RNA–Protein interactions for RNA: ENST00000395469.6

SNCAIP-205, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 3,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-205ENST00000395469 K7ERS5 55 aa6.25□□□□□ -1.41
SNCAIP-205ENST00000395469 KRTAP10-4P60372 401 aaPredicted RBP6.25□□□□□ -1.41
SNCAIP-205ENST00000395469 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
SNCAIP-205ENST00000395469 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
SNCAIP-205ENST00000395469 DMBT1Q9UGM3 2413 aaPredicted RBP6.2□□□□□ -1.42
SNCAIP-205ENST00000395469 H1FX-AS1Q4G0G2 97 aa6.19□□□□□ -1.42
SNCAIP-205ENST00000395469 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
SNCAIP-205ENST00000395469 MYCBP2O75592 4640 aa6.13□□□□□ -1.43
SNCAIP-205ENST00000395469 LUZP6Q538Z0 58 aa6.12□□□□□ -1.43
SNCAIP-205ENST00000395469 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
SNCAIP-205ENST00000395469 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
SNCAIP-205ENST00000395469 FAT3Q8TDW7 4589 aa6.1□□□□□ -1.43
SNCAIP-205ENST00000395469 RYR3Q15413 4870 aa6.08□□□□□ -1.44
SNCAIP-205ENST00000395469 TNXBP22105 4242 aa6.08□□□□□ -1.44
SNCAIP-205ENST00000395469 HSPG2P98160 4391 aa6.08□□□□□ -1.44
SNCAIP-205ENST00000395469 Q5VSD8 79 aa6.07□□□□□ -1.44
SNCAIP-205ENST00000395469 COX6B2Q6YFQ2 88 aa6.04□□□□□ -1.44
SNCAIP-205ENST00000395469 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
SNCAIP-205ENST00000395469 RYR1P21817 5038 aa6.02□□□□□ -1.45
SNCAIP-205ENST00000395469 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
SNCAIP-205ENST00000395469 KRTAP10-8P60410 259 aa6.01□□□□□ -1.45
SNCAIP-205ENST00000395469 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
SNCAIP-205ENST00000395469 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
SNCAIP-205ENST00000395469 A0A0D9SG42 100 aa5.95□□□□□ -1.46
SNCAIP-205ENST00000395469 XP32Q5T750 250 aa5.94□□□□□ -1.46
SNCAIP-205ENST00000395469 EPPK1P58107 5090 aaKnown RBP5.88□□□□□ -1.47
SNCAIP-205ENST00000395469 LPAP08519 4548 aa5.87□□□□□ -1.47
SNCAIP-205ENST00000395469 LRP2P98164 4655 aa5.86□□□□□ -1.47
SNCAIP-205ENST00000395469 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
SNCAIP-205ENST00000395469 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
SNCAIP-205ENST00000395469 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.47
SNCAIP-205ENST00000395469 S4R3F8 94 aa5.82□□□□□ -1.48
SNCAIP-205ENST00000395469 ABCA13Q86UQ4 5058 aa5.8□□□□□ -1.48
SNCAIP-205ENST00000395469 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
SNCAIP-205ENST00000395469 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
SNCAIP-205ENST00000395469 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
SNCAIP-205ENST00000395469 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
SNCAIP-205ENST00000395469 PLAC4Q8WY50 150 aa5.66□□□□□ -1.5
SNCAIP-205ENST00000395469 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
SNCAIP-205ENST00000395469 HERC2O95714 4834 aa5.57□□□□□ -1.52
SNCAIP-205ENST00000395469 MUC2Q02817 5179 aa5.5□□□□□ -1.53
SNCAIP-205ENST00000395469 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
SNCAIP-205ENST00000395469 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
SNCAIP-205ENST00000395469 M0QZ58 72 aa5.46□□□□□ -1.53
SNCAIP-205ENST00000395469 R4GN34 69 aa5.43□□□□□ -1.54
SNCAIP-205ENST00000395469 CAMK2N1Q7Z7J9 78 aa5.41□□□□□ -1.54
SNCAIP-205ENST00000395469 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
SNCAIP-205ENST00000395469 HERC1Q15751 4861 aa5.36□□□□□ -1.55
SNCAIP-205ENST00000395469 BIRC6Q9NR09 4857 aa5.32□□□□□ -1.56
SNCAIP-205ENST00000395469 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
SNCAIP-205ENST00000395469 PCLOQ9Y6V0 5065 aa5.28□□□□□ -1.56
SNCAIP-205ENST00000395469 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
SNCAIP-205ENST00000395469 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
SNCAIP-205ENST00000395469 FAT4Q6V0I7 4981 aa5.22□□□□□ -1.57
SNCAIP-205ENST00000395469 HMCN2Q8NDA2 5059 aa5.21□□□□□ -1.58
SNCAIP-205ENST00000395469 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
SNCAIP-205ENST00000395469 RNF213Q63HN8 5207 aa5.15□□□□□ -1.58
SNCAIP-205ENST00000395469 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
SNCAIP-205ENST00000395469 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
SNCAIP-205ENST00000395469 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
SNCAIP-205ENST00000395469 M0R2T5 61 aa5.02□□□□□ -1.61
SNCAIP-205ENST00000395469 INE1O15225 51 aa5.02□□□□□ -1.61
SNCAIP-205ENST00000395469 LCE2CQ5TA81 110 aa5.02□□□□□ -1.61
SNCAIP-205ENST00000395469 TNP1P09430 55 aa4.92□□□□□ -1.62
SNCAIP-205ENST00000395469 MT1HP80294 61 aa4.91□□□□□ -1.62
SNCAIP-205ENST00000395469 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
SNCAIP-205ENST00000395469 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
SNCAIP-205ENST00000395469 KRTAP10-10P60014 251 aa4.87□□□□□ -1.63
SNCAIP-205ENST00000395469 MT1FP04733 61 aa4.83□□□□□ -1.64
SNCAIP-205ENST00000395469 MT2AP02795 61 aa4.82□□□□□ -1.64
SNCAIP-205ENST00000395469 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
SNCAIP-205ENST00000395469 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
SNCAIP-205ENST00000395469 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
SNCAIP-205ENST00000395469 MT1BP07438 61 aa4.64□□□□□ -1.67
SNCAIP-205ENST00000395469 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
SNCAIP-205ENST00000395469 MT1XP80297 61 aa4.6□□□□□ -1.67
SNCAIP-205ENST00000395469 USH2AO75445 5202 aa4.57□□□□□ -1.68
SNCAIP-205ENST00000395469 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
SNCAIP-205ENST00000395469 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
SNCAIP-205ENST00000395469 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
SNCAIP-205ENST00000395469 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
SNCAIP-205ENST00000395469 LCE2DQ5TA82 110 aaPredicted RBP4.5□□□□□ -1.69
SNCAIP-205ENST00000395469 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
SNCAIP-205ENST00000395469 KMT2DO14686 5537 aa4.46□□□□□ -1.7
SNCAIP-205ENST00000395469 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
SNCAIP-205ENST00000395469 LCE2BO14633 110 aa4.43□□□□□ -1.7
SNCAIP-205ENST00000395469 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
SNCAIP-205ENST00000395469 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
SNCAIP-205ENST00000395469 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
SNCAIP-205ENST00000395469 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
SNCAIP-205ENST00000395469 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
SNCAIP-205ENST00000395469 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
SNCAIP-205ENST00000395469 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
SNCAIP-205ENST00000395469 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
SNCAIP-205ENST00000395469 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
SNCAIP-205ENST00000395469 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
SNCAIP-205ENST00000395469 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
SNCAIP-205ENST00000395469 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
SNCAIP-205ENST00000395469 MT1EP04732 61 aa3.97□□□□□ -1.77
SNCAIP-205ENST00000395469 MT1LQ93083 61 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms