RNA–Protein interactions for RNA: ENST00000385216.1

MIR561-201, microRNA 561, humanhuman

BASIC

Gene MIR561, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR561-201ENST00000385216 NOP10Q9NPE3 64 aaKnown RBP-0.17□□□□□ -2.44
MIR561-201ENST00000385216 KAAG1Q9UBP8 84 aa-0.17□□□□□ -2.44
MIR561-201ENST00000385216 RIF1Q5UIP0 2472 aaKnown RBP-0.18□□□□□ -2.44
MIR561-201ENST00000385216 TLN2Q9Y4G6 2542 aa-0.18□□□□□ -2.44
MIR561-201ENST00000385216 MUC17Q685J3 4493 aa-0.18□□□□□ -2.44
MIR561-201ENST00000385216 CMYA5Q8N3K9 4069 aa-0.18□□□□□ -2.44
MIR561-201ENST00000385216 MGAM2Q2M2H8 2515 aa-0.19□□□□□ -2.44
MIR561-201ENST00000385216 CLTCL1P53675 1640 aa-0.19□□□□□ -2.44
MIR561-201ENST00000385216 C5orf42Q9H799 3197 aa-0.19□□□□□ -2.44
MIR561-201ENST00000385216 CMC2Q9NRP2 79 aa-0.19□□□□□ -2.44
MIR561-201ENST00000385216 HERC1Q15751 4861 aa-0.19□□□□□ -2.44
MIR561-201ENST00000385216 MMP24-AS1A0A0U1RRL7 71 aa-0.2□□□□□ -2.44
MIR561-201ENST00000385216 IQGAP2Q13576 1575 aa-0.2□□□□□ -2.44
MIR561-201ENST00000385216 USH2AO75445 5202 aa-0.2□□□□□ -2.44
MIR561-201ENST00000385216 CCDC168Q8NDH2 2452 aa-0.21□□□□□ -2.44
MIR561-201ENST00000385216 WFDC10BQ8IUB3 73 aa-0.21□□□□□ -2.44
MIR561-201ENST00000385216 ABRACLQ9P1F3 81 aa-0.21□□□□□ -2.44
MIR561-201ENST00000385216 USP9YO00507 2555 aaPredicted RBP-0.21□□□□□ -2.44
MIR561-201ENST00000385216 COL6A5A8TX70 2615 aa-0.21□□□□□ -2.44
MIR561-201ENST00000385216 CHD7Q9P2D1 2997 aa-0.21□□□□□ -2.44
MIR561-201ENST00000385216 DNAH10Q8IVF4 4471 aa-0.22□□□□□ -2.44
MIR561-201ENST00000385216 MGAQ8IWI9 3026 aa-0.22□□□□□ -2.44
MIR561-201ENST00000385216 SMIM27A0A1W2PRY6 76 aa-0.22□□□□□ -2.44
MIR561-201ENST00000385216 M0QY20 66 aa-0.22□□□□□ -2.44
MIR561-201ENST00000385216 TNP1P09430 55 aa-0.22□□□□□ -2.44
MIR561-201ENST00000385216 TFF3Q07654 80 aa-0.22□□□□□ -2.44
MIR561-201ENST00000385216 USP9XQ93008 2570 aaPredicted RBP-0.23□□□□□ -2.45
MIR561-201ENST00000385216 TEX15Q9BXT5 2789 aa-0.23□□□□□ -2.45
MIR561-201ENST00000385216 LINC01546A6NGU7 62 aa-0.23□□□□□ -2.45
MIR561-201ENST00000385216 KRTAP19-8Q3LI54 63 aa-0.23□□□□□ -2.45
MIR561-201ENST00000385216 KRTAP19-5Q3LI72 72 aa-0.23□□□□□ -2.45
MIR561-201ENST00000385216 TRRAPQ9Y4A5 3859 aa-0.23□□□□□ -2.45
MIR561-201ENST00000385216 PLECQ15149 4684 aaKnown RBP-0.24□□□□□ -2.45
MIR561-201ENST00000385216 CRYBG3Q68DQ2 2970 aa-0.24□□□□□ -2.45
MIR561-201ENST00000385216 ZFHX4Q86UP3 3567 aa-0.25□□□□□ -2.45
MIR561-201ENST00000385216 SNRPGP15A8MWD9 76 aa-0.25□□□□□ -2.45
MIR561-201ENST00000385216 CSMD1Q96PZ7 3565 aa-0.25□□□□□ -2.45
MIR561-201ENST00000385216 DSTQ03001 7570 aaKnown RBP-0.26□□□□□ -2.45
MIR561-201ENST00000385216 DYNC1H1Q14204 4646 aaKnown RBP-0.26□□□□□ -2.45
MIR561-201ENST00000385216 ADGRG4Q8IZF6 3080 aa-0.27□□□□□ -2.45
MIR561-201ENST00000385216 A8MTW9 85 aa-0.27□□□□□ -2.45
MIR561-201ENST00000385216 DNAH17Q9UFH2 4485 aa-0.27□□□□□ -2.45
MIR561-201ENST00000385216 TRPM2O94759 1503 aa-0.28□□□□□ -2.45
MIR561-201ENST00000385216 HERC2O95714 4834 aa-0.28□□□□□ -2.45
MIR561-201ENST00000385216 DNHD1Q96M86 4753 aa-0.28□□□□□ -2.45
MIR561-201ENST00000385216 KRTAP8-1Q8IUC2 63 aa-0.28□□□□□ -2.45
MIR561-201ENST00000385216 EPPK1P58107 5090 aaKnown RBP-0.28□□□□□ -2.45
MIR561-201ENST00000385216 LAMA3Q16787 3333 aa-0.29□□□□□ -2.46
MIR561-201ENST00000385216 M0QZ58 72 aa-0.29□□□□□ -2.46
MIR561-201ENST00000385216 SMIM2Q9BVW6 85 aa-0.29□□□□□ -2.46
MIR561-201ENST00000385216 SMR3BP02814 79 aaPredicted RBP-0.3□□□□□ -2.46
MIR561-201ENST00000385216 DEFB131AP59861 70 aa-0.3□□□□□ -2.46
MIR561-201ENST00000385216 CLPSL2Q6UWE3 100 aa-0.3□□□□□ -2.46
MIR561-201ENST00000385216 SRCAPQ6ZRS2 3230 aa-0.3□□□□□ -2.46
MIR561-201ENST00000385216 RYR1P21817 5038 aa-0.3□□□□□ -2.46
MIR561-201ENST00000385216 ATP7AQ04656 1500 aa-0.32□□□□□ -2.46
MIR561-201ENST00000385216 FSIP2Q5CZC0 6907 aa-0.32□□□□□ -2.46
MIR561-201ENST00000385216 DEFB1P60022 68 aa-0.34□□□□□ -2.46
MIR561-201ENST00000385216 SPTAN1Q13813 2472 aaKnown RBP-0.34□□□□□ -2.46
MIR561-201ENST00000385216 SMG1Q96Q15 3661 aaKnown RBP-0.34□□□□□ -2.46
MIR561-201ENST00000385216 DMXL2Q8TDJ6 3036 aa-0.35□□□□□ -2.47
MIR561-201ENST00000385216 NDUFA1O15239 70 aa-0.35□□□□□ -2.47
MIR561-201ENST00000385216 MT1HP80294 61 aa-0.35□□□□□ -2.47
MIR561-201ENST00000385216 LRBAP50851 2863 aa-0.35□□□□□ -2.47
MIR561-201ENST00000385216 POLR2KP53803 58 aaKnown RBP-0.36□□□□□ -2.47
MIR561-201ENST00000385216 BIRC6Q9NR09 4857 aa-0.36□□□□□ -2.47
MIR561-201ENST00000385216 KRTAP20-2Q3LI61 65 aa-0.37□□□□□ -2.47
MIR561-201ENST00000385216 NIPBLQ6KC79 2804 aaeCLIP-0.37□□□□□ -2.47
MIR561-201ENST00000385216 EYSQ5T1H1 3165 aa-0.37□□□□□ -2.47
MIR561-201ENST00000385216 RNF213Q63HN8 5207 aa-0.38□□□□□ -2.47
MIR561-201ENST00000385216 GPR98Q8WXG9 6306 aa-0.38□□□□□ -2.47
MIR561-201ENST00000385216 LAMA2P24043 3122 aaKnown RBP-0.39□□□□□ -2.47
MIR561-201ENST00000385216 MT4P47944 62 aa-0.39□□□□□ -2.47
MIR561-201ENST00000385216 SYNE2Q8WXH0 6885 aaKnown RBP-0.39□□□□□ -2.47
MIR561-201ENST00000385216 SAMD9LQ8IVG5 1584 aa-0.4□□□□□ -2.47
MIR561-201ENST00000385216 TOMM5Q8N4H5 51 aa-0.4□□□□□ -2.47
MIR561-201ENST00000385216 CFAP54Q96N23 3096 aa-0.4□□□□□ -2.47
MIR561-201ENST00000385216 MACF1Q9UPN3 7388 aaKnown RBP-0.4□□□□□ -2.47
MIR561-201ENST00000385216 DNAH5Q8TE73 4624 aa-0.41□□□□□ -2.47
MIR561-201ENST00000385216 VPS13CQ709C8 3753 aa-0.41□□□□□ -2.48
MIR561-201ENST00000385216 CFAP46Q8IYW2 2715 aa-0.42□□□□□ -2.48
MIR561-201ENST00000385216 MYO9AB2RTY4 2548 aa-0.42□□□□□ -2.48
MIR561-201ENST00000385216 SPART-AS1P0CW21 52 aa-0.42□□□□□ -2.48
MIR561-201ENST00000385216 CSMD2Q7Z408 3487 aa-0.42□□□□□ -2.48
MIR561-201ENST00000385216 MT1EP04732 61 aa-0.45□□□□□ -2.48
MIR561-201ENST00000385216 TOP2AP11388 1531 aaKnown RBP-0.45□□□□□ -2.48
MIR561-201ENST00000385216 PRUNE2Q8WUY3 3088 aa-0.46□□□□□ -2.48
MIR561-201ENST00000385216 DOPEY1Q5JWR5 2465 aa-0.46□□□□□ -2.48
MIR561-201ENST00000385216 MT1XP80297 61 aa-0.47□□□□□ -2.48
MIR561-201ENST00000385216 CEP295Q9C0D2 2601 aa-0.47□□□□□ -2.48
MIR561-201ENST00000385216 FRYLO94915 3013 aa-0.47□□□□□ -2.49
MIR561-201ENST00000385216 RYR2Q92736 4967 aa-0.48□□□□□ -2.49
MIR561-201ENST00000385216 HYDINQ4G0P3 5121 aa-0.48□□□□□ -2.49
MIR561-201ENST00000385216 MYO15AQ9UKN7 3530 aa-0.48□□□□□ -2.49
MIR561-201ENST00000385216 ATMQ13315 3056 aa-0.49□□□□□ -2.49
MIR561-201ENST00000385216 LEAP2Q969E1 77 aa-0.49□□□□□ -2.49
MIR561-201ENST00000385216 MROH2BQ7Z745 1585 aa-0.49□□□□□ -2.49
MIR561-201ENST00000385216 KIAA1109Q2LD37 5005 aa-0.5□□□□□ -2.49
MIR561-201ENST00000385216 MT1LQ93083 61 aa-0.5□□□□□ -2.49
MIR561-201ENST00000385216 DUOX1Q9NRD9 1551 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms