RNA–Protein interactions for RNA: ENST00000395495.5

A1CF-207, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5 BASIC

Gene A1CF, Length 9,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-207ENST00000395495 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
A1CF-207ENST00000395495 LCE2DQ5TA82 110 aaPredicted RBP2.38□□□□□ -2.03
A1CF-207ENST00000395495 LOC400499M0QZD8 3231 aa2.37□□□□□ -2.03
A1CF-207ENST00000395495 FAT2Q9NYQ8 4349 aa2.36□□□□□ -2.03
A1CF-207ENST00000395495 ABCA13Q86UQ4 5058 aa2.36□□□□□ -2.03
A1CF-207ENST00000395495 KRTAP12-3P60328 96 aa2.35□□□□□ -2.03
A1CF-207ENST00000395495 KRTAP8-1Q8IUC2 63 aa2.35□□□□□ -2.03
A1CF-207ENST00000395495 KRTAP10-5P60370 271 aa2.34□□□□□ -2.03
A1CF-207ENST00000395495 DNAH10Q8IVF4 4471 aa2.33□□□□□ -2.04
A1CF-207ENST00000395495 SMG1Q96Q15 3661 aaKnown RBP2.33□□□□□ -2.04
A1CF-207ENST00000395495 EPPK1P58107 5090 aaKnown RBP2.32□□□□□ -2.04
A1CF-207ENST00000395495 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.31□□□□□ -2.04
A1CF-207ENST00000395495 KRTAP23-1A1A580 65 aa2.31□□□□□ -2.04
A1CF-207ENST00000395495 VPS13CQ709C8 3753 aa2.3□□□□□ -2.04
A1CF-207ENST00000395495 ZFHX3Q15911 3703 aa2.29□□□□□ -2.04
A1CF-207ENST00000395495 SPRR2EP22531 72 aa2.29□□□□□ -2.04
A1CF-207ENST00000395495 SPRR2BP35325 72 aa2.29□□□□□ -2.04
A1CF-207ENST00000395495 SPRR2AP35326 72 aa2.29□□□□□ -2.04
A1CF-207ENST00000395495 KRTAP10-7P60409 375 aaPredicted RBP2.29□□□□□ -2.04
A1CF-207ENST00000395495 DNAH9Q9NYC9 4486 aa2.29□□□□□ -2.04
A1CF-207ENST00000395495 RELNP78509 3460 aa2.28□□□□□ -2.04
A1CF-207ENST00000395495 AKAP9Q99996 3911 aa2.27□□□□□ -2.05
A1CF-207ENST00000395495 KIAA1109Q2LD37 5005 aa2.27□□□□□ -2.05
A1CF-207ENST00000395495 NBPF19A0A087WUL8 3843 aa2.26□□□□□ -2.05
A1CF-207ENST00000395495 KRTAP10-4P60372 401 aaPredicted RBP2.25□□□□□ -2.05
A1CF-207ENST00000395495 FAT1Q14517 4588 aa2.24□□□□□ -2.05
A1CF-207ENST00000395495 HUWE1Q7Z6Z7 4374 aaKnown RBP2.23□□□□□ -2.05
A1CF-207ENST00000395495 KRTAP3-1Q9BYR8 98 aa2.23□□□□□ -2.05
A1CF-207ENST00000395495 DNAH5Q8TE73 4624 aa2.23□□□□□ -2.05
A1CF-207ENST00000395495 CSMD2Q7Z408 3487 aa2.22□□□□□ -2.05
A1CF-207ENST00000395495 ALMS1Q8TCU4 4167 aa2.22□□□□□ -2.05
A1CF-207ENST00000395495 ZNF469Q96JG9 3925 aaPredicted RBP2.22□□□□□ -2.05
A1CF-207ENST00000395495 MYCBP2O75592 4640 aa2.22□□□□□ -2.05
A1CF-207ENST00000395495 CSMD1Q96PZ7 3565 aa2.22□□□□□ -2.05
A1CF-207ENST00000395495 HYDINQ4G0P3 5121 aa2.22□□□□□ -2.05
A1CF-207ENST00000395495 KMT2CQ8NEZ4 4911 aaKnown RBP2.22□□□□□ -2.05
A1CF-207ENST00000395495 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
A1CF-207ENST00000395495 SPRR2DP22532 72 aa2.21□□□□□ -2.06
A1CF-207ENST00000395495 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
A1CF-207ENST00000395495 MT1HP80294 61 aa2.21□□□□□ -2.06
A1CF-207ENST00000395495 KRTAP19-1Q8IUB9 90 aa2.21□□□□□ -2.06
A1CF-207ENST00000395495 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
A1CF-207ENST00000395495 CUBNO60494 3623 aa2.2□□□□□ -2.06
A1CF-207ENST00000395495 APOBP04114 4563 aaKnown RBP2.2□□□□□ -2.06
A1CF-207ENST00000395495 LCE2CQ5TA81 110 aa2.19□□□□□ -2.06
A1CF-207ENST00000395495 DNAH17Q9UFH2 4485 aa2.19□□□□□ -2.06
A1CF-207ENST00000395495 SVEP1Q4LDE5 3571 aa2.19□□□□□ -2.06
A1CF-207ENST00000395495 DNAH2Q9P225 4427 aa2.18□□□□□ -2.06
A1CF-207ENST00000395495 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
A1CF-207ENST00000395495 UBR4Q5T4S7 5183 aa2.17□□□□□ -2.06
A1CF-207ENST00000395495 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
A1CF-207ENST00000395495 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
A1CF-207ENST00000395495 LRP2P98164 4655 aa2.16□□□□□ -2.06
A1CF-207ENST00000395495 CMYA5Q8N3K9 4069 aa2.16□□□□□ -2.06
A1CF-207ENST00000395495 DYNC2H1Q8NCM8 4307 aaKnown RBP2.16□□□□□ -2.06
A1CF-207ENST00000395495 HSPG2P98160 4391 aa2.15□□□□□ -2.07
A1CF-207ENST00000395495 TRRAPQ9Y4A5 3859 aa2.15□□□□□ -2.07
A1CF-207ENST00000395495 KRTAP19-4Q3LI73 84 aa2.14□□□□□ -2.07
A1CF-207ENST00000395495 DNAH1Q9P2D7 4330 aa2.12□□□□□ -2.07
A1CF-207ENST00000395495 DNAH3Q8TD57 4116 aa2.12□□□□□ -2.07
A1CF-207ENST00000395495 NEBP20929 6669 aa2.12□□□□□ -2.07
A1CF-207ENST00000395495 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
A1CF-207ENST00000395495 KRTAP2-1Q9BYU5 128 aa2.11□□□□□ -2.07
A1CF-207ENST00000395495 LCE2AQ5TA79 106 aaPredicted RBP2.11□□□□□ -2.07
A1CF-207ENST00000395495 ANK2Q01484 3957 aa2.11□□□□□ -2.07
A1CF-207ENST00000395495 KRTAP3-2Q9BYR7 98 aa2.1□□□□□ -2.07
A1CF-207ENST00000395495 FSIP2Q5CZC0 6907 aa2.07□□□□□ -2.08
A1CF-207ENST00000395495 KRTAP3-3Q9BYR6 98 aa2.06□□□□□ -2.08
A1CF-207ENST00000395495 HMCN2Q8NDA2 5059 aa2.06□□□□□ -2.08
A1CF-207ENST00000395495 LRP1Q07954 4544 aaKnown RBP2.05□□□□□ -2.08
A1CF-207ENST00000395495 STARD9Q9P2P6 4700 aa2.05□□□□□ -2.08
A1CF-207ENST00000395495 HECTD4Q9Y4D8 3996 aa2.05□□□□□ -2.08
A1CF-207ENST00000395495 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
A1CF-207ENST00000395495 KRTAP4-1Q9BYQ7 146 aa2.03□□□□□ -2.08
A1CF-207ENST00000395495 FAT4Q6V0I7 4981 aa2.03□□□□□ -2.08
A1CF-207ENST00000395495 GPR98Q8WXG9 6306 aa2.03□□□□□ -2.08
A1CF-207ENST00000395495 LYSTQ99698 3801 aa2.02□□□□□ -2.09
A1CF-207ENST00000395495 LCE2BO14633 110 aa2.02□□□□□ -2.09
A1CF-207ENST00000395495 MT2AP02795 61 aa2□□□□□ -2.09
A1CF-207ENST00000395495 VPS13DQ5THJ4 4388 aa2□□□□□ -2.09
A1CF-207ENST00000395495 DNAH7Q8WXX0 4024 aa1.99□□□□□ -2.09
A1CF-207ENST00000395495 LCE3BQ5TA77 95 aa1.98□□□□□ -2.09
A1CF-207ENST00000395495 LCE3CQ5T5A8 94 aa1.97□□□□□ -2.09
A1CF-207ENST00000395495 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
A1CF-207ENST00000395495 PRKDCP78527 4128 aaKnown RBP1.96□□□□□ -2.1
A1CF-207ENST00000395495 DNAH8Q96JB1 4490 aa1.96□□□□□ -2.1
A1CF-207ENST00000395495 MT4P47944 62 aa1.95□□□□□ -2.1
A1CF-207ENST00000395495 KRTAP19-6Q3LI70 58 aa1.94□□□□□ -2.1
A1CF-207ENST00000395495 CSMD3Q7Z407 3707 aa1.94□□□□□ -2.1
A1CF-207ENST00000395495 SPRR2GQ9BYE4 73 aa1.94□□□□□ -2.1
A1CF-207ENST00000395495 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
A1CF-207ENST00000395495 MT1FP04733 61 aa1.93□□□□□ -2.1
A1CF-207ENST00000395495 MUC17Q685J3 4493 aa1.92□□□□□ -2.1
A1CF-207ENST00000395495 KRTAP4-9Q9BYQ8 210 aa1.92□□□□□ -2.1
A1CF-207ENST00000395495 DNAH6Q9C0G6 4158 aa1.91□□□□□ -2.1
A1CF-207ENST00000395495 FRAS1Q86XX4 4008 aa1.91□□□□□ -2.1
A1CF-207ENST00000395495 PKHD1L1Q86WI1 4243 aa1.88□□□□□ -2.11
A1CF-207ENST00000395495 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
A1CF-207ENST00000395495 PKD1P98161 4303 aa1.85□□□□□ -2.11
A1CF-207ENST00000395495 MT1GP13640 62 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms