RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 LRP1Q07954 4544 aaKnown RBP8.45□□□□□ -1.06
PTBP1-204ENST00000394601 HSPG2P98160 4391 aa8.45□□□□□ -1.06
PTBP1-204ENST00000394601 K7ERS5 55 aa8.43□□□□□ -1.06
PTBP1-204ENST00000394601 P0C880 135 aa8.41□□□□□ -1.06
PTBP1-204ENST00000394601 RYR3Q15413 4870 aa8.37□□□□□ -1.07
PTBP1-204ENST00000394601 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
PTBP1-204ENST00000394601 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
PTBP1-204ENST00000394601 NDUFAF8A1L188 74 aa8.34□□□□□ -1.07
PTBP1-204ENST00000394601 H1FX-AS1Q4G0G2 97 aa8.33□□□□□ -1.08
PTBP1-204ENST00000394601 KRTAP3-1Q9BYR8 98 aa8.3□□□□□ -1.08
PTBP1-204ENST00000394601 RYR1P21817 5038 aa8.28□□□□□ -1.08
PTBP1-204ENST00000394601 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
PTBP1-204ENST00000394601 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
PTBP1-204ENST00000394601 KRTAP17-1Q9BYP8 105 aa8.2□□□□□ -1.1
PTBP1-204ENST00000394601 KRTAP10-8P60410 259 aa8.16□□□□□ -1.1
PTBP1-204ENST00000394601 TPRXLQ17RH7 258 aa8.14□□□□□ -1.11
PTBP1-204ENST00000394601 A0A0A0MQY5 61 aa8.11□□□□□ -1.11
PTBP1-204ENST00000394601 RPL37P61927 97 aaKnown RBP8.09□□□□□ -1.11
PTBP1-204ENST00000394601 KIAA1109Q2LD37 5005 aa8.09□□□□□ -1.12
PTBP1-204ENST00000394601 LPAP08519 4548 aa8.08□□□□□ -1.12
PTBP1-204ENST00000394601 Q5VSD8 79 aa8.04□□□□□ -1.12
PTBP1-204ENST00000394601 EPPK1P58107 5090 aaKnown RBP8.03□□□□□ -1.12
PTBP1-204ENST00000394601 KRTAP13-4Q3LI77 160 aa8.02□□□□□ -1.13
PTBP1-204ENST00000394601 XP32Q5T750 250 aa7.96□□□□□ -1.13
PTBP1-204ENST00000394601 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.13
PTBP1-204ENST00000394601 MT1HL1P0DM35 61 aa7.96□□□□□ -1.14
PTBP1-204ENST00000394601 LRP2P98164 4655 aa7.94□□□□□ -1.14
PTBP1-204ENST00000394601 ABCA13Q86UQ4 5058 aa7.93□□□□□ -1.14
PTBP1-204ENST00000394601 KRTAP10-6P60371 365 aaPredicted RBP7.84□□□□□ -1.15
PTBP1-204ENST00000394601 S4R3F8 94 aa7.84□□□□□ -1.15
PTBP1-204ENST00000394601 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
PTBP1-204ENST00000394601 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
PTBP1-204ENST00000394601 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
PTBP1-204ENST00000394601 BIRC6Q9NR09 4857 aa7.8□□□□□ -1.16
PTBP1-204ENST00000394601 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
PTBP1-204ENST00000394601 KRTAP4-5Q9BYR2 181 aa7.66□□□□□ -1.18
PTBP1-204ENST00000394601 LUZP6Q538Z0 58 aa7.66□□□□□ -1.18
PTBP1-204ENST00000394601 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
PTBP1-204ENST00000394601 HERC2O95714 4834 aa7.59□□□□□ -1.19
PTBP1-204ENST00000394601 M0QZ58 72 aa7.5□□□□□ -1.21
PTBP1-204ENST00000394601 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
PTBP1-204ENST00000394601 KRTAP4-1Q9BYQ7 146 aa7.43□□□□□ -1.22
PTBP1-204ENST00000394601 R4GN34 69 aa7.42□□□□□ -1.22
PTBP1-204ENST00000394601 KRTAP19-2Q3LHN2 52 aa7.38□□□□□ -1.23
PTBP1-204ENST00000394601 MUC2Q02817 5179 aa7.38□□□□□ -1.23
PTBP1-204ENST00000394601 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
PTBP1-204ENST00000394601 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
PTBP1-204ENST00000394601 SEC61BP60468 96 aaKnown RBP7.26□□□□□ -1.25
PTBP1-204ENST00000394601 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
PTBP1-204ENST00000394601 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
PTBP1-204ENST00000394601 HERC1Q15751 4861 aa7.22□□□□□ -1.25
PTBP1-204ENST00000394601 HMCN2Q8NDA2 5059 aa7.18□□□□□ -1.26
PTBP1-204ENST00000394601 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
PTBP1-204ENST00000394601 FAT4Q6V0I7 4981 aa6.99□□□□□ -1.29
PTBP1-204ENST00000394601 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
PTBP1-204ENST00000394601 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
PTBP1-204ENST00000394601 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
PTBP1-204ENST00000394601 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
PTBP1-204ENST00000394601 TNP1P09430 55 aa6.74□□□□□ -1.33
PTBP1-204ENST00000394601 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
PTBP1-204ENST00000394601 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.34
PTBP1-204ENST00000394601 MT1HP80294 61 aa6.65□□□□□ -1.35
PTBP1-204ENST00000394601 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
PTBP1-204ENST00000394601 MT1FP04733 61 aa6.53□□□□□ -1.36
PTBP1-204ENST00000394601 MT2AP02795 61 aa6.52□□□□□ -1.37
PTBP1-204ENST00000394601 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
PTBP1-204ENST00000394601 LCE2BO14633 110 aa6.45□□□□□ -1.38
PTBP1-204ENST00000394601 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
PTBP1-204ENST00000394601 M0R2T5 61 aa6.41□□□□□ -1.38
PTBP1-204ENST00000394601 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
PTBP1-204ENST00000394601 KRTAP19-8Q3LI54 63 aa6.38□□□□□ -1.39
PTBP1-204ENST00000394601 LCE3AQ5TA76 89 aa6.37□□□□□ -1.39
PTBP1-204ENST00000394601 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
PTBP1-204ENST00000394601 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
PTBP1-204ENST00000394601 MT1BP07438 61 aa6.32□□□□□ -1.4
PTBP1-204ENST00000394601 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
PTBP1-204ENST00000394601 MT1XP80297 61 aa6.26□□□□□ -1.41
PTBP1-204ENST00000394601 KRTAP9-3Q9BYQ3 159 aa6.26□□□□□ -1.41
PTBP1-204ENST00000394601 KRTAP8-1Q8IUC2 63 aa6.12□□□□□ -1.43
PTBP1-204ENST00000394601 INE1O15225 51 aa6.1□□□□□ -1.43
PTBP1-204ENST00000394601 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
PTBP1-204ENST00000394601 USH2AO75445 5202 aa6.04□□□□□ -1.44
PTBP1-204ENST00000394601 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
PTBP1-204ENST00000394601 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
PTBP1-204ENST00000394601 KMT2DO14686 5537 aa5.94□□□□□ -1.46
PTBP1-204ENST00000394601 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
PTBP1-204ENST00000394601 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
PTBP1-204ENST00000394601 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
PTBP1-204ENST00000394601 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
PTBP1-204ENST00000394601 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
PTBP1-204ENST00000394601 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
PTBP1-204ENST00000394601 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
PTBP1-204ENST00000394601 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
PTBP1-204ENST00000394601 KRTAP9-6A0A140TA67 174 aa5.55□□□□□ -1.52
PTBP1-204ENST00000394601 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
PTBP1-204ENST00000394601 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
PTBP1-204ENST00000394601 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
PTBP1-204ENST00000394601 FSIP2Q5CZC0 6907 aa5.46□□□□□ -1.53
PTBP1-204ENST00000394601 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
PTBP1-204ENST00000394601 MT1EP04732 61 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms