RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 TPRXLQ17RH7 258 aa8.46□□□□□ -1.05
EFEMP1-202ENST00000394555 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.05
EFEMP1-202ENST00000394555 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
EFEMP1-202ENST00000394555 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
EFEMP1-202ENST00000394555 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
EFEMP1-202ENST00000394555 KRTAP10-4P60372 401 aaPredicted RBP8.39□□□□□ -1.07
EFEMP1-202ENST00000394555 S4R3F8 94 aa8.37□□□□□ -1.07
EFEMP1-202ENST00000394555 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
EFEMP1-202ENST00000394555 HSPG2P98160 4391 aa8.34□□□□□ -1.07
EFEMP1-202ENST00000394555 MYCBP2O75592 4640 aa8.31□□□□□ -1.08
EFEMP1-202ENST00000394555 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
EFEMP1-202ENST00000394555 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
EFEMP1-202ENST00000394555 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
EFEMP1-202ENST00000394555 NDUFAF8A1L188 74 aa8.24□□□□□ -1.09
EFEMP1-202ENST00000394555 A0A1B0GVY2 172 aa8.21□□□□□ -1.09
EFEMP1-202ENST00000394555 XP32Q5T750 250 aa8.21□□□□□ -1.1
EFEMP1-202ENST00000394555 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
EFEMP1-202ENST00000394555 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
EFEMP1-202ENST00000394555 TNXBP22105 4242 aa8.14□□□□□ -1.11
EFEMP1-202ENST00000394555 LPAP08519 4548 aa8.07□□□□□ -1.12
EFEMP1-202ENST00000394555 KRTAP21-3Q3LHN1 58 aa8.03□□□□□ -1.12
EFEMP1-202ENST00000394555 Q5VSD8 79 aa8.01□□□□□ -1.13
EFEMP1-202ENST00000394555 KMT2CQ8NEZ4 4911 aaKnown RBP8□□□□□ -1.13
EFEMP1-202ENST00000394555 M0QZ58 72 aa7.98□□□□□ -1.13
EFEMP1-202ENST00000394555 RYR2Q92736 4967 aa7.95□□□□□ -1.14
EFEMP1-202ENST00000394555 LRP2P98164 4655 aa7.94□□□□□ -1.14
EFEMP1-202ENST00000394555 R4GN34 69 aa7.84□□□□□ -1.15
EFEMP1-202ENST00000394555 KRTAP17-1Q9BYP8 105 aa7.81□□□□□ -1.16
EFEMP1-202ENST00000394555 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
EFEMP1-202ENST00000394555 RYR1P21817 5038 aa7.73□□□□□ -1.17
EFEMP1-202ENST00000394555 A0A0A0MQY5 61 aa7.73□□□□□ -1.17
EFEMP1-202ENST00000394555 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
EFEMP1-202ENST00000394555 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
EFEMP1-202ENST00000394555 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
EFEMP1-202ENST00000394555 RYR3Q15413 4870 aa7.66□□□□□ -1.18
EFEMP1-202ENST00000394555 ABCA13Q86UQ4 5058 aa7.61□□□□□ -1.19
EFEMP1-202ENST00000394555 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.21
EFEMP1-202ENST00000394555 LUZP6Q538Z0 58 aa7.48□□□□□ -1.21
EFEMP1-202ENST00000394555 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
EFEMP1-202ENST00000394555 SEC61BP60468 96 aaKnown RBP7.42□□□□□ -1.22
EFEMP1-202ENST00000394555 KRTAP4-1Q9BYQ7 146 aa7.41□□□□□ -1.22
EFEMP1-202ENST00000394555 PP632Q6XCG6 107 aa7.4□□□□□ -1.23
EFEMP1-202ENST00000394555 EPPK1P58107 5090 aaKnown RBP7.33□□□□□ -1.24
EFEMP1-202ENST00000394555 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
EFEMP1-202ENST00000394555 MUC2Q02817 5179 aa7.28□□□□□ -1.24
EFEMP1-202ENST00000394555 TNP1P09430 55 aa7.2□□□□□ -1.26
EFEMP1-202ENST00000394555 KRTAP19-2Q3LHN2 52 aa7.2□□□□□ -1.26
EFEMP1-202ENST00000394555 J3QL48 77 aa7.14□□□□□ -1.27
EFEMP1-202ENST00000394555 FLGP20930 4061 aaPredicted RBP7.03□□□□□ -1.28
EFEMP1-202ENST00000394555 PCLOQ9Y6V0 5065 aa7□□□□□ -1.29
EFEMP1-202ENST00000394555 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
EFEMP1-202ENST00000394555 HERC2O95714 4834 aa6.97□□□□□ -1.29
EFEMP1-202ENST00000394555 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.29
EFEMP1-202ENST00000394555 FAT4Q6V0I7 4981 aa6.89□□□□□ -1.31
EFEMP1-202ENST00000394555 HERC1Q15751 4861 aa6.86□□□□□ -1.31
EFEMP1-202ENST00000394555 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
EFEMP1-202ENST00000394555 BIRC6Q9NR09 4857 aa6.8□□□□□ -1.32
EFEMP1-202ENST00000394555 KRTAP19-1Q8IUB9 90 aa6.75□□□□□ -1.33
EFEMP1-202ENST00000394555 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
EFEMP1-202ENST00000394555 M0R2T5 61 aa6.74□□□□□ -1.33
EFEMP1-202ENST00000394555 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
EFEMP1-202ENST00000394555 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
EFEMP1-202ENST00000394555 HMCN2Q8NDA2 5059 aa6.57□□□□□ -1.36
EFEMP1-202ENST00000394555 RNF213Q63HN8 5207 aa6.56□□□□□ -1.36
EFEMP1-202ENST00000394555 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
EFEMP1-202ENST00000394555 MT1FP04733 61 aa6.52□□□□□ -1.36
EFEMP1-202ENST00000394555 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
EFEMP1-202ENST00000394555 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
EFEMP1-202ENST00000394555 MT1HP80294 61 aa6.49□□□□□ -1.37
EFEMP1-202ENST00000394555 MT2AP02795 61 aa6.48□□□□□ -1.37
EFEMP1-202ENST00000394555 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
EFEMP1-202ENST00000394555 INE1O15225 51 aa6.43□□□□□ -1.38
EFEMP1-202ENST00000394555 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
EFEMP1-202ENST00000394555 KRTAP10-12P60413 245 aa6.39□□□□□ -1.39
EFEMP1-202ENST00000394555 MT1XP80297 61 aa6.39□□□□□ -1.39
EFEMP1-202ENST00000394555 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
EFEMP1-202ENST00000394555 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
EFEMP1-202ENST00000394555 MT1BP07438 61 aa6.34□□□□□ -1.39
EFEMP1-202ENST00000394555 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
EFEMP1-202ENST00000394555 KMT2DO14686 5537 aa6.1□□□□□ -1.43
EFEMP1-202ENST00000394555 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.44
EFEMP1-202ENST00000394555 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
EFEMP1-202ENST00000394555 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
EFEMP1-202ENST00000394555 USH2AO75445 5202 aa6.02□□□□□ -1.45
EFEMP1-202ENST00000394555 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
EFEMP1-202ENST00000394555 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
EFEMP1-202ENST00000394555 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
EFEMP1-202ENST00000394555 LCE2BO14633 110 aa5.84□□□□□ -1.47
EFEMP1-202ENST00000394555 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
EFEMP1-202ENST00000394555 KRTAP2-3P0C7H8 128 aa5.72□□□□□ -1.49
EFEMP1-202ENST00000394555 KRTAP2-4Q9BYR9 128 aa5.72□□□□□ -1.49
EFEMP1-202ENST00000394555 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
EFEMP1-202ENST00000394555 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
EFEMP1-202ENST00000394555 MT1LQ93083 61 aa5.54□□□□□ -1.52
EFEMP1-202ENST00000394555 MT1EP04732 61 aa5.48□□□□□ -1.53
EFEMP1-202ENST00000394555 LOC100996750A0A140TA64 210 aa5.42□□□□□ -1.54
EFEMP1-202ENST00000394555 LCE2AQ5TA79 106 aaPredicted RBP5.39□□□□□ -1.55
EFEMP1-202ENST00000394555 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
EFEMP1-202ENST00000394555 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
EFEMP1-202ENST00000394555 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms