RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 LCA10Q71F78 164 aa7.49□□□□□ -1.21
PTPRK-208ENST00000392449 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
PTPRK-208ENST00000392449 A6NN06 94 aa7.45□□□□□ -1.22
PTPRK-208ENST00000392449 CSAG1Q6PB30 78 aa7.45□□□□□ -1.22
PTPRK-208ENST00000392449 K7EP34 96 aa7.43□□□□□ -1.22
PTPRK-208ENST00000392449 Q5VV11 94 aa7.43□□□□□ -1.22
PTPRK-208ENST00000392449 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
PTPRK-208ENST00000392449 KRTAP19-8Q3LI54 63 aa7.42□□□□□ -1.22
PTPRK-208ENST00000392449 NEBP20929 6669 aa7.41□□□□□ -1.22
PTPRK-208ENST00000392449 TP53AIP1Q9HCN2 124 aa7.37□□□□□ -1.23
PTPRK-208ENST00000392449 A0A087WVE0 104 aa7.36□□□□□ -1.23
PTPRK-208ENST00000392449 MUC12Q9UKN1 5478 aa7.36□□□□□ -1.23
PTPRK-208ENST00000392449 GTF2H5Q6ZYL4 71 aa7.36□□□□□ -1.23
PTPRK-208ENST00000392449 KLKP1Q107X0 134 aa7.35□□□□□ -1.23
PTPRK-208ENST00000392449 KRTAP10-5P60370 271 aa7.33□□□□□ -1.24
PTPRK-208ENST00000392449 CYP4F30PQ9H0H9 118 aa7.32□□□□□ -1.24
PTPRK-208ENST00000392449 ETDBQ3ZM63 59 aa7.3□□□□□ -1.24
PTPRK-208ENST00000392449 TRAV22A0A0B4J277 110 aa7.24□□□□□ -1.25
PTPRK-208ENST00000392449 F8W1H4 67 aa7.24□□□□□ -1.25
PTPRK-208ENST00000392449 LOC101927531A0A1B0GV80 90 aa7.2□□□□□ -1.26
PTPRK-208ENST00000392449 IMUPQ9GZP8 106 aa7.18□□□□□ -1.26
PTPRK-208ENST00000392449 K7ERU9 68 aa7.17□□□□□ -1.26
PTPRK-208ENST00000392449 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
PTPRK-208ENST00000392449 KRTAP5-9P26371 169 aa7.17□□□□□ -1.26
PTPRK-208ENST00000392449 KMT2DO14686 5537 aa7.17□□□□□ -1.26
PTPRK-208ENST00000392449 MDN1Q9NU22 5596 aa7.15□□□□□ -1.27
PTPRK-208ENST00000392449 H0Y9P7 68 aa7.12□□□□□ -1.27
PTPRK-208ENST00000392449 HIST1H4AP62805 103 aaKnown RBP7.12□□□□□ -1.27
PTPRK-208ENST00000392449 NDUFC1O43677 76 aa7.11□□□□□ -1.27
PTPRK-208ENST00000392449 KRTAP20-1Q3LI63 56 aa7.11□□□□□ -1.27
PTPRK-208ENST00000392449 UQCRQO14949 82 aa7.1□□□□□ -1.27
PTPRK-208ENST00000392449 J3QR89 54 aa7.09□□□□□ -1.27
PTPRK-208ENST00000392449 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
PTPRK-208ENST00000392449 H0YAA0 97 aa7.07□□□□□ -1.28
PTPRK-208ENST00000392449 ACYP1P07311 99 aa7.07□□□□□ -1.28
PTPRK-208ENST00000392449 ATP5EP2Q5VTU8 51 aa7.06□□□□□ -1.28
PTPRK-208ENST00000392449 ATOX1O00244 68 aa7.05□□□□□ -1.28
PTPRK-208ENST00000392449 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
PTPRK-208ENST00000392449 A8MUN3 132 aa7.01□□□□□ -1.29
PTPRK-208ENST00000392449 LINC00208Q96KT6 92 aa7□□□□□ -1.29
PTPRK-208ENST00000392449 MT1XP80297 61 aa6.99□□□□□ -1.29
PTPRK-208ENST00000392449 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
PTPRK-208ENST00000392449 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
PTPRK-208ENST00000392449 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
PTPRK-208ENST00000392449 P0C880 135 aa6.92□□□□□ -1.3
PTPRK-208ENST00000392449 OCR1Q9BZK8 76 aa6.92□□□□□ -1.3
PTPRK-208ENST00000392449 PLAC4Q8WY50 150 aa6.9□□□□□ -1.31
PTPRK-208ENST00000392449 SPRR2EP22531 72 aa6.89□□□□□ -1.31
PTPRK-208ENST00000392449 SPRR2BP35325 72 aa6.89□□□□□ -1.31
PTPRK-208ENST00000392449 SPRR2AP35326 72 aa6.89□□□□□ -1.31
PTPRK-208ENST00000392449 KRTAP5-3Q6L8H2 238 aa6.89□□□□□ -1.31
PTPRK-208ENST00000392449 SCGB1A1P11684 91 aa6.88□□□□□ -1.31
PTPRK-208ENST00000392449 MP68P56378 58 aa6.88□□□□□ -1.31
PTPRK-208ENST00000392449 R4GN34 69 aa6.87□□□□□ -1.31
PTPRK-208ENST00000392449 PCP4P48539 62 aa6.86□□□□□ -1.31
PTPRK-208ENST00000392449 KRTAP2-3P0C7H8 128 aa6.85□□□□□ -1.31
PTPRK-208ENST00000392449 KRTAP2-4Q9BYR9 128 aa6.85□□□□□ -1.31
PTPRK-208ENST00000392449 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
PTPRK-208ENST00000392449 M0QZ58 72 aa6.84□□□□□ -1.31
PTPRK-208ENST00000392449 MT-ATP8P03928 68 aa6.81□□□□□ -1.32
PTPRK-208ENST00000392449 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
PTPRK-208ENST00000392449 LINC01554Q52M75 96 aa6.79□□□□□ -1.32
PTPRK-208ENST00000392449 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
PTPRK-208ENST00000392449 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
PTPRK-208ENST00000392449 LCE1AQ5T7P2 110 aa6.77□□□□□ -1.33
PTPRK-208ENST00000392449 C20orf197Q8N268 126 aa6.77□□□□□ -1.33
PTPRK-208ENST00000392449 H3BPC8 53 aa6.72□□□□□ -1.33
PTPRK-208ENST00000392449 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
PTPRK-208ENST00000392449 SPRR2DP22532 72 aa6.65□□□□□ -1.35
PTPRK-208ENST00000392449 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.35
PTPRK-208ENST00000392449 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
PTPRK-208ENST00000392449 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
PTPRK-208ENST00000392449 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
PTPRK-208ENST00000392449 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
PTPRK-208ENST00000392449 ANAPC13Q9BS18 74 aa6.6□□□□□ -1.35
PTPRK-208ENST00000392449 ACYP2P14621 99 aa6.55□□□□□ -1.36
PTPRK-208ENST00000392449 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
PTPRK-208ENST00000392449 CCDC179H3BU77 68 aa6.46□□□□□ -1.38
PTPRK-208ENST00000392449 CHKB-CPT1BH3BT56 60 aa6.45□□□□□ -1.38
PTPRK-208ENST00000392449 COX7CP15954 63 aa6.44□□□□□ -1.38
PTPRK-208ENST00000392449 SERP2Q8N6R1 65 aa6.43□□□□□ -1.38
PTPRK-208ENST00000392449 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
PTPRK-208ENST00000392449 SMIM20Q8N5G0 67 aa6.41□□□□□ -1.38
PTPRK-208ENST00000392449 SNURFQ9Y675 71 aa6.41□□□□□ -1.38
PTPRK-208ENST00000392449 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
PTPRK-208ENST00000392449 DSTQ03001 7570 aaKnown RBP6.26□□□□□ -1.41
PTPRK-208ENST00000392449 TMEM258P61165 79 aa6.25□□□□□ -1.41
PTPRK-208ENST00000392449 KRTAP19-7Q3SYF9 63 aa6.25□□□□□ -1.41
PTPRK-208ENST00000392449 SPANXA2-OT1Q8N9U9 137 aa6.25□□□□□ -1.41
PTPRK-208ENST00000392449 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
PTPRK-208ENST00000392449 MT1EP04732 61 aa6.2□□□□□ -1.42
PTPRK-208ENST00000392449 H7BZZ5 65 aa6.19□□□□□ -1.42
PTPRK-208ENST00000392449 A0A0D9SG42 100 aa6.18□□□□□ -1.42
PTPRK-208ENST00000392449 RPS28P62857 69 aaKnown RBP6.16□□□□□ -1.42
PTPRK-208ENST00000392449 KRTAP19-3Q7Z4W3 81 aa6.16□□□□□ -1.42
PTPRK-208ENST00000392449 COA5Q86WW8 74 aa6.15□□□□□ -1.42
PTPRK-208ENST00000392449 SPATA8Q6RVD6 105 aa6.13□□□□□ -1.43
PTPRK-208ENST00000392449 GPR98Q8WXG9 6306 aa6.12□□□□□ -1.43
PTPRK-208ENST00000392449 ATP5EP56381 51 aaPredicted RBP6.12□□□□□ -1.43
PTPRK-208ENST00000392449 SPINT4Q6UDR6 99 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms