RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
HMGB3P1-201ENST00000393368 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
HMGB3P1-201ENST00000393368 FAM240AA0A1B0GVK7 77 aa3.68□□□□□ -1.82
HMGB3P1-201ENST00000393368 ACYP1P07311 99 aa3.68□□□□□ -1.82
HMGB3P1-201ENST00000393368 H1FX-AS1Q4G0G2 97 aa3.68□□□□□ -1.82
HMGB3P1-201ENST00000393368 HIST1H4AP62805 103 aaKnown RBP3.67□□□□□ -1.82
HMGB3P1-201ENST00000393368 A0A087WVE0 104 aa3.65□□□□□ -1.83
HMGB3P1-201ENST00000393368 ATP5EP2Q5VTU8 51 aa3.65□□□□□ -1.83
HMGB3P1-201ENST00000393368 TP53AIP1Q9HCN2 124 aa3.65□□□□□ -1.83
HMGB3P1-201ENST00000393368 PRO0628Q9UI54 55 aa3.65□□□□□ -1.83
HMGB3P1-201ENST00000393368 C1orf64Q8NEQ6 169 aa3.62□□□□□ -1.83
HMGB3P1-201ENST00000393368 TRAV22A0A0B4J277 110 aa3.61□□□□□ -1.83
HMGB3P1-201ENST00000393368 LINC00643Q86TS7 51 aa3.61□□□□□ -1.83
HMGB3P1-201ENST00000393368 CYP4F30PQ9H0H9 118 aa3.61□□□□□ -1.83
HMGB3P1-201ENST00000393368 K7ERU9 68 aa3.6□□□□□ -1.83
HMGB3P1-201ENST00000393368 S4R3F8 94 aa3.6□□□□□ -1.83
HMGB3P1-201ENST00000393368 H0Y9P7 68 aa3.59□□□□□ -1.83
HMGB3P1-201ENST00000393368 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
HMGB3P1-201ENST00000393368 LCA10Q71F78 164 aa3.59□□□□□ -1.83
HMGB3P1-201ENST00000393368 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
HMGB3P1-201ENST00000393368 UQCRQO14949 82 aa3.57□□□□□ -1.84
HMGB3P1-201ENST00000393368 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P1-201ENST00000393368 J3QR89 54 aa3.54□□□□□ -1.84
HMGB3P1-201ENST00000393368 OCR1Q9BZK8 76 aa3.54□□□□□ -1.84
HMGB3P1-201ENST00000393368 FAM236AA0A1B0GUQ0 79 aa3.53□□□□□ -1.84
HMGB3P1-201ENST00000393368 FAM236BA0A1B0GV22 79 aa3.53□□□□□ -1.84
HMGB3P1-201ENST00000393368 ATOX1O00244 68 aa3.53□□□□□ -1.84
HMGB3P1-201ENST00000393368 KLKP1Q107X0 134 aa3.53□□□□□ -1.84
HMGB3P1-201ENST00000393368 CSAG1Q6PB30 78 aa3.53□□□□□ -1.84
HMGB3P1-201ENST00000393368 LINC00208Q96KT6 92 aa3.53□□□□□ -1.84
HMGB3P1-201ENST00000393368 MT-ATP8P03928 68 aa3.49□□□□□ -1.85
HMGB3P1-201ENST00000393368 MP68P56378 58 aa3.49□□□□□ -1.85
HMGB3P1-201ENST00000393368 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
HMGB3P1-201ENST00000393368 KRTAP19-6Q3LI70 58 aa3.47□□□□□ -1.85
HMGB3P1-201ENST00000393368 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
HMGB3P1-201ENST00000393368 ANAPC13Q9BS18 74 aa3.45□□□□□ -1.86
HMGB3P1-201ENST00000393368 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
HMGB3P1-201ENST00000393368 NDUFC1O43677 76 aa3.44□□□□□ -1.86
HMGB3P1-201ENST00000393368 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
HMGB3P1-201ENST00000393368 A8MUN3 132 aa3.43□□□□□ -1.86
HMGB3P1-201ENST00000393368 MT1BP07438 61 aa3.43□□□□□ -1.86
HMGB3P1-201ENST00000393368 SPRR2GQ9BYE4 73 aa3.43□□□□□ -1.86
HMGB3P1-201ENST00000393368 H3BPC8 53 aa3.42□□□□□ -1.86
HMGB3P1-201ENST00000393368 IMUPQ9GZP8 106 aa3.41□□□□□ -1.86
HMGB3P1-201ENST00000393368 KRTAP19-8Q3LI54 63 aa3.4□□□□□ -1.87
HMGB3P1-201ENST00000393368 Q5VV11 94 aa3.4□□□□□ -1.87
HMGB3P1-201ENST00000393368 ADM2Q7Z4H4 148 aa3.4□□□□□ -1.87
HMGB3P1-201ENST00000393368 DMAC1Q96GE9 116 aa3.39□□□□□ -1.87
HMGB3P1-201ENST00000393368 TRAV7A0A075B6U4 112 aa3.38□□□□□ -1.87
HMGB3P1-201ENST00000393368 H0YAA0 97 aa3.37□□□□□ -1.87
HMGB3P1-201ENST00000393368 CCDC179H3BU77 68 aa3.37□□□□□ -1.87
HMGB3P1-201ENST00000393368 CRIPTQ9P021 101 aa3.36□□□□□ -1.87
HMGB3P1-201ENST00000393368 SNURFQ9Y675 71 aa3.36□□□□□ -1.87
HMGB3P1-201ENST00000393368 A6NN06 94 aa3.35□□□□□ -1.87
HMGB3P1-201ENST00000393368 SMIM26A0A096LP01 95 aa3.34□□□□□ -1.87
HMGB3P1-201ENST00000393368 P0C880 135 aa3.34□□□□□ -1.87
HMGB3P1-201ENST00000393368 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
HMGB3P1-201ENST00000393368 C20orf197Q8N268 126 aa3.31□□□□□ -1.88
HMGB3P1-201ENST00000393368 ACYP2P14621 99 aa3.3□□□□□ -1.88
HMGB3P1-201ENST00000393368 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
HMGB3P1-201ENST00000393368 SERP2Q8N6R1 65 aa3.29□□□□□ -1.88
HMGB3P1-201ENST00000393368 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
HMGB3P1-201ENST00000393368 M0QZ58 72 aa3.28□□□□□ -1.88
HMGB3P1-201ENST00000393368 PSPHP1O15172 72 aa3.28□□□□□ -1.88
HMGB3P1-201ENST00000393368 R4GN34 69 aa3.28□□□□□ -1.88
HMGB3P1-201ENST00000393368 CHKB-CPT1BH3BT56 60 aa3.27□□□□□ -1.89
HMGB3P1-201ENST00000393368 TMEM258P61165 79 aa3.25□□□□□ -1.89
HMGB3P1-201ENST00000393368 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
HMGB3P1-201ENST00000393368 LINC01554Q52M75 96 aa3.25□□□□□ -1.89
HMGB3P1-201ENST00000393368 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
HMGB3P1-201ENST00000393368 KMT2DO14686 5537 aa3.24□□□□□ -1.89
HMGB3P1-201ENST00000393368 MT1XP80297 61 aa3.23□□□□□ -1.89
HMGB3P1-201ENST00000393368 SPANXA2-OT1Q8N9U9 137 aa3.23□□□□□ -1.89
HMGB3P1-201ENST00000393368 SPTSSBQ8NFR3 76 aa3.23□□□□□ -1.89
HMGB3P1-201ENST00000393368 PLAC4Q8WY50 150 aa3.23□□□□□ -1.89
HMGB3P1-201ENST00000393368 CYSTM1Q9H1C7 97 aa3.22□□□□□ -1.89
HMGB3P1-201ENST00000393368 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
HMGB3P1-201ENST00000393368 NEBP20929 6669 aa3.21□□□□□ -1.9
HMGB3P1-201ENST00000393368 COX7CP15954 63 aa3.2□□□□□ -1.9
HMGB3P1-201ENST00000393368 COA5Q86WW8 74 aa3.19□□□□□ -1.9
HMGB3P1-201ENST00000393368 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
HMGB3P1-201ENST00000393368 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
HMGB3P1-201ENST00000393368 H7BZZ5 65 aa3.16□□□□□ -1.9
HMGB3P1-201ENST00000393368 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
HMGB3P1-201ENST00000393368 LCE1AQ5T7P2 110 aa3.15□□□□□ -1.91
HMGB3P1-201ENST00000393368 SERP1Q9Y6X1 66 aa3.15□□□□□ -1.91
HMGB3P1-201ENST00000393368 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
HMGB3P1-201ENST00000393368 KRTAP10-7P60409 375 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P1-201ENST00000393368 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
HMGB3P1-201ENST00000393368 KRTAP8-1Q8IUC2 63 aa3.09□□□□□ -1.91
HMGB3P1-201ENST00000393368 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
HMGB3P1-201ENST00000393368 A0A0D9SG42 100 aa3.07□□□□□ -1.92
HMGB3P1-201ENST00000393368 SPATA8Q6RVD6 105 aa3.07□□□□□ -1.92
HMGB3P1-201ENST00000393368 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
HMGB3P1-201ENST00000393368 A0A1B0GU33 70 aa3.03□□□□□ -1.92
HMGB3P1-201ENST00000393368 SPRR2EP22531 72 aa3.03□□□□□ -1.92
HMGB3P1-201ENST00000393368 SPRR2BP35325 72 aa3.03□□□□□ -1.92
HMGB3P1-201ENST00000393368 SPRR2AP35326 72 aa3.03□□□□□ -1.92
HMGB3P1-201ENST00000393368 CAMK2N1Q7Z7J9 78 aa3.03□□□□□ -1.92
HMGB3P1-201ENST00000393368 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms