RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 XP32Q5T750 250 aa6.39□□□□□ -1.39
RFC5-201ENST00000392542 ADM2Q7Z4H4 148 aa6.39□□□□□ -1.39
RFC5-201ENST00000392542 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
RFC5-201ENST00000392542 KRTAP17-1Q9BYP8 105 aa6.36□□□□□ -1.39
RFC5-201ENST00000392542 DMBT1Q9UGM3 2413 aaPredicted RBP6.35□□□□□ -1.39
RFC5-201ENST00000392542 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
RFC5-201ENST00000392542 KIAA1109Q2LD37 5005 aa6.31□□□□□ -1.4
RFC5-201ENST00000392542 KRTAP3-3Q9BYR6 98 aa6.3□□□□□ -1.4
RFC5-201ENST00000392542 S4R3F8 94 aa6.26□□□□□ -1.41
RFC5-201ENST00000392542 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
RFC5-201ENST00000392542 CSAG1Q6PB30 78 aa6.22□□□□□ -1.41
RFC5-201ENST00000392542 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
RFC5-201ENST00000392542 K7ERS5 55 aa6.19□□□□□ -1.42
RFC5-201ENST00000392542 EPPK1P58107 5090 aaKnown RBP6.18□□□□□ -1.42
RFC5-201ENST00000392542 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
RFC5-201ENST00000392542 LINC01554Q52M75 96 aa6.17□□□□□ -1.42
RFC5-201ENST00000392542 LRP2P98164 4655 aa6.16□□□□□ -1.42
RFC5-201ENST00000392542 KRTAP13-4Q3LI77 160 aa6.15□□□□□ -1.42
RFC5-201ENST00000392542 LPAP08519 4548 aa6.15□□□□□ -1.43
RFC5-201ENST00000392542 P0C880 135 aa6.11□□□□□ -1.43
RFC5-201ENST00000392542 A0A0D9SG42 100 aa6.08□□□□□ -1.44
RFC5-201ENST00000392542 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
RFC5-201ENST00000392542 ABCA13Q86UQ4 5058 aa6.05□□□□□ -1.44
RFC5-201ENST00000392542 ROMO1P60602 79 aa6.04□□□□□ -1.44
RFC5-201ENST00000392542 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
RFC5-201ENST00000392542 MUC17Q685J3 4493 aa5.98□□□□□ -1.45
RFC5-201ENST00000392542 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
RFC5-201ENST00000392542 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
RFC5-201ENST00000392542 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
RFC5-201ENST00000392542 M0QZ58 72 aa5.94□□□□□ -1.46
RFC5-201ENST00000392542 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
RFC5-201ENST00000392542 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
RFC5-201ENST00000392542 HERC2O95714 4834 aa5.88□□□□□ -1.47
RFC5-201ENST00000392542 J3QL48 77 aa5.88□□□□□ -1.47
RFC5-201ENST00000392542 KRTAP4-1Q9BYQ7 146 aa5.86□□□□□ -1.47
RFC5-201ENST00000392542 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
RFC5-201ENST00000392542 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
RFC5-201ENST00000392542 R4GN34 69 aa5.79□□□□□ -1.48
RFC5-201ENST00000392542 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
RFC5-201ENST00000392542 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
RFC5-201ENST00000392542 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
RFC5-201ENST00000392542 FLGP20930 4061 aaPredicted RBP5.7□□□□□ -1.5
RFC5-201ENST00000392542 HERC1Q15751 4861 aa5.61□□□□□ -1.51
RFC5-201ENST00000392542 HMCN2Q8NDA2 5059 aa5.58□□□□□ -1.52
RFC5-201ENST00000392542 MUC2Q02817 5179 aa5.56□□□□□ -1.52
RFC5-201ENST00000392542 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
RFC5-201ENST00000392542 PCLOQ9Y6V0 5065 aa5.52□□□□□ -1.53
RFC5-201ENST00000392542 H3BS24 57 aa5.49□□□□□ -1.53
RFC5-201ENST00000392542 CAMK2N1Q7Z7J9 78 aa5.49□□□□□ -1.53
RFC5-201ENST00000392542 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
RFC5-201ENST00000392542 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
RFC5-201ENST00000392542 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.56
RFC5-201ENST00000392542 RNF213Q63HN8 5207 aa5.33□□□□□ -1.56
RFC5-201ENST00000392542 NDUFAF8A1L188 74 aa5.33□□□□□ -1.56
RFC5-201ENST00000392542 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
RFC5-201ENST00000392542 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
RFC5-201ENST00000392542 TNP1P09430 55 aa5.29□□□□□ -1.56
RFC5-201ENST00000392542 MT1HP80294 61 aa5.28□□□□□ -1.56
RFC5-201ENST00000392542 M0R2T5 61 aa5.28□□□□□ -1.56
RFC5-201ENST00000392542 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
RFC5-201ENST00000392542 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
RFC5-201ENST00000392542 UBR4Q5T4S7 5183 aa5.22□□□□□ -1.57
RFC5-201ENST00000392542 MT2AP02795 61 aa5.19□□□□□ -1.58
RFC5-201ENST00000392542 MT1FP04733 61 aa5.18□□□□□ -1.58
RFC5-201ENST00000392542 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
RFC5-201ENST00000392542 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
RFC5-201ENST00000392542 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
RFC5-201ENST00000392542 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
RFC5-201ENST00000392542 MT1BP07438 61 aa5.02□□□□□ -1.61
RFC5-201ENST00000392542 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
RFC5-201ENST00000392542 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
RFC5-201ENST00000392542 KRTAP10-5P60370 271 aa4.96□□□□□ -1.61
RFC5-201ENST00000392542 MT1XP80297 61 aa4.96□□□□□ -1.62
RFC5-201ENST00000392542 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
RFC5-201ENST00000392542 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
RFC5-201ENST00000392542 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
RFC5-201ENST00000392542 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
RFC5-201ENST00000392542 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
RFC5-201ENST00000392542 LCE2BO14633 110 aa4.79□□□□□ -1.64
RFC5-201ENST00000392542 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
RFC5-201ENST00000392542 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
RFC5-201ENST00000392542 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.66
RFC5-201ENST00000392542 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
RFC5-201ENST00000392542 USH2AO75445 5202 aa4.58□□□□□ -1.68
RFC5-201ENST00000392542 KMT2DO14686 5537 aa4.51□□□□□ -1.69
RFC5-201ENST00000392542 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
RFC5-201ENST00000392542 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
RFC5-201ENST00000392542 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
RFC5-201ENST00000392542 KRTAP19-7Q3SYF9 63 aa4.42□□□□□ -1.7
RFC5-201ENST00000392542 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
RFC5-201ENST00000392542 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
RFC5-201ENST00000392542 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
RFC5-201ENST00000392542 INE1O15225 51 aa4.34□□□□□ -1.72
RFC5-201ENST00000392542 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
RFC5-201ENST00000392542 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
RFC5-201ENST00000392542 MT1EP04732 61 aa4.31□□□□□ -1.72
RFC5-201ENST00000392542 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
RFC5-201ENST00000392542 MT1LQ93083 61 aa4.29□□□□□ -1.72
RFC5-201ENST00000392542 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
RFC5-201ENST00000392542 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms