RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 MT1BP07438 61 aa9.23□□□□□ -0.93
UBE2E3-201ENST00000392415 KRTAP19-8Q3LI54 63 aa9.23□□□□□ -0.93
UBE2E3-201ENST00000392415 OCR1Q9BZK8 76 aa9.23□□□□□ -0.93
UBE2E3-201ENST00000392415 LINC00208Q96KT6 92 aa9.22□□□□□ -0.93
UBE2E3-201ENST00000392415 SYNE2Q8WXH0 6885 aaKnown RBP9.21□□□□□ -0.94
UBE2E3-201ENST00000392415 Q5VV11 94 aa9.2□□□□□ -0.94
UBE2E3-201ENST00000392415 A8MUN3 132 aa9.18□□□□□ -0.94
UBE2E3-201ENST00000392415 J3QR89 54 aa9.17□□□□□ -0.94
UBE2E3-201ENST00000392415 NDUFC1O43677 76 aa9.17□□□□□ -0.94
UBE2E3-201ENST00000392415 MP68P56378 58 aa9.16□□□□□ -0.94
UBE2E3-201ENST00000392415 IMUPQ9GZP8 106 aa9.16□□□□□ -0.94
UBE2E3-201ENST00000392415 CRIPTQ9P021 101 aa9.14□□□□□ -0.95
UBE2E3-201ENST00000392415 H0YAA0 97 aa9.11□□□□□ -0.95
UBE2E3-201ENST00000392415 A6NN06 94 aa9.09□□□□□ -0.95
UBE2E3-201ENST00000392415 H3BPC8 53 aa9.05□□□□□ -0.96
UBE2E3-201ENST00000392415 KRTAP3-2Q9BYR7 98 aa9.05□□□□□ -0.96
UBE2E3-201ENST00000392415 KRTAP6-3Q3LI67 103 aa9.04□□□□□ -0.96
UBE2E3-201ENST00000392415 SCGB1A1P11684 91 aa9.01□□□□□ -0.97
UBE2E3-201ENST00000392415 KRTAP10-5P60370 271 aa9.01□□□□□ -0.97
UBE2E3-201ENST00000392415 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
UBE2E3-201ENST00000392415 DMAC1Q96GE9 116 aa8.93□□□□□ -0.98
UBE2E3-201ENST00000392415 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
UBE2E3-201ENST00000392415 K7ERU9 68 aa8.83□□□□□ -1
UBE2E3-201ENST00000392415 P0C880 135 aa8.79□□□□□ -1
UBE2E3-201ENST00000392415 SMIM20Q8N5G0 67 aa8.79□□□□□ -1
UBE2E3-201ENST00000392415 TRAV7A0A075B6U4 112 aa8.78□□□□□ -1
UBE2E3-201ENST00000392415 C20orf197Q8N268 126 aa8.78□□□□□ -1
UBE2E3-201ENST00000392415 R4GN34 69 aa8.76□□□□□ -1.01
UBE2E3-201ENST00000392415 ACYP2P14621 99 aa8.72□□□□□ -1.01
UBE2E3-201ENST00000392415 MUC12Q9UKN1 5478 aa8.7□□□□□ -1.02
UBE2E3-201ENST00000392415 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
UBE2E3-201ENST00000392415 M0QZ58 72 aa8.68□□□□□ -1.02
UBE2E3-201ENST00000392415 PRO2289Q9P1D8 64 aa8.67□□□□□ -1.02
UBE2E3-201ENST00000392415 KRTAP5-9P26371 169 aa8.65□□□□□ -1.02
UBE2E3-201ENST00000392415 MT1XP80297 61 aa8.65□□□□□ -1.02
UBE2E3-201ENST00000392415 NEBP20929 6669 aa8.62□□□□□ -1.03
UBE2E3-201ENST00000392415 SPTSSBQ8NFR3 76 aa8.59□□□□□ -1.03
UBE2E3-201ENST00000392415 SNURFQ9Y675 71 aa8.59□□□□□ -1.03
UBE2E3-201ENST00000392415 KMT2DO14686 5537 aa8.55□□□□□ -1.04
UBE2E3-201ENST00000392415 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
UBE2E3-201ENST00000392415 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
UBE2E3-201ENST00000392415 SPANXA2-OT1Q8N9U9 137 aa8.51□□□□□ -1.05
UBE2E3-201ENST00000392415 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
UBE2E3-201ENST00000392415 KRTAP12-2P59991 146 aa8.46□□□□□ -1.06
UBE2E3-201ENST00000392415 MDN1Q9NU22 5596 aa8.46□□□□□ -1.06
UBE2E3-201ENST00000392415 SPRR2FQ96RM1 72 aa8.37□□□□□ -1.07
UBE2E3-201ENST00000392415 KRTAP8-1Q8IUC2 63 aa8.35□□□□□ -1.07
UBE2E3-201ENST00000392415 KRTAP20-1Q3LI63 56 aa8.33□□□□□ -1.08
UBE2E3-201ENST00000392415 KRTAP4-8A0A0G2JLE6 195 aa8.28□□□□□ -1.08
UBE2E3-201ENST00000392415 KRTAP4-8Q9BYQ9 185 aa8.28□□□□□ -1.08
UBE2E3-201ENST00000392415 KRTAP10-7P60409 375 aaPredicted RBP8.26□□□□□ -1.09
UBE2E3-201ENST00000392415 COA5Q86WW8 74 aa8.25□□□□□ -1.09
UBE2E3-201ENST00000392415 SPRR2EP22531 72 aa8.24□□□□□ -1.09
UBE2E3-201ENST00000392415 SPRR2BP35325 72 aa8.24□□□□□ -1.09
UBE2E3-201ENST00000392415 SPRR2AP35326 72 aa8.24□□□□□ -1.09
UBE2E3-201ENST00000392415 KRTAP10-12P60413 245 aa8.24□□□□□ -1.09
UBE2E3-201ENST00000392415 COX7CP15954 63 aa8.23□□□□□ -1.09
UBE2E3-201ENST00000392415 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
UBE2E3-201ENST00000392415 LCE1AQ5T7P2 110 aa8.16□□□□□ -1.1
UBE2E3-201ENST00000392415 KRTAP2-3P0C7H8 128 aa8.14□□□□□ -1.11
UBE2E3-201ENST00000392415 KRTAP2-4Q9BYR9 128 aa8.14□□□□□ -1.11
UBE2E3-201ENST00000392415 H7BZZ5 65 aa8.11□□□□□ -1.11
UBE2E3-201ENST00000392415 CYSTM1Q9H1C7 97 aa8.09□□□□□ -1.11
UBE2E3-201ENST00000392415 SEC61GP60059 68 aa8.08□□□□□ -1.12
UBE2E3-201ENST00000392415 SERP1Q9Y6X1 66 aa8.07□□□□□ -1.12
UBE2E3-201ENST00000392415 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
UBE2E3-201ENST00000392415 A0A1B0GU33 70 aa7.96□□□□□ -1.14
UBE2E3-201ENST00000392415 SPRR2DP22532 72 aa7.96□□□□□ -1.14
UBE2E3-201ENST00000392415 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
UBE2E3-201ENST00000392415 A0A0D9SG42 100 aa7.95□□□□□ -1.14
UBE2E3-201ENST00000392415 ANAPC13Q9BS18 74 aa7.92□□□□□ -1.14
UBE2E3-201ENST00000392415 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
UBE2E3-201ENST00000392415 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
UBE2E3-201ENST00000392415 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.15
UBE2E3-201ENST00000392415 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
UBE2E3-201ENST00000392415 A0A1B0GU69 56 aa7.81□□□□□ -1.16
UBE2E3-201ENST00000392415 CCDC179H3BU77 68 aa7.78□□□□□ -1.16
UBE2E3-201ENST00000392415 LCE3BQ5TA77 95 aa7.76□□□□□ -1.17
UBE2E3-201ENST00000392415 KRTAP19-7Q3SYF9 63 aa7.74□□□□□ -1.17
UBE2E3-201ENST00000392415 SMIM26A0A096LP01 95 aa7.73□□□□□ -1.17
UBE2E3-201ENST00000392415 ATP5EP56381 51 aaPredicted RBP7.69□□□□□ -1.18
UBE2E3-201ENST00000392415 MT1EP04732 61 aa7.67□□□□□ -1.18
UBE2E3-201ENST00000392415 A8MU10 97 aa7.66□□□□□ -1.18
UBE2E3-201ENST00000392415 LCE5AQ5TCM9 118 aa7.62□□□□□ -1.19
UBE2E3-201ENST00000392415 KRTAP19-3Q7Z4W3 81 aa7.6□□□□□ -1.19
UBE2E3-201ENST00000392415 PRR15LQ9BU68 103 aa7.58□□□□□ -1.2
UBE2E3-201ENST00000392415 KRTAP19-5Q3LI72 72 aa7.53□□□□□ -1.2
UBE2E3-201ENST00000392415 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
UBE2E3-201ENST00000392415 TMEM258P61165 79 aa7.49□□□□□ -1.21
UBE2E3-201ENST00000392415 C10orf95Q9H7T3 257 aa7.48□□□□□ -1.21
UBE2E3-201ENST00000392415 DSTQ03001 7570 aaKnown RBP7.47□□□□□ -1.21
UBE2E3-201ENST00000392415 TNP1P09430 55 aa7.45□□□□□ -1.22
UBE2E3-201ENST00000392415 MT1GP13640 62 aa7.44□□□□□ -1.22
UBE2E3-201ENST00000392415 LCE3AQ5TA76 89 aa7.39□□□□□ -1.23
UBE2E3-201ENST00000392415 UQCR11O14957 56 aa7.35□□□□□ -1.23
UBE2E3-201ENST00000392415 PP632Q6XCG6 107 aa7.35□□□□□ -1.23
UBE2E3-201ENST00000392415 MT1LQ93083 61 aa7.33□□□□□ -1.24
UBE2E3-201ENST00000392415 MT1MQ8N339 61 aa7.29□□□□□ -1.24
UBE2E3-201ENST00000392415 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
UBE2E3-201ENST00000392415 MIR22HGQ0VDD5 57 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms