RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 H3BS24 57 aa3.95□□□□□ -1.78
SMAD1-202ENST00000394092 FAT1Q14517 4588 aa3.95□□□□□ -1.78
SMAD1-202ENST00000394092 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
SMAD1-202ENST00000394092 C9orf92A6NGG3 77 aa3.94□□□□□ -1.78
SMAD1-202ENST00000394092 A0A1B0GU69 56 aa3.93□□□□□ -1.78
SMAD1-202ENST00000394092 ATP11AUNQ6ZP68 121 aa3.92□□□□□ -1.78
SMAD1-202ENST00000394092 SPTSSBQ8NFR3 76 aa3.92□□□□□ -1.78
SMAD1-202ENST00000394092 Q5VSD8 79 aa3.91□□□□□ -1.78
SMAD1-202ENST00000394092 KMT2CQ8NEZ4 4911 aaKnown RBP3.91□□□□□ -1.78
SMAD1-202ENST00000394092 LCA10Q71F78 164 aa3.9□□□□□ -1.79
SMAD1-202ENST00000394092 FLG2Q5D862 2391 aaPredicted RBP3.89□□□□□ -1.79
SMAD1-202ENST00000394092 SPINK7P58062 85 aa3.88□□□□□ -1.79
SMAD1-202ENST00000394092 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
SMAD1-202ENST00000394092 Q8N1X5 172 aa3.88□□□□□ -1.79
SMAD1-202ENST00000394092 KRTAP10-8P60410 259 aa3.87□□□□□ -1.79
SMAD1-202ENST00000394092 A8MU10 97 aa3.87□□□□□ -1.79
SMAD1-202ENST00000394092 SEC61GP60059 68 aa3.87□□□□□ -1.79
SMAD1-202ENST00000394092 TNXBP22105 4242 aa3.86□□□□□ -1.79
SMAD1-202ENST00000394092 RYR3Q15413 4870 aa3.85□□□□□ -1.79
SMAD1-202ENST00000394092 UQCR11O14957 56 aa3.85□□□□□ -1.79
SMAD1-202ENST00000394092 HSPG2P98160 4391 aa3.85□□□□□ -1.79
SMAD1-202ENST00000394092 RYR1P21817 5038 aa3.84□□□□□ -1.8
SMAD1-202ENST00000394092 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.8
SMAD1-202ENST00000394092 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
SMAD1-202ENST00000394092 COX6B2Q6YFQ2 88 aa3.82□□□□□ -1.8
SMAD1-202ENST00000394092 A6NN06 94 aa3.81□□□□□ -1.8
SMAD1-202ENST00000394092 MIR22HGQ0VDD5 57 aa3.81□□□□□ -1.8
SMAD1-202ENST00000394092 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
SMAD1-202ENST00000394092 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
SMAD1-202ENST00000394092 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
SMAD1-202ENST00000394092 KRTAP3-1Q9BYR8 98 aa3.78□□□□□ -1.8
SMAD1-202ENST00000394092 DMBT1Q9UGM3 2413 aaPredicted RBP3.76□□□□□ -1.81
SMAD1-202ENST00000394092 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
SMAD1-202ENST00000394092 TPRXLQ17RH7 258 aa3.72□□□□□ -1.81
SMAD1-202ENST00000394092 A0A1B0GU33 70 aa3.71□□□□□ -1.81
SMAD1-202ENST00000394092 H1FX-AS1Q4G0G2 97 aa3.71□□□□□ -1.81
SMAD1-202ENST00000394092 EPPK1P58107 5090 aaKnown RBP3.71□□□□□ -1.82
SMAD1-202ENST00000394092 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
SMAD1-202ENST00000394092 S4R3F8 94 aa3.7□□□□□ -1.82
SMAD1-202ENST00000394092 H0YAA0 97 aa3.68□□□□□ -1.82
SMAD1-202ENST00000394092 MYCBP2O75592 4640 aa3.68□□□□□ -1.82
SMAD1-202ENST00000394092 RBM12B-AS1Q9P1G2 102 aa3.66□□□□□ -1.82
SMAD1-202ENST00000394092 K7ERS5 55 aa3.65□□□□□ -1.82
SMAD1-202ENST00000394092 SEC61BP60468 96 aaKnown RBP3.61□□□□□ -1.83
SMAD1-202ENST00000394092 KRTAP10-6P60371 365 aaPredicted RBP3.59□□□□□ -1.83
SMAD1-202ENST00000394092 CSAG1Q6PB30 78 aa3.59□□□□□ -1.84
SMAD1-202ENST00000394092 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
SMAD1-202ENST00000394092 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
SMAD1-202ENST00000394092 LRP2P98164 4655 aa3.57□□□□□ -1.84
SMAD1-202ENST00000394092 ADM2Q7Z4H4 148 aa3.56□□□□□ -1.84
SMAD1-202ENST00000394092 P0C880 135 aa3.52□□□□□ -1.85
SMAD1-202ENST00000394092 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
SMAD1-202ENST00000394092 M0QZ58 72 aa3.52□□□□□ -1.85
SMAD1-202ENST00000394092 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
SMAD1-202ENST00000394092 LPAP08519 4548 aa3.51□□□□□ -1.85
SMAD1-202ENST00000394092 HERC2O95714 4834 aa3.51□□□□□ -1.85
SMAD1-202ENST00000394092 A0A0D9SG42 100 aa3.5□□□□□ -1.85
SMAD1-202ENST00000394092 LINC01554Q52M75 96 aa3.5□□□□□ -1.85
SMAD1-202ENST00000394092 ROMO1P60602 79 aa3.49□□□□□ -1.85
SMAD1-202ENST00000394092 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
SMAD1-202ENST00000394092 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
SMAD1-202ENST00000394092 SPINT4Q6UDR6 99 aa3.43□□□□□ -1.86
SMAD1-202ENST00000394092 R4GN34 69 aa3.43□□□□□ -1.86
SMAD1-202ENST00000394092 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
SMAD1-202ENST00000394092 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
SMAD1-202ENST00000394092 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
SMAD1-202ENST00000394092 PCLOQ9Y6V0 5065 aa3.41□□□□□ -1.86
SMAD1-202ENST00000394092 KRTAP19-2Q3LHN2 52 aa3.36□□□□□ -1.87
SMAD1-202ENST00000394092 CRIPTQ9P021 101 aa3.36□□□□□ -1.87
SMAD1-202ENST00000394092 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
SMAD1-202ENST00000394092 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.87
SMAD1-202ENST00000394092 HERC1Q15751 4861 aa3.33□□□□□ -1.88
SMAD1-202ENST00000394092 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
SMAD1-202ENST00000394092 UBR4Q5T4S7 5183 aa3.3□□□□□ -1.88
SMAD1-202ENST00000394092 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
SMAD1-202ENST00000394092 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
SMAD1-202ENST00000394092 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
SMAD1-202ENST00000394092 CAMK2N1Q7Z7J9 78 aa3.24□□□□□ -1.89
SMAD1-202ENST00000394092 MUC2Q02817 5179 aa3.2□□□□□ -1.9
SMAD1-202ENST00000394092 M0R2T5 61 aa3.18□□□□□ -1.9
SMAD1-202ENST00000394092 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
SMAD1-202ENST00000394092 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
SMAD1-202ENST00000394092 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
SMAD1-202ENST00000394092 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
SMAD1-202ENST00000394092 MT1HP80294 61 aa3.15□□□□□ -1.9
SMAD1-202ENST00000394092 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
SMAD1-202ENST00000394092 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
SMAD1-202ENST00000394092 TNP1P09430 55 aa3.13□□□□□ -1.91
SMAD1-202ENST00000394092 RNF213Q63HN8 5207 aa3.12□□□□□ -1.91
SMAD1-202ENST00000394092 FAT4Q6V0I7 4981 aa3.09□□□□□ -1.92
SMAD1-202ENST00000394092 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
SMAD1-202ENST00000394092 MT2AP02795 61 aa3.08□□□□□ -1.92
SMAD1-202ENST00000394092 MT1FP04733 61 aa3.06□□□□□ -1.92
SMAD1-202ENST00000394092 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
SMAD1-202ENST00000394092 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
SMAD1-202ENST00000394092 MT1BP07438 61 aa2.95□□□□□ -1.94
SMAD1-202ENST00000394092 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
SMAD1-202ENST00000394092 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
SMAD1-202ENST00000394092 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
SMAD1-202ENST00000394092 LCE3AQ5TA76 89 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms