RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 KRTAP2-1Q9BYU5 128 aa8.93□□□□□ -0.98
TRAF4-203ENST00000394925 PRO2289Q9P1D8 64 aa8.91□□□□□ -0.98
TRAF4-203ENST00000394925 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
TRAF4-203ENST00000394925 KRTAP8-1Q8IUC2 63 aa8.89□□□□□ -0.99
TRAF4-203ENST00000394925 CYP4F30PQ9H0H9 118 aa8.89□□□□□ -0.99
TRAF4-203ENST00000394925 LCE1AQ5T7P2 110 aa8.88□□□□□ -0.99
TRAF4-203ENST00000394925 MT1XP80297 61 aa8.87□□□□□ -0.99
TRAF4-203ENST00000394925 A8MUN3 132 aa8.82□□□□□ -1
TRAF4-203ENST00000394925 H0YAA0 97 aa8.82□□□□□ -1
TRAF4-203ENST00000394925 NDUFC1O43677 76 aa8.8□□□□□ -1
TRAF4-203ENST00000394925 SPCS1Q9Y6A9 102 aa8.8□□□□□ -1
TRAF4-203ENST00000394925 SMIM6P0DI80 62 aa8.79□□□□□ -1
TRAF4-203ENST00000394925 SPRR2DP22532 72 aa8.78□□□□□ -1
TRAF4-203ENST00000394925 K7EP34 96 aa8.77□□□□□ -1.01
TRAF4-203ENST00000394925 ADM2Q7Z4H4 148 aa8.77□□□□□ -1.01
TRAF4-203ENST00000394925 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
TRAF4-203ENST00000394925 LOC101927531A0A1B0GV80 90 aa8.73□□□□□ -1.01
TRAF4-203ENST00000394925 KRTAP12-2P59991 146 aa8.73□□□□□ -1.01
TRAF4-203ENST00000394925 TRAV22A0A0B4J277 110 aa8.72□□□□□ -1.01
TRAF4-203ENST00000394925 KRTAP4-8A0A0G2JLE6 195 aa8.68□□□□□ -1.02
TRAF4-203ENST00000394925 KRTAP4-8Q9BYQ9 185 aa8.68□□□□□ -1.02
TRAF4-203ENST00000394925 PRO0461Q9UI25 63 aa8.67□□□□□ -1.02
TRAF4-203ENST00000394925 ACYP1P07311 99 aa8.61□□□□□ -1.03
TRAF4-203ENST00000394925 LCE3BQ5TA77 95 aa8.58□□□□□ -1.04
TRAF4-203ENST00000394925 R4GN34 69 aa8.58□□□□□ -1.04
TRAF4-203ENST00000394925 H0Y9P7 68 aa8.53□□□□□ -1.04
TRAF4-203ENST00000394925 ATOX1O00244 68 aa8.5□□□□□ -1.05
TRAF4-203ENST00000394925 UQCRQO14949 82 aa8.5□□□□□ -1.05
TRAF4-203ENST00000394925 P0C880 135 aa8.5□□□□□ -1.05
TRAF4-203ENST00000394925 M0QZ58 72 aa8.49□□□□□ -1.05
TRAF4-203ENST00000394925 KRTAP10-7P60409 375 aaPredicted RBP8.48□□□□□ -1.05
TRAF4-203ENST00000394925 C20orf197Q8N268 126 aa8.44□□□□□ -1.06
TRAF4-203ENST00000394925 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
TRAF4-203ENST00000394925 COL5A1-AS1Q5SY13 56 aa8.43□□□□□ -1.06
TRAF4-203ENST00000394925 ETDBQ3ZM63 59 aa8.42□□□□□ -1.06
TRAF4-203ENST00000394925 KRTAP10-12P60413 245 aa8.41□□□□□ -1.06
TRAF4-203ENST00000394925 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
TRAF4-203ENST00000394925 LINC00208Q96KT6 92 aa8.36□□□□□ -1.07
TRAF4-203ENST00000394925 GPR98Q8WXG9 6306 aa8.36□□□□□ -1.07
TRAF4-203ENST00000394925 F8W1H4 67 aa8.35□□□□□ -1.07
TRAF4-203ENST00000394925 GTF2H5Q6ZYL4 71 aa8.33□□□□□ -1.08
TRAF4-203ENST00000394925 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
TRAF4-203ENST00000394925 LOC105371267A0A1B0GV96 52 aa8.28□□□□□ -1.08
TRAF4-203ENST00000394925 ATP5EP2Q5VTU8 51 aa8.28□□□□□ -1.08
TRAF4-203ENST00000394925 DSTQ03001 7570 aaKnown RBP8.26□□□□□ -1.09
TRAF4-203ENST00000394925 MP68P56378 58 aa8.21□□□□□ -1.1
TRAF4-203ENST00000394925 KRTAP4-9Q9BYQ8 210 aa8.15□□□□□ -1.1
TRAF4-203ENST00000394925 FAM240AA0A1B0GVK7 77 aa8.14□□□□□ -1.11
TRAF4-203ENST00000394925 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
TRAF4-203ENST00000394925 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
TRAF4-203ENST00000394925 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
TRAF4-203ENST00000394925 LINC00643Q86TS7 51 aa8.02□□□□□ -1.13
TRAF4-203ENST00000394925 LCE5AQ5TCM9 118 aa8.01□□□□□ -1.13
TRAF4-203ENST00000394925 H3BPC8 53 aa7.99□□□□□ -1.13
TRAF4-203ENST00000394925 TRAV7A0A075B6U4 112 aa7.94□□□□□ -1.14
TRAF4-203ENST00000394925 KRTAP19-7Q3SYF9 63 aa7.94□□□□□ -1.14
TRAF4-203ENST00000394925 KRTAP19-3Q7Z4W3 81 aa7.93□□□□□ -1.14
TRAF4-203ENST00000394925 MT1EP04732 61 aa7.9□□□□□ -1.14
TRAF4-203ENST00000394925 LCE1DQ5T752 114 aa7.88□□□□□ -1.15
TRAF4-203ENST00000394925 ACYP2P14621 99 aa7.86□□□□□ -1.15
TRAF4-203ENST00000394925 SPTSSBQ8NFR3 76 aa7.86□□□□□ -1.15
TRAF4-203ENST00000394925 PCP4L1A6NKN8 68 aa7.84□□□□□ -1.15
TRAF4-203ENST00000394925 CAMK2N1Q7Z7J9 78 aa7.82□□□□□ -1.16
TRAF4-203ENST00000394925 CYSTM1Q9H1C7 97 aa7.79□□□□□ -1.16
TRAF4-203ENST00000394925 HMCN1Q96RW7 5635 aa7.78□□□□□ -1.16
TRAF4-203ENST00000394925 SCGB1A1P11684 91 aa7.77□□□□□ -1.17
TRAF4-203ENST00000394925 MT4P47944 62 aa7.74□□□□□ -1.17
TRAF4-203ENST00000394925 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
TRAF4-203ENST00000394925 CHKB-CPT1BH3BT56 60 aa7.72□□□□□ -1.17
TRAF4-203ENST00000394925 LCE4AQ5TA78 99 aa7.71□□□□□ -1.18
TRAF4-203ENST00000394925 AHNAK2Q8IVF2 5795 aa7.68□□□□□ -1.18
TRAF4-203ENST00000394925 MT1GP13640 62 aa7.68□□□□□ -1.18
TRAF4-203ENST00000394925 KRTAP19-5Q3LI72 72 aa7.63□□□□□ -1.19
TRAF4-203ENST00000394925 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
TRAF4-203ENST00000394925 A0A0D9SG42 100 aa7.6□□□□□ -1.19
TRAF4-203ENST00000394925 MT1MQ8N339 61 aa7.56□□□□□ -1.2
TRAF4-203ENST00000394925 KRTAP5-10Q6L8G5 202 aa7.55□□□□□ -1.2
TRAF4-203ENST00000394925 KRTAP5-4Q6L8H1 288 aa7.47□□□□□ -1.21
TRAF4-203ENST00000394925 MT1LQ93083 61 aa7.46□□□□□ -1.22
TRAF4-203ENST00000394925 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
TRAF4-203ENST00000394925 KRTAP4-3Q9BYR4 195 aa7.43□□□□□ -1.22
TRAF4-203ENST00000394925 J3QR89 54 aa7.42□□□□□ -1.22
TRAF4-203ENST00000394925 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
TRAF4-203ENST00000394925 SMIM20Q8N5G0 67 aa7.39□□□□□ -1.23
TRAF4-203ENST00000394925 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
TRAF4-203ENST00000394925 A0A1B0GV90 55 aa7.35□□□□□ -1.23
TRAF4-203ENST00000394925 SPATA8Q6RVD6 105 aa7.33□□□□□ -1.24
TRAF4-203ENST00000394925 SPANXA2-OT1Q8N9U9 137 aa7.32□□□□□ -1.24
TRAF4-203ENST00000394925 KRTAP5-7Q6L8G8 165 aa7.31□□□□□ -1.24
TRAF4-203ENST00000394925 KRTAP12-1P59990 96 aa7.27□□□□□ -1.25
TRAF4-203ENST00000394925 KRTAP5-3Q6L8H2 238 aa7.27□□□□□ -1.25
TRAF4-203ENST00000394925 SERP1Q9Y6X1 66 aa7.26□□□□□ -1.25
TRAF4-203ENST00000394925 SEC61GP60059 68 aa7.25□□□□□ -1.25
TRAF4-203ENST00000394925 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
TRAF4-203ENST00000394925 LCE3AQ5TA76 89 aa7.2□□□□□ -1.26
TRAF4-203ENST00000394925 A0A1B0GU33 70 aa7.18□□□□□ -1.26
TRAF4-203ENST00000394925 COA5Q86WW8 74 aa7.18□□□□□ -1.26
TRAF4-203ENST00000394925 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
TRAF4-203ENST00000394925 KRTAP20-2Q3LI61 65 aa7.1□□□□□ -1.27
TRAF4-203ENST00000394925 TNP1P09430 55 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms