RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 DNAH17Q9UFH2 4485 aa7.98□□□□□ -1.13
SNX9-201ENST00000392185 KIAA1109Q2LD37 5005 aa7.97□□□□□ -1.13
SNX9-201ENST00000392185 RYR1P21817 5038 aa7.96□□□□□ -1.14
SNX9-201ENST00000392185 LYSTQ99698 3801 aa7.92□□□□□ -1.14
SNX9-201ENST00000392185 DNAH2Q9P225 4427 aa7.9□□□□□ -1.14
SNX9-201ENST00000392185 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
SNX9-201ENST00000392185 DNAH8Q96JB1 4490 aa7.86□□□□□ -1.15
SNX9-201ENST00000392185 KRTAP10-6P60371 365 aaPredicted RBP7.86□□□□□ -1.15
SNX9-201ENST00000392185 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
SNX9-201ENST00000392185 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
SNX9-201ENST00000392185 DNAH3Q8TD57 4116 aa7.79□□□□□ -1.16
SNX9-201ENST00000392185 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
SNX9-201ENST00000392185 RYR3Q15413 4870 aa7.77□□□□□ -1.17
SNX9-201ENST00000392185 MYCBP2O75592 4640 aa7.75□□□□□ -1.17
SNX9-201ENST00000392185 CMYA5Q8N3K9 4069 aa7.75□□□□□ -1.17
SNX9-201ENST00000392185 SACSQ9NZJ4 4579 aa7.74□□□□□ -1.17
SNX9-201ENST00000392185 DYNC2H1Q8NCM8 4307 aaKnown RBP7.72□□□□□ -1.17
SNX9-201ENST00000392185 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
SNX9-201ENST00000392185 FAT2Q9NYQ8 4349 aa7.66□□□□□ -1.18
SNX9-201ENST00000392185 H3BS24 57 aa7.66□□□□□ -1.18
SNX9-201ENST00000392185 PP632Q6XCG6 107 aa7.66□□□□□ -1.18
SNX9-201ENST00000392185 VPS13BQ7Z7G8 4022 aa7.65□□□□□ -1.19
SNX9-201ENST00000392185 NDUFAF8A1L188 74 aa7.64□□□□□ -1.19
SNX9-201ENST00000392185 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
SNX9-201ENST00000392185 APOBP04114 4563 aaKnown RBP7.62□□□□□ -1.19
SNX9-201ENST00000392185 DNAH7Q8WXX0 4024 aa7.62□□□□□ -1.19
SNX9-201ENST00000392185 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
SNX9-201ENST00000392185 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
SNX9-201ENST00000392185 FAT3Q8TDW7 4589 aa7.59□□□□□ -1.2
SNX9-201ENST00000392185 DNAH6Q9C0G6 4158 aa7.58□□□□□ -1.2
SNX9-201ENST00000392185 HYDINQ4G0P3 5121 aa7.58□□□□□ -1.2
SNX9-201ENST00000392185 A0A0A0MQY5 61 aa7.54□□□□□ -1.2
SNX9-201ENST00000392185 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.2
SNX9-201ENST00000392185 RYR2Q92736 4967 aa7.49□□□□□ -1.21
SNX9-201ENST00000392185 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
SNX9-201ENST00000392185 KMT2CQ8NEZ4 4911 aaKnown RBP7.44□□□□□ -1.22
SNX9-201ENST00000392185 PKHD1P08F94 4074 aa7.43□□□□□ -1.22
SNX9-201ENST00000392185 FRAS1Q86XX4 4008 aa7.43□□□□□ -1.22
SNX9-201ENST00000392185 HECTD4Q9Y4D8 3996 aa7.41□□□□□ -1.22
SNX9-201ENST00000392185 HERC2O95714 4834 aa7.38□□□□□ -1.23
SNX9-201ENST00000392185 LRP2P98164 4655 aa7.27□□□□□ -1.25
SNX9-201ENST00000392185 HSPG2P98160 4391 aa7.15□□□□□ -1.26
SNX9-201ENST00000392185 MT1HP80294 61 aa7.11□□□□□ -1.27
SNX9-201ENST00000392185 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
SNX9-201ENST00000392185 PKD1P98161 4303 aa7.09□□□□□ -1.27
SNX9-201ENST00000392185 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
SNX9-201ENST00000392185 KRTAP10-12P60413 245 aa7□□□□□ -1.29
SNX9-201ENST00000392185 MT2AP02795 61 aa6.99□□□□□ -1.29
SNX9-201ENST00000392185 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
SNX9-201ENST00000392185 MT1FP04733 61 aa6.92□□□□□ -1.3
SNX9-201ENST00000392185 PCLOQ9Y6V0 5065 aa6.91□□□□□ -1.3
SNX9-201ENST00000392185 LPAP08519 4548 aa6.9□□□□□ -1.3
SNX9-201ENST00000392185 ABCA13Q86UQ4 5058 aa6.9□□□□□ -1.3
SNX9-201ENST00000392185 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
SNX9-201ENST00000392185 SPRR2GQ9BYE4 73 aa6.81□□□□□ -1.32
SNX9-201ENST00000392185 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
SNX9-201ENST00000392185 HERC1Q15751 4861 aa6.8□□□□□ -1.32
SNX9-201ENST00000392185 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
SNX9-201ENST00000392185 LCE2CQ5TA81 110 aa6.65□□□□□ -1.35
SNX9-201ENST00000392185 CRCT1Q9UGL9 99 aa6.64□□□□□ -1.35
SNX9-201ENST00000392185 TNXBP22105 4242 aa6.62□□□□□ -1.35
SNX9-201ENST00000392185 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
SNX9-201ENST00000392185 KRTAP23-1A1A580 65 aa6.6□□□□□ -1.35
SNX9-201ENST00000392185 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
SNX9-201ENST00000392185 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
SNX9-201ENST00000392185 RNF213Q63HN8 5207 aa6.51□□□□□ -1.37
SNX9-201ENST00000392185 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
SNX9-201ENST00000392185 UBR4Q5T4S7 5183 aa6.47□□□□□ -1.37
SNX9-201ENST00000392185 KRTAP19-8Q3LI54 63 aa6.43□□□□□ -1.38
SNX9-201ENST00000392185 MUC2Q02817 5179 aa6.43□□□□□ -1.38
SNX9-201ENST00000392185 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
SNX9-201ENST00000392185 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
SNX9-201ENST00000392185 MT1BP07438 61 aa6.38□□□□□ -1.39
SNX9-201ENST00000392185 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
SNX9-201ENST00000392185 FAT4Q6V0I7 4981 aa6.34□□□□□ -1.4
SNX9-201ENST00000392185 KRTAP9-3Q9BYQ3 159 aa6.32□□□□□ -1.4
SNX9-201ENST00000392185 MT1XP80297 61 aa6.31□□□□□ -1.4
SNX9-201ENST00000392185 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
SNX9-201ENST00000392185 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
SNX9-201ENST00000392185 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
SNX9-201ENST00000392185 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
SNX9-201ENST00000392185 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
SNX9-201ENST00000392185 LCE2BO14633 110 aa6.17□□□□□ -1.42
SNX9-201ENST00000392185 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
SNX9-201ENST00000392185 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
SNX9-201ENST00000392185 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
SNX9-201ENST00000392185 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
SNX9-201ENST00000392185 INE1O15225 51 aa5.92□□□□□ -1.46
SNX9-201ENST00000392185 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
SNX9-201ENST00000392185 SPRR2EP22531 72 aa5.75□□□□□ -1.49
SNX9-201ENST00000392185 SPRR2BP35325 72 aa5.75□□□□□ -1.49
SNX9-201ENST00000392185 SPRR2AP35326 72 aa5.75□□□□□ -1.49
SNX9-201ENST00000392185 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
SNX9-201ENST00000392185 MT1GP13640 62 aa5.71□□□□□ -1.49
SNX9-201ENST00000392185 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
SNX9-201ENST00000392185 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
SNX9-201ENST00000392185 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.5
SNX9-201ENST00000392185 USH2AO75445 5202 aa5.64□□□□□ -1.51
SNX9-201ENST00000392185 MT1EP04732 61 aa5.61□□□□□ -1.51
SNX9-201ENST00000392185 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms