RNA–Protein interactions for RNA: ENST00000394576.2

PCDHGA2-201, Transcript of protocadherin gamma subfamily A, 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA2, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2-201ENST00000394576 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
PCDHGA2-201ENST00000394576 PLAC4Q8WY50 150 aa5.73□□□□□ -1.49
PCDHGA2-201ENST00000394576 ALMS1Q8TCU4 4167 aa5.71□□□□□ -1.5
PCDHGA2-201ENST00000394576 VPS13BQ7Z7G8 4022 aa5.67□□□□□ -1.5
PCDHGA2-201ENST00000394576 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
PCDHGA2-201ENST00000394576 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
PCDHGA2-201ENST00000394576 PKD1P98161 4303 aa5.62□□□□□ -1.51
PCDHGA2-201ENST00000394576 FAT1Q14517 4588 aa5.61□□□□□ -1.51
PCDHGA2-201ENST00000394576 MT1HL1P0DM35 61 aa5.59□□□□□ -1.51
PCDHGA2-201ENST00000394576 H0YAA0 97 aa5.59□□□□□ -1.51
PCDHGA2-201ENST00000394576 PKHD1P08F94 4074 aa5.59□□□□□ -1.51
PCDHGA2-201ENST00000394576 DYNC1H1Q14204 4646 aaKnown RBP5.59□□□□□ -1.52
PCDHGA2-201ENST00000394576 SACSQ9NZJ4 4579 aa5.55□□□□□ -1.52
PCDHGA2-201ENST00000394576 TNP1P09430 55 aa5.54□□□□□ -1.52
PCDHGA2-201ENST00000394576 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
PCDHGA2-201ENST00000394576 NDUFAF8A1L188 74 aa5.48□□□□□ -1.53
PCDHGA2-201ENST00000394576 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
PCDHGA2-201ENST00000394576 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
PCDHGA2-201ENST00000394576 P0C880 135 aa5.43□□□□□ -1.54
PCDHGA2-201ENST00000394576 APOBP04114 4563 aaKnown RBP5.42□□□□□ -1.54
PCDHGA2-201ENST00000394576 C10orf95Q9H7T3 257 aa5.42□□□□□ -1.54
PCDHGA2-201ENST00000394576 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
PCDHGA2-201ENST00000394576 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
PCDHGA2-201ENST00000394576 RYR2Q92736 4967 aa5.38□□□□□ -1.55
PCDHGA2-201ENST00000394576 LRP1Q07954 4544 aaKnown RBP5.37□□□□□ -1.55
PCDHGA2-201ENST00000394576 KRTAP17-1Q9BYP8 105 aa5.3□□□□□ -1.56
PCDHGA2-201ENST00000394576 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
PCDHGA2-201ENST00000394576 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
PCDHGA2-201ENST00000394576 PKHD1L1Q86WI1 4243 aa5.24□□□□□ -1.57
PCDHGA2-201ENST00000394576 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
PCDHGA2-201ENST00000394576 RYR3Q15413 4870 aa5.22□□□□□ -1.57
PCDHGA2-201ENST00000394576 HSPG2P98160 4391 aa5.22□□□□□ -1.57
PCDHGA2-201ENST00000394576 KRTAP3-3Q9BYR6 98 aa5.21□□□□□ -1.58
PCDHGA2-201ENST00000394576 KRTAP12-2P59991 146 aa5.21□□□□□ -1.58
PCDHGA2-201ENST00000394576 RYR1P21817 5038 aa5.19□□□□□ -1.58
PCDHGA2-201ENST00000394576 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
PCDHGA2-201ENST00000394576 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
PCDHGA2-201ENST00000394576 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
PCDHGA2-201ENST00000394576 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
PCDHGA2-201ENST00000394576 TNXBP22105 4242 aa5.15□□□□□ -1.58
PCDHGA2-201ENST00000394576 KRTAP3-2Q9BYR7 98 aa5.12□□□□□ -1.59
PCDHGA2-201ENST00000394576 LRP2P98164 4655 aa5.06□□□□□ -1.6
PCDHGA2-201ENST00000394576 EPPK1P58107 5090 aaKnown RBP5.05□□□□□ -1.6
PCDHGA2-201ENST00000394576 LPAP08519 4548 aa5.02□□□□□ -1.61
PCDHGA2-201ENST00000394576 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
PCDHGA2-201ENST00000394576 BIRC6Q9NR09 4857 aa4.92□□□□□ -1.62
PCDHGA2-201ENST00000394576 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
PCDHGA2-201ENST00000394576 LORP23490 312 aaPredicted RBP4.86□□□□□ -1.63
PCDHGA2-201ENST00000394576 HERC2O95714 4834 aa4.84□□□□□ -1.63
PCDHGA2-201ENST00000394576 MT1HP80294 61 aa4.78□□□□□ -1.64
PCDHGA2-201ENST00000394576 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
PCDHGA2-201ENST00000394576 MUC2Q02817 5179 aa4.7□□□□□ -1.66
PCDHGA2-201ENST00000394576 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
PCDHGA2-201ENST00000394576 MUC17Q685J3 4493 aa4.66□□□□□ -1.66
PCDHGA2-201ENST00000394576 MT2AP02795 61 aa4.65□□□□□ -1.67
PCDHGA2-201ENST00000394576 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
PCDHGA2-201ENST00000394576 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
PCDHGA2-201ENST00000394576 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
PCDHGA2-201ENST00000394576 HERC1Q15751 4861 aa4.59□□□□□ -1.67
PCDHGA2-201ENST00000394576 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.68
PCDHGA2-201ENST00000394576 INE1O15225 51 aa4.54□□□□□ -1.68
PCDHGA2-201ENST00000394576 MT1FP04733 61 aa4.54□□□□□ -1.68
PCDHGA2-201ENST00000394576 KRTAP12-3P60328 96 aa4.53□□□□□ -1.68
PCDHGA2-201ENST00000394576 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
PCDHGA2-201ENST00000394576 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
PCDHGA2-201ENST00000394576 FAT4Q6V0I7 4981 aa4.48□□□□□ -1.69
PCDHGA2-201ENST00000394576 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
PCDHGA2-201ENST00000394576 LCE2CQ5TA81 110 aa4.46□□□□□ -1.7
PCDHGA2-201ENST00000394576 HMCN2Q8NDA2 5059 aa4.45□□□□□ -1.7
PCDHGA2-201ENST00000394576 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
PCDHGA2-201ENST00000394576 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
PCDHGA2-201ENST00000394576 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
PCDHGA2-201ENST00000394576 UBR4Q5T4S7 5183 aa4.37□□□□□ -1.71
PCDHGA2-201ENST00000394576 KRTAP19-1Q8IUB9 90 aa4.37□□□□□ -1.71
PCDHGA2-201ENST00000394576 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
PCDHGA2-201ENST00000394576 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
PCDHGA2-201ENST00000394576 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
PCDHGA2-201ENST00000394576 MT1BP07438 61 aa4.21□□□□□ -1.74
PCDHGA2-201ENST00000394576 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
PCDHGA2-201ENST00000394576 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
PCDHGA2-201ENST00000394576 MT1XP80297 61 aa4.12□□□□□ -1.75
PCDHGA2-201ENST00000394576 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
PCDHGA2-201ENST00000394576 LCE2DQ5TA82 110 aaPredicted RBP4.11□□□□□ -1.75
PCDHGA2-201ENST00000394576 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
PCDHGA2-201ENST00000394576 LCE2BO14633 110 aa4.07□□□□□ -1.76
PCDHGA2-201ENST00000394576 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
PCDHGA2-201ENST00000394576 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
PCDHGA2-201ENST00000394576 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
PCDHGA2-201ENST00000394576 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
PCDHGA2-201ENST00000394576 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
PCDHGA2-201ENST00000394576 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
PCDHGA2-201ENST00000394576 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
PCDHGA2-201ENST00000394576 USH2AO75445 5202 aa3.94□□□□□ -1.78
PCDHGA2-201ENST00000394576 SPRR2EP22531 72 aa3.9□□□□□ -1.79
PCDHGA2-201ENST00000394576 SPRR2BP35325 72 aa3.9□□□□□ -1.79
PCDHGA2-201ENST00000394576 SPRR2AP35326 72 aa3.9□□□□□ -1.79
PCDHGA2-201ENST00000394576 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
PCDHGA2-201ENST00000394576 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
PCDHGA2-201ENST00000394576 MT1GP13640 62 aa3.85□□□□□ -1.79
PCDHGA2-201ENST00000394576 KMT2DO14686 5537 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms