENST00000395603 FRAS1Q86XX4 4008 aa2.05□□□□□ -2.08
ATRX-202ENST00000395603 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
ATRX-202ENST00000395603 FAT4Q6V0I7 4981 aa2.04□□□□□ -2.08
ATRX-202ENST00000395603 MT1FP04733 61 aa2.02□□□□□ -2.09
ATRX-202ENST00000395603 MT1GP13640 62 aa2.02□□□□□ -2.09
ATRX-202ENST00000395603 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
ATRX-202ENST00000395603 HECTD4Q9Y4D8 3996 aa2□□□□□ -2.09
ATRX-202ENST00000395603 LPAP08519 4548 aa1.99□□□□□ -2.09
ATRX-202ENST00000395603 MUC2Q02817 5179 aa1.99□□□□□ -2.09
ATRX-202ENST00000395603 MT1LQ93083 61 aa1.99□□□□□ -2.09
ATRX-202ENST00000395603 KRTAP4-1Q9BYQ7 146 aa1.98□□□□□ -2.09
ATRX-202ENST00000395603 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
ATRX-202ENST00000395603 MT1EP04732 61 aa1.97□□□□□ -2.09
ATRX-202ENST00000395603 SPRR2AP35326 72 aa1.96□□□□□ -2.1
ATRX-202ENST00000395603 KRTAP10-5P60370 271 aa1.96□□□□□ -2.1
ATRX-202ENST00000395603 SPRR2BP35325 72 aa1.95□□□□□ -2.1
ATRX-202ENST00000395603 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
ATRX-202ENST00000395603 LCE1AQ5T7P2 110 aa1.92□□□□□ -2.1
ATRX-202ENST00000395603 PKHD1L1Q86WI1 4243 aa1.91□□□□□ -2.1
ATRX-202ENST00000395603 MT2AP02795 61 aa1.91□□□□□ -2.1
ATRX-202ENST00000395603 LCE2CQ5TA81 110 aa1.91□□□□□ -2.1
ATRX-202ENST00000395603 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
ATRX-202ENST00000395603 MT1HP80294 61 aa1.89□□□□□ -2.11
ATRX-202ENST00000395603 MT1AP04731 61 aa1.87□□□□□ -2.11
ATRX-202ENST00000395603 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
ATRX-202ENST00000395603 TNXBP22105 4242 aa1.85□□□□□ -2.11
ATRX-202ENST00000395603 FLGP20930 4061 aaPredicted RBP1.84□□□□□ -2.11
ATRX-202ENST00000395603 KRTAP19-1Q8IUB9 90 aa1.84□□□□□ -2.11
ATRX-202ENST00000395603 USH2AO75445 5202 aa1.82□□□□□ -2.12
ATRX-202ENST00000395603 MT1MQ8N339 61 aa1.81□□□□□ -2.12
ATRX-202ENST00000395603 KRTAP19-2Q3LHN2 52 aa1.8□□□□□ -2.12
ATRX-202ENST00000395603 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
ATRX-202ENST00000395603 LCE2BO14633 110 aa1.78□□□□□ -2.12
ATRX-202ENST00000395603 LCE2DQ5TA82 110 aaPredicted RBP1.78□□□□□ -2.12
ATRX-202ENST00000395603 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
ATRX-202ENST00000395603 KRTAP19-3Q7Z4W3 81 aa1.78□□□□□ -2.12
ATRX-202ENST00000395603 MT1XP80297 61 aa1.76□□□□□ -2.13
ATRX-202ENST00000395603 MUC17Q685J3 4493 aa1.76□□□□□ -2.13
ATRX-202ENST00000395603 KRTAP19-5Q3LI72 72 aa1.76□□□□□ -2.13
ATRX-202ENST00000395603 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
ATRX-202ENST00000395603 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms