RNA–Protein interactions for RNA: ENST00000389554.7

TBR1-201, Transcript of T-box, brain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBR1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBR1-201ENST00000389554 DNAH3Q8TD57 4116 aa6.47□□□□□ -1.37
TBR1-201ENST00000389554 RPS29P62273 56 aaKnown RBP6.47□□□□□ -1.37
TBR1-201ENST00000389554 PRKDCP78527 4128 aaKnown RBP6.42□□□□□ -1.38
TBR1-201ENST00000389554 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
TBR1-201ENST00000389554 LRP1BQ9NZR2 4599 aa6.41□□□□□ -1.38
TBR1-201ENST00000389554 VPS13DQ5THJ4 4388 aa6.41□□□□□ -1.38
TBR1-201ENST00000389554 DNAH2Q9P225 4427 aa6.4□□□□□ -1.39
TBR1-201ENST00000389554 DNAH6Q9C0G6 4158 aa6.39□□□□□ -1.39
TBR1-201ENST00000389554 HECTD4Q9Y4D8 3996 aa6.39□□□□□ -1.39
TBR1-201ENST00000389554 TNP1P09430 55 aa6.38□□□□□ -1.39
TBR1-201ENST00000389554 ALMS1Q8TCU4 4167 aa6.38□□□□□ -1.39
TBR1-201ENST00000389554 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
TBR1-201ENST00000389554 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
TBR1-201ENST00000389554 A0A1B0GVY2 172 aa6.29□□□□□ -1.4
TBR1-201ENST00000389554 VPS13BQ7Z7G8 4022 aa6.25□□□□□ -1.41
TBR1-201ENST00000389554 FAT1Q14517 4588 aa6.24□□□□□ -1.41
TBR1-201ENST00000389554 DNAH5Q8TE73 4624 aa6.22□□□□□ -1.41
TBR1-201ENST00000389554 DNHD1Q96M86 4753 aa6.18□□□□□ -1.42
TBR1-201ENST00000389554 DYNC2H1Q8NCM8 4307 aaKnown RBP6.17□□□□□ -1.42
TBR1-201ENST00000389554 MYCBP2O75592 4640 aa6.13□□□□□ -1.43
TBR1-201ENST00000389554 HYDINQ4G0P3 5121 aa6.11□□□□□ -1.43
TBR1-201ENST00000389554 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
TBR1-201ENST00000389554 INE1O15225 51 aa6.06□□□□□ -1.44
TBR1-201ENST00000389554 PKHD1P08F94 4074 aa6.06□□□□□ -1.44
TBR1-201ENST00000389554 DYNC1H1Q14204 4646 aaKnown RBP6.03□□□□□ -1.44
TBR1-201ENST00000389554 FAT2Q9NYQ8 4349 aa5.99□□□□□ -1.45
TBR1-201ENST00000389554 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
TBR1-201ENST00000389554 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.46
TBR1-201ENST00000389554 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
TBR1-201ENST00000389554 SACSQ9NZJ4 4579 aa5.94□□□□□ -1.46
TBR1-201ENST00000389554 APOBP04114 4563 aaKnown RBP5.9□□□□□ -1.47
TBR1-201ENST00000389554 PKD1P98161 4303 aa5.88□□□□□ -1.47
TBR1-201ENST00000389554 FAT3Q8TDW7 4589 aa5.87□□□□□ -1.47
TBR1-201ENST00000389554 MT1HL1P0DM35 61 aa5.83□□□□□ -1.48
TBR1-201ENST00000389554 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
TBR1-201ENST00000389554 HSPG2P98160 4391 aa5.76□□□□□ -1.49
TBR1-201ENST00000389554 LRP2P98164 4655 aa5.7□□□□□ -1.5
TBR1-201ENST00000389554 KIAA1109Q2LD37 5005 aa5.69□□□□□ -1.5
TBR1-201ENST00000389554 RYR1P21817 5038 aa5.68□□□□□ -1.5
TBR1-201ENST00000389554 KMT2CQ8NEZ4 4911 aaKnown RBP5.65□□□□□ -1.51
TBR1-201ENST00000389554 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
TBR1-201ENST00000389554 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
TBR1-201ENST00000389554 LPAP08519 4548 aa5.56□□□□□ -1.52
TBR1-201ENST00000389554 RYR3Q15413 4870 aa5.56□□□□□ -1.52
TBR1-201ENST00000389554 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
TBR1-201ENST00000389554 RYR2Q92736 4967 aa5.51□□□□□ -1.53
TBR1-201ENST00000389554 TNXBP22105 4242 aa5.47□□□□□ -1.53
TBR1-201ENST00000389554 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
TBR1-201ENST00000389554 KRTAP4-1Q9BYQ7 146 aa5.43□□□□□ -1.54
TBR1-201ENST00000389554 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
TBR1-201ENST00000389554 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
TBR1-201ENST00000389554 ABCA13Q86UQ4 5058 aa5.31□□□□□ -1.56
TBR1-201ENST00000389554 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
TBR1-201ENST00000389554 MUC2Q02817 5179 aa5.25□□□□□ -1.57
TBR1-201ENST00000389554 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
TBR1-201ENST00000389554 HERC2O95714 4834 aa5.19□□□□□ -1.58
TBR1-201ENST00000389554 PCLOQ9Y6V0 5065 aa5.18□□□□□ -1.58
TBR1-201ENST00000389554 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
TBR1-201ENST00000389554 FAT4Q6V0I7 4981 aa5.02□□□□□ -1.61
TBR1-201ENST00000389554 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
TBR1-201ENST00000389554 MT1HP80294 61 aa5.01□□□□□ -1.61
TBR1-201ENST00000389554 MUC17Q685J3 4493 aa4.98□□□□□ -1.61
TBR1-201ENST00000389554 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
TBR1-201ENST00000389554 BIRC6Q9NR09 4857 aa4.95□□□□□ -1.62
TBR1-201ENST00000389554 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
TBR1-201ENST00000389554 MT2AP02795 61 aa4.92□□□□□ -1.62
TBR1-201ENST00000389554 FSIP2Q5CZC0 6907 aa4.91□□□□□ -1.62
TBR1-201ENST00000389554 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
TBR1-201ENST00000389554 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
TBR1-201ENST00000389554 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
TBR1-201ENST00000389554 HERC1Q15751 4861 aa4.88□□□□□ -1.63
TBR1-201ENST00000389554 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
TBR1-201ENST00000389554 MT1FP04733 61 aa4.85□□□□□ -1.63
TBR1-201ENST00000389554 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
TBR1-201ENST00000389554 UBR4Q5T4S7 5183 aa4.82□□□□□ -1.64
TBR1-201ENST00000389554 HMCN2Q8NDA2 5059 aa4.75□□□□□ -1.65
TBR1-201ENST00000389554 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
TBR1-201ENST00000389554 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
TBR1-201ENST00000389554 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
TBR1-201ENST00000389554 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
TBR1-201ENST00000389554 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
TBR1-201ENST00000389554 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
TBR1-201ENST00000389554 MT1XP80297 61 aa4.63□□□□□ -1.67
TBR1-201ENST00000389554 MT1BP07438 61 aa4.59□□□□□ -1.67
TBR1-201ENST00000389554 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
TBR1-201ENST00000389554 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
TBR1-201ENST00000389554 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
TBR1-201ENST00000389554 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
TBR1-201ENST00000389554 KMT2DO14686 5537 aa4.5□□□□□ -1.69
TBR1-201ENST00000389554 USH2AO75445 5202 aa4.48□□□□□ -1.69
TBR1-201ENST00000389554 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.69
TBR1-201ENST00000389554 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.69
TBR1-201ENST00000389554 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
TBR1-201ENST00000389554 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
TBR1-201ENST00000389554 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
TBR1-201ENST00000389554 SPRR2EP22531 72 aa4.32□□□□□ -1.72
TBR1-201ENST00000389554 SPRR2BP35325 72 aa4.32□□□□□ -1.72
TBR1-201ENST00000389554 SPRR2AP35326 72 aa4.32□□□□□ -1.72
TBR1-201ENST00000389554 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
TBR1-201ENST00000389554 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms