RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 KRTAP29-1A8MX34 341 aaPredicted RBP3.27□□□□□ -1.89
MATR3-230ENST00000394800 APOBP04114 4563 aaKnown RBP3.26□□□□□ -1.89
MATR3-230ENST00000394800 LCE6AA0A183 80 aa3.25□□□□□ -1.89
MATR3-230ENST00000394800 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
MATR3-230ENST00000394800 RYR3Q15413 4870 aa3.25□□□□□ -1.89
MATR3-230ENST00000394800 MMP24-AS1A0A0U1RRL7 71 aa3.24□□□□□ -1.89
MATR3-230ENST00000394800 KRTAP13-2Q52LG2 175 aa3.24□□□□□ -1.89
MATR3-230ENST00000394800 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
MATR3-230ENST00000394800 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
MATR3-230ENST00000394800 KRTAP1-4P0C5Y4 121 aa3.22□□□□□ -1.89
MATR3-230ENST00000394800 SMR3BP02814 79 aaPredicted RBP3.21□□□□□ -1.9
MATR3-230ENST00000394800 KIAA1109Q2LD37 5005 aa3.21□□□□□ -1.9
MATR3-230ENST00000394800 INE1O15225 51 aa3.19□□□□□ -1.9
MATR3-230ENST00000394800 MYCBP2O75592 4640 aa3.19□□□□□ -1.9
MATR3-230ENST00000394800 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
MATR3-230ENST00000394800 A0A1B0GVY2 172 aa3.18□□□□□ -1.9
MATR3-230ENST00000394800 TPRXLQ17RH7 258 aa3.17□□□□□ -1.9
MATR3-230ENST00000394800 KRTAP10-4P60372 401 aaPredicted RBP3.16□□□□□ -1.9
MATR3-230ENST00000394800 PKHD1L1Q86WI1 4243 aa3.16□□□□□ -1.9
MATR3-230ENST00000394800 HSPG2P98160 4391 aa3.14□□□□□ -1.91
MATR3-230ENST00000394800 COX6B2Q6YFQ2 88 aa3.14□□□□□ -1.91
MATR3-230ENST00000394800 EPPK1P58107 5090 aaKnown RBP3.14□□□□□ -1.91
MATR3-230ENST00000394800 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
MATR3-230ENST00000394800 RYR1P21817 5038 aa3.12□□□□□ -1.91
MATR3-230ENST00000394800 FAT3Q8TDW7 4589 aa3.12□□□□□ -1.91
MATR3-230ENST00000394800 KRTAP17-1Q9BYP8 105 aa3.12□□□□□ -1.91
MATR3-230ENST00000394800 TNXBP22105 4242 aa3.08□□□□□ -1.92
MATR3-230ENST00000394800 ABCA13Q86UQ4 5058 aa3.04□□□□□ -1.92
MATR3-230ENST00000394800 C9orf92A6NGG3 77 aa3.03□□□□□ -1.92
MATR3-230ENST00000394800 LRP2P98164 4655 aa3.03□□□□□ -1.92
MATR3-230ENST00000394800 H0YAA0 97 aa3.03□□□□□ -1.92
MATR3-230ENST00000394800 RPS29P62273 56 aaKnown RBP3.02□□□□□ -1.93
MATR3-230ENST00000394800 Q5VSD8 79 aa3.02□□□□□ -1.93
MATR3-230ENST00000394800 S4R3F8 94 aa3.01□□□□□ -1.93
MATR3-230ENST00000394800 KRTAP10-8P60410 259 aa3□□□□□ -1.93
MATR3-230ENST00000394800 LPAP08519 4548 aa3□□□□□ -1.93
MATR3-230ENST00000394800 MT1HL1P0DM35 61 aa2.97□□□□□ -1.93
MATR3-230ENST00000394800 KRTAP3-1Q9BYR8 98 aa2.97□□□□□ -1.93
MATR3-230ENST00000394800 KRTAP4-5Q9BYR2 181 aa2.96□□□□□ -1.94
MATR3-230ENST00000394800 HERC2O95714 4834 aa2.95□□□□□ -1.94
MATR3-230ENST00000394800 MUC2Q02817 5179 aa2.91□□□□□ -1.94
MATR3-230ENST00000394800 LCE2CQ5TA81 110 aa2.9□□□□□ -1.94
MATR3-230ENST00000394800 XP32Q5T750 250 aa2.9□□□□□ -1.95
MATR3-230ENST00000394800 HERC1Q15751 4861 aa2.88□□□□□ -1.95
MATR3-230ENST00000394800 M0QZ58 72 aa2.88□□□□□ -1.95
MATR3-230ENST00000394800 PCLOQ9Y6V0 5065 aa2.88□□□□□ -1.95
MATR3-230ENST00000394800 LCE2DQ5TA82 110 aaPredicted RBP2.87□□□□□ -1.95
MATR3-230ENST00000394800 BIRC6Q9NR09 4857 aa2.84□□□□□ -1.96
MATR3-230ENST00000394800 M0R2T5 61 aa2.8□□□□□ -1.96
MATR3-230ENST00000394800 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
MATR3-230ENST00000394800 TNP1P09430 55 aa2.79□□□□□ -1.96
MATR3-230ENST00000394800 RNF213Q63HN8 5207 aa2.78□□□□□ -1.96
MATR3-230ENST00000394800 LCE2BO14633 110 aa2.77□□□□□ -1.97
MATR3-230ENST00000394800 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
MATR3-230ENST00000394800 KRTAP4-1Q9BYQ7 146 aa2.76□□□□□ -1.97
MATR3-230ENST00000394800 KRTAP12-1P59990 96 aa2.76□□□□□ -1.97
MATR3-230ENST00000394800 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
MATR3-230ENST00000394800 KRTAP10-6P60371 365 aaPredicted RBP2.75□□□□□ -1.97
MATR3-230ENST00000394800 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
MATR3-230ENST00000394800 HMCN2Q8NDA2 5059 aa2.74□□□□□ -1.97
MATR3-230ENST00000394800 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
MATR3-230ENST00000394800 UBR4Q5T4S7 5183 aa2.72□□□□□ -1.97
MATR3-230ENST00000394800 LCE2AQ5TA79 106 aaPredicted RBP2.7□□□□□ -1.98
MATR3-230ENST00000394800 KRTAP19-2Q3LHN2 52 aa2.69□□□□□ -1.98
MATR3-230ENST00000394800 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.98
MATR3-230ENST00000394800 LORP23490 312 aaPredicted RBP2.63□□□□□ -1.99
MATR3-230ENST00000394800 MT3P25713 68 aa2.55□□□□□ -2
MATR3-230ENST00000394800 MT1HP80294 61 aa2.47□□□□□ -2.01
MATR3-230ENST00000394800 KRTAP19-1Q8IUB9 90 aa2.44□□□□□ -2.02
MATR3-230ENST00000394800 USH2AO75445 5202 aa2.44□□□□□ -2.02
MATR3-230ENST00000394800 MT1FP04733 61 aa2.43□□□□□ -2.02
MATR3-230ENST00000394800 KRTAP9-8Q9BYQ0 159 aa2.43□□□□□ -2.02
MATR3-230ENST00000394800 MT2AP02795 61 aa2.41□□□□□ -2.02
MATR3-230ENST00000394800 SPRR2GQ9BYE4 73 aa2.4□□□□□ -2.03
MATR3-230ENST00000394800 KRTAP10-10P60014 251 aa2.38□□□□□ -2.03
MATR3-230ENST00000394800 MT1BP07438 61 aa2.32□□□□□ -2.04
MATR3-230ENST00000394800 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
MATR3-230ENST00000394800 KRTAP9-3Q9BYQ3 159 aa2.32□□□□□ -2.04
MATR3-230ENST00000394800 KMT2DO14686 5537 aa2.31□□□□□ -2.04
MATR3-230ENST00000394800 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
MATR3-230ENST00000394800 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
MATR3-230ENST00000394800 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
MATR3-230ENST00000394800 MT1XP80297 61 aa2.27□□□□□ -2.05
MATR3-230ENST00000394800 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
MATR3-230ENST00000394800 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
MATR3-230ENST00000394800 KRTAP10-7P60409 375 aaPredicted RBP2.21□□□□□ -2.06
MATR3-230ENST00000394800 SSPOA2VEC9 5147 aa2.21□□□□□ -2.06
MATR3-230ENST00000394800 KRTAP8-1Q8IUC2 63 aa2.16□□□□□ -2.06
MATR3-230ENST00000394800 KRTAP10-12P60413 245 aa2.15□□□□□ -2.07
MATR3-230ENST00000394800 KRTAP4-8A0A0G2JLE6 195 aa2.13□□□□□ -2.07
MATR3-230ENST00000394800 KRTAP4-8Q9BYQ9 185 aa2.13□□□□□ -2.07
MATR3-230ENST00000394800 SPRR5A0A1B0GTR4 108 aa2.1□□□□□ -2.07
MATR3-230ENST00000394800 LCE5AQ5TCM9 118 aa2.09□□□□□ -2.07
MATR3-230ENST00000394800 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
MATR3-230ENST00000394800 FCGBPQ9Y6R7 5405 aaPredicted RBP2.09□□□□□ -2.07
MATR3-230ENST00000394800 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
MATR3-230ENST00000394800 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
MATR3-230ENST00000394800 DSTQ03001 7570 aaKnown RBP2.06□□□□□ -2.08
MATR3-230ENST00000394800 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
MATR3-230ENST00000394800 KRTAP9-4Q9BYQ2 154 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms