RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 A6NED7 52 aa3.29□□□□□ -1.88
NPM1-203ENST00000393820 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
NPM1-203ENST00000393820 Q6ZRN7 208 aaPredicted RBP3.29□□□□□ -1.88
NPM1-203ENST00000393820 LCA10Q71F78 164 aa3.29□□□□□ -1.88
NPM1-203ENST00000393820 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
NPM1-203ENST00000393820 MYCBP2O75592 4640 aa3.29□□□□□ -1.88
NPM1-203ENST00000393820 MRPL34Q9BQ48 92 aaKnown RBP3.29□□□□□ -1.88
NPM1-203ENST00000393820 PCOTHQ58A44 107 aa3.28□□□□□ -1.88
NPM1-203ENST00000393820 FAT1Q14517 4588 aa3.27□□□□□ -1.89
NPM1-203ENST00000393820 A0A087WTM6 91 aa3.27□□□□□ -1.89
NPM1-203ENST00000393820 A6NN06 94 aa3.27□□□□□ -1.89
NPM1-203ENST00000393820 Q5VSD8 79 aa3.27□□□□□ -1.89
NPM1-203ENST00000393820 CAMK2N1Q7Z7J9 78 aa3.27□□□□□ -1.89
NPM1-203ENST00000393820 FLG2Q5D862 2391 aaPredicted RBP3.26□□□□□ -1.89
NPM1-203ENST00000393820 A8MU10 97 aa3.26□□□□□ -1.89
NPM1-203ENST00000393820 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
NPM1-203ENST00000393820 HRES1P13985 223 aa3.26□□□□□ -1.89
NPM1-203ENST00000393820 SPAG11AQ6PDA7 123 aa3.26□□□□□ -1.89
NPM1-203ENST00000393820 SPTSSBQ8NFR3 76 aa3.26□□□□□ -1.89
NPM1-203ENST00000393820 IGHV6-1A0A0B4J1U7 121 aa3.25□□□□□ -1.89
NPM1-203ENST00000393820 SPACA4Q8TDM5 124 aa3.25□□□□□ -1.89
NPM1-203ENST00000393820 ACYP2P14621 99 aa3.25□□□□□ -1.89
NPM1-203ENST00000393820 KRTAP10-1P60331 282 aa3.24□□□□□ -1.89
NPM1-203ENST00000393820 C8orf87E5RJ46 101 aa3.23□□□□□ -1.89
NPM1-203ENST00000393820 PANO1I0J062 215 aa3.23□□□□□ -1.89
NPM1-203ENST00000393820 ZNF861PO60384 105 aa3.23□□□□□ -1.89
NPM1-203ENST00000393820 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
NPM1-203ENST00000393820 C7orf65Q6ZTY9 151 aa3.23□□□□□ -1.89
NPM1-203ENST00000393820 KRTAP13-3Q3SY46 172 aa3.22□□□□□ -1.89
NPM1-203ENST00000393820 RBM12B-AS1Q9P1G2 102 aa3.22□□□□□ -1.89
NPM1-203ENST00000393820 SSBP3-AS1Q7Z2R9 100 aa3.21□□□□□ -1.89
NPM1-203ENST00000393820 DNAH8Q96JB1 4490 aa3.21□□□□□ -1.9
NPM1-203ENST00000393820 SMR3BP02814 79 aaPredicted RBP3.21□□□□□ -1.9
NPM1-203ENST00000393820 SPINK7P58062 85 aa3.21□□□□□ -1.9
NPM1-203ENST00000393820 Q6ZSA8 131 aa3.21□□□□□ -1.9
NPM1-203ENST00000393820 PSORS1C2Q9UIG4 136 aa3.21□□□□□ -1.9
NPM1-203ENST00000393820 Q5W150 140 aa3.2□□□□□ -1.9
NPM1-203ENST00000393820 DMAC1Q96GE9 116 aa3.2□□□□□ -1.9
NPM1-203ENST00000393820 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
NPM1-203ENST00000393820 LINC00313P59037 77 aa3.17□□□□□ -1.9
NPM1-203ENST00000393820 SPATA8Q6RVD6 105 aa3.17□□□□□ -1.9
NPM1-203ENST00000393820 IGLV7-43P04211 117 aa3.17□□□□□ -1.9
NPM1-203ENST00000393820 A0A1B0GU69 56 aa3.16□□□□□ -1.9
NPM1-203ENST00000393820 SPINK6Q6UWN8 80 aa3.16□□□□□ -1.9
NPM1-203ENST00000393820 ANAPC11Q9NYG5 84 aa3.16□□□□□ -1.9
NPM1-203ENST00000393820 CIRBP-AS1Q8TBR5 109 aa3.15□□□□□ -1.91
NPM1-203ENST00000393820 UQCR11O14957 56 aa3.14□□□□□ -1.91
NPM1-203ENST00000393820 LRP1Q07954 4544 aaKnown RBP3.14□□□□□ -1.91
NPM1-203ENST00000393820 HMCN2Q8NDA2 5059 aa3.14□□□□□ -1.91
NPM1-203ENST00000393820 KRTAP10-4P60372 401 aaPredicted RBP3.13□□□□□ -1.91
NPM1-203ENST00000393820 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
NPM1-203ENST00000393820 FAT3Q8TDW7 4589 aa3.12□□□□□ -1.91
NPM1-203ENST00000393820 PKHD1L1Q86WI1 4243 aa3.12□□□□□ -1.91
NPM1-203ENST00000393820 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
NPM1-203ENST00000393820 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
NPM1-203ENST00000393820 TNXBP22105 4242 aa3.08□□□□□ -1.92
NPM1-203ENST00000393820 KRTAP13-2Q52LG2 175 aa3.07□□□□□ -1.92
NPM1-203ENST00000393820 LINC01554Q52M75 96 aa3.07□□□□□ -1.92
NPM1-203ENST00000393820 RETNLBQ9BQ08 111 aa3.07□□□□□ -1.92
NPM1-203ENST00000393820 MT1HL1P0DM35 61 aa3.06□□□□□ -1.92
NPM1-203ENST00000393820 SPINK1P00995 79 aa3.05□□□□□ -1.92
NPM1-203ENST00000393820 RPS29P62273 56 aaKnown RBP3.04□□□□□ -1.92
NPM1-203ENST00000393820 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
NPM1-203ENST00000393820 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
NPM1-203ENST00000393820 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
NPM1-203ENST00000393820 LRP2P98164 4655 aa3.03□□□□□ -1.92
NPM1-203ENST00000393820 KRTAP1-4P0C5Y4 121 aa3.03□□□□□ -1.92
NPM1-203ENST00000393820 ADM2Q7Z4H4 148 aa3.03□□□□□ -1.92
NPM1-203ENST00000393820 KRTAP10-8P60410 259 aa3.01□□□□□ -1.93
NPM1-203ENST00000393820 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
NPM1-203ENST00000393820 A0A1B0GU33 70 aa2.97□□□□□ -1.93
NPM1-203ENST00000393820 A8MUU9 505 aa2.97□□□□□ -1.93
NPM1-203ENST00000393820 LINC00304Q8N9R0 145 aa2.96□□□□□ -1.94
NPM1-203ENST00000393820 C20orf166-AS1Q96NR2 134 aa2.96□□□□□ -1.94
NPM1-203ENST00000393820 H0YAA0 97 aa2.95□□□□□ -1.94
NPM1-203ENST00000393820 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
NPM1-203ENST00000393820 H1FX-AS1Q4G0G2 97 aa2.95□□□□□ -1.94
NPM1-203ENST00000393820 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
NPM1-203ENST00000393820 MUC2Q02817 5179 aa2.93□□□□□ -1.94
NPM1-203ENST00000393820 K7ERS5 55 aa2.93□□□□□ -1.94
NPM1-203ENST00000393820 COX6B2Q6YFQ2 88 aa2.91□□□□□ -1.94
NPM1-203ENST00000393820 LPAP08519 4548 aa2.9□□□□□ -1.94
NPM1-203ENST00000393820 ROMO1P60602 79 aa2.87□□□□□ -1.95
NPM1-203ENST00000393820 C9orf92A6NGG3 77 aa2.87□□□□□ -1.95
NPM1-203ENST00000393820 RPL37P61927 97 aaKnown RBP2.85□□□□□ -1.95
NPM1-203ENST00000393820 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
NPM1-203ENST00000393820 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
NPM1-203ENST00000393820 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
NPM1-203ENST00000393820 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
NPM1-203ENST00000393820 S4R3F8 94 aa2.78□□□□□ -1.96
NPM1-203ENST00000393820 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
NPM1-203ENST00000393820 CRIPTQ9P021 101 aa2.76□□□□□ -1.97
NPM1-203ENST00000393820 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
NPM1-203ENST00000393820 P0C880 135 aa2.74□□□□□ -1.97
NPM1-203ENST00000393820 A0A0D9SG42 100 aa2.74□□□□□ -1.97
NPM1-203ENST00000393820 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
NPM1-203ENST00000393820 M0QZ58 72 aa2.72□□□□□ -1.97
NPM1-203ENST00000393820 CRCT1Q9UGL9 99 aa2.71□□□□□ -1.98
NPM1-203ENST00000393820 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
NPM1-203ENST00000393820 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms