RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 SMR3BP02814 79 aaPredicted RBP6.01□□□□□ -1.45
PDCD4-202ENST00000393104 KRTAP3-3Q9BYR6 98 aa6□□□□□ -1.45
PDCD4-202ENST00000393104 A0A1B0GU33 70 aa5.99□□□□□ -1.45
PDCD4-202ENST00000393104 Q5VSD8 79 aa5.99□□□□□ -1.45
PDCD4-202ENST00000393104 P0C880 135 aa5.98□□□□□ -1.45
PDCD4-202ENST00000393104 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
PDCD4-202ENST00000393104 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
PDCD4-202ENST00000393104 ROMO1P60602 79 aa5.98□□□□□ -1.45
PDCD4-202ENST00000393104 KRTAP10-8P60410 259 aa5.97□□□□□ -1.45
PDCD4-202ENST00000393104 COX6B2Q6YFQ2 88 aa5.96□□□□□ -1.45
PDCD4-202ENST00000393104 CRIPTQ9P021 101 aa5.95□□□□□ -1.46
PDCD4-202ENST00000393104 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
PDCD4-202ENST00000393104 C9orf92A6NGG3 77 aa5.95□□□□□ -1.46
PDCD4-202ENST00000393104 KRTAP17-1Q9BYP8 105 aa5.93□□□□□ -1.46
PDCD4-202ENST00000393104 TPRXLQ17RH7 258 aa5.89□□□□□ -1.47
PDCD4-202ENST00000393104 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
PDCD4-202ENST00000393104 EPPK1P58107 5090 aaKnown RBP5.84□□□□□ -1.48
PDCD4-202ENST00000393104 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
PDCD4-202ENST00000393104 LRP2P98164 4655 aa5.79□□□□□ -1.48
PDCD4-202ENST00000393104 KIAA1109Q2LD37 5005 aa5.76□□□□□ -1.49
PDCD4-202ENST00000393104 HERC2O95714 4834 aa5.75□□□□□ -1.49
PDCD4-202ENST00000393104 C10orf95Q9H7T3 257 aa5.75□□□□□ -1.49
PDCD4-202ENST00000393104 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
PDCD4-202ENST00000393104 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
PDCD4-202ENST00000393104 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
PDCD4-202ENST00000393104 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
PDCD4-202ENST00000393104 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
PDCD4-202ENST00000393104 DMBT1Q9UGM3 2413 aaPredicted RBP5.69□□□□□ -1.5
PDCD4-202ENST00000393104 A0A0D9SG42 100 aa5.67□□□□□ -1.5
PDCD4-202ENST00000393104 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
PDCD4-202ENST00000393104 S4R3F8 94 aa5.63□□□□□ -1.51
PDCD4-202ENST00000393104 MUC17Q685J3 4493 aa5.63□□□□□ -1.51
PDCD4-202ENST00000393104 XP32Q5T750 250 aa5.62□□□□□ -1.51
PDCD4-202ENST00000393104 K7ERS5 55 aa5.57□□□□□ -1.52
PDCD4-202ENST00000393104 J3QL48 77 aa5.51□□□□□ -1.53
PDCD4-202ENST00000393104 NDUFAF8A1L188 74 aa5.5□□□□□ -1.53
PDCD4-202ENST00000393104 SPINT4Q6UDR6 99 aa5.47□□□□□ -1.53
PDCD4-202ENST00000393104 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
PDCD4-202ENST00000393104 SEC61BP60468 96 aaKnown RBP5.4□□□□□ -1.55
PDCD4-202ENST00000393104 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
PDCD4-202ENST00000393104 PCLOQ9Y6V0 5065 aa5.38□□□□□ -1.55
PDCD4-202ENST00000393104 MUC2Q02817 5179 aa5.37□□□□□ -1.55
PDCD4-202ENST00000393104 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
PDCD4-202ENST00000393104 M0QZ58 72 aa5.35□□□□□ -1.55
PDCD4-202ENST00000393104 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
PDCD4-202ENST00000393104 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
PDCD4-202ENST00000393104 KRTAP4-1Q9BYQ7 146 aa5.26□□□□□ -1.57
PDCD4-202ENST00000393104 HERC1Q15751 4861 aa5.25□□□□□ -1.57
PDCD4-202ENST00000393104 PLAC4Q8WY50 150 aa5.17□□□□□ -1.58
PDCD4-202ENST00000393104 R4GN34 69 aa5.11□□□□□ -1.59
PDCD4-202ENST00000393104 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
PDCD4-202ENST00000393104 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
PDCD4-202ENST00000393104 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
PDCD4-202ENST00000393104 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
PDCD4-202ENST00000393104 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
PDCD4-202ENST00000393104 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
PDCD4-202ENST00000393104 MT1HP80294 61 aa4.91□□□□□ -1.62
PDCD4-202ENST00000393104 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
PDCD4-202ENST00000393104 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
PDCD4-202ENST00000393104 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
PDCD4-202ENST00000393104 KRTAP19-1Q8IUB9 90 aa4.79□□□□□ -1.64
PDCD4-202ENST00000393104 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
PDCD4-202ENST00000393104 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
PDCD4-202ENST00000393104 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
PDCD4-202ENST00000393104 MT2AP02795 61 aa4.72□□□□□ -1.65
PDCD4-202ENST00000393104 TNP1P09430 55 aa4.71□□□□□ -1.65
PDCD4-202ENST00000393104 M0R2T5 61 aa4.67□□□□□ -1.66
PDCD4-202ENST00000393104 MT1FP04733 61 aa4.67□□□□□ -1.66
PDCD4-202ENST00000393104 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
PDCD4-202ENST00000393104 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
PDCD4-202ENST00000393104 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
PDCD4-202ENST00000393104 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
PDCD4-202ENST00000393104 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
PDCD4-202ENST00000393104 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
PDCD4-202ENST00000393104 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
PDCD4-202ENST00000393104 MT1XP80297 61 aa4.52□□□□□ -1.69
PDCD4-202ENST00000393104 MT1BP07438 61 aa4.5□□□□□ -1.69
PDCD4-202ENST00000393104 KMT2DO14686 5537 aa4.44□□□□□ -1.7
PDCD4-202ENST00000393104 PRO2289Q9P1D8 64 aa4.42□□□□□ -1.7
PDCD4-202ENST00000393104 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
PDCD4-202ENST00000393104 LCE2BO14633 110 aa4.4□□□□□ -1.71
PDCD4-202ENST00000393104 LCE2DQ5TA82 110 aaPredicted RBP4.37□□□□□ -1.71
PDCD4-202ENST00000393104 USH2AO75445 5202 aa4.37□□□□□ -1.71
PDCD4-202ENST00000393104 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
PDCD4-202ENST00000393104 INE1O15225 51 aa4.3□□□□□ -1.72
PDCD4-202ENST00000393104 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
PDCD4-202ENST00000393104 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
PDCD4-202ENST00000393104 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
PDCD4-202ENST00000393104 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
PDCD4-202ENST00000393104 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
PDCD4-202ENST00000393104 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
PDCD4-202ENST00000393104 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
PDCD4-202ENST00000393104 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
PDCD4-202ENST00000393104 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
PDCD4-202ENST00000393104 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
PDCD4-202ENST00000393104 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
PDCD4-202ENST00000393104 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
PDCD4-202ENST00000393104 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
PDCD4-202ENST00000393104 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
PDCD4-202ENST00000393104 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms