RNA–Protein interactions for RNA: ENST00000382043.8

NIN-204, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 4,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-204ENST00000382043 A6NN06 94 aa3.48□□□□□ -1.85
NIN-204ENST00000382043 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
NIN-204ENST00000382043 H0YAA0 97 aa3.48□□□□□ -1.85
NIN-204ENST00000382043 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
NIN-204ENST00000382043 KRTAP3-1Q9BYR8 98 aa3.46□□□□□ -1.86
NIN-204ENST00000382043 KMT2AQ03164 3969 aa3.45□□□□□ -1.86
NIN-204ENST00000382043 KIAA1109Q2LD37 5005 aa3.43□□□□□ -1.86
NIN-204ENST00000382043 DNAH8Q96JB1 4490 aa3.43□□□□□ -1.86
NIN-204ENST00000382043 DYNC1H1Q14204 4646 aaKnown RBP3.43□□□□□ -1.86
NIN-204ENST00000382043 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
NIN-204ENST00000382043 RYR1P21817 5038 aa3.42□□□□□ -1.86
NIN-204ENST00000382043 LRP1BQ9NZR2 4599 aa3.42□□□□□ -1.86
NIN-204ENST00000382043 DNAH2Q9P225 4427 aa3.41□□□□□ -1.86
NIN-204ENST00000382043 DNAH17Q9UFH2 4485 aa3.4□□□□□ -1.86
NIN-204ENST00000382043 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.86
NIN-204ENST00000382043 KRTAP25-1Q3LHN0 102 aa3.4□□□□□ -1.87
NIN-204ENST00000382043 TNP1P09430 55 aa3.39□□□□□ -1.87
NIN-204ENST00000382043 PKHD1P08F94 4074 aa3.38□□□□□ -1.87
NIN-204ENST00000382043 ALMS1Q8TCU4 4167 aa3.38□□□□□ -1.87
NIN-204ENST00000382043 MYCBP2O75592 4640 aa3.36□□□□□ -1.87
NIN-204ENST00000382043 RYR3Q15413 4870 aa3.35□□□□□ -1.87
NIN-204ENST00000382043 VPS13BQ7Z7G8 4022 aa3.31□□□□□ -1.88
NIN-204ENST00000382043 SACSQ9NZJ4 4579 aa3.31□□□□□ -1.88
NIN-204ENST00000382043 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
NIN-204ENST00000382043 FAT2Q9NYQ8 4349 aa3.31□□□□□ -1.88
NIN-204ENST00000382043 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
NIN-204ENST00000382043 PKHD1L1Q86WI1 4243 aa3.3□□□□□ -1.88
NIN-204ENST00000382043 HYDINQ4G0P3 5121 aa3.3□□□□□ -1.88
NIN-204ENST00000382043 PKD1P98161 4303 aa3.3□□□□□ -1.88
NIN-204ENST00000382043 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
NIN-204ENST00000382043 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
NIN-204ENST00000382043 LRP1Q07954 4544 aaKnown RBP3.28□□□□□ -1.88
NIN-204ENST00000382043 LCE2BO14633 110 aa3.27□□□□□ -1.89
NIN-204ENST00000382043 APOBP04114 4563 aaKnown RBP3.27□□□□□ -1.89
NIN-204ENST00000382043 KRTAP12-1P59990 96 aa3.26□□□□□ -1.89
NIN-204ENST00000382043 KMT2CQ8NEZ4 4911 aaKnown RBP3.24□□□□□ -1.89
NIN-204ENST00000382043 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
NIN-204ENST00000382043 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
NIN-204ENST00000382043 KRTAP23-1A1A580 65 aa3.21□□□□□ -1.89
NIN-204ENST00000382043 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
NIN-204ENST00000382043 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
NIN-204ENST00000382043 HERC2O95714 4834 aa3.19□□□□□ -1.9
NIN-204ENST00000382043 RYR2Q92736 4967 aa3.19□□□□□ -1.9
NIN-204ENST00000382043 LCE2CQ5TA81 110 aa3.18□□□□□ -1.9
NIN-204ENST00000382043 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
NIN-204ENST00000382043 LCE2AQ5TA79 106 aaPredicted RBP3.15□□□□□ -1.91
NIN-204ENST00000382043 LRP2P98164 4655 aa3.15□□□□□ -1.91
NIN-204ENST00000382043 LORP23490 312 aaPredicted RBP3.14□□□□□ -1.91
NIN-204ENST00000382043 HSPG2P98160 4391 aa3.06□□□□□ -1.92
NIN-204ENST00000382043 EPPK1P58107 5090 aaKnown RBP3.06□□□□□ -1.92
NIN-204ENST00000382043 PCLOQ9Y6V0 5065 aa3.04□□□□□ -1.92
NIN-204ENST00000382043 TNXBP22105 4242 aa3.04□□□□□ -1.92
NIN-204ENST00000382043 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
NIN-204ENST00000382043 MT1HP80294 61 aa3.01□□□□□ -1.93
NIN-204ENST00000382043 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
NIN-204ENST00000382043 LPAP08519 4548 aa2.98□□□□□ -1.93
NIN-204ENST00000382043 ABCA13Q86UQ4 5058 aa2.97□□□□□ -1.93
NIN-204ENST00000382043 KRTAP10-12P60413 245 aa2.95□□□□□ -1.94
NIN-204ENST00000382043 MT2AP02795 61 aa2.95□□□□□ -1.94
NIN-204ENST00000382043 KRTAP15-1Q3LI76 137 aa2.95□□□□□ -1.94
NIN-204ENST00000382043 MT1FP04733 61 aa2.92□□□□□ -1.94
NIN-204ENST00000382043 HERC1Q15751 4861 aa2.9□□□□□ -1.95
NIN-204ENST00000382043 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
NIN-204ENST00000382043 RNF213Q63HN8 5207 aa2.88□□□□□ -1.95
NIN-204ENST00000382043 FSIP2Q5CZC0 6907 aa2.88□□□□□ -1.95
NIN-204ENST00000382043 KRTAP12-3P60328 96 aa2.87□□□□□ -1.95
NIN-204ENST00000382043 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
NIN-204ENST00000382043 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
NIN-204ENST00000382043 MUC2Q02817 5179 aa2.84□□□□□ -1.95
NIN-204ENST00000382043 KRTAP9-6A0A140TA67 174 aa2.84□□□□□ -1.96
NIN-204ENST00000382043 UBR4Q5T4S7 5183 aa2.82□□□□□ -1.96
NIN-204ENST00000382043 KRTAP19-1Q8IUB9 90 aa2.79□□□□□ -1.96
NIN-204ENST00000382043 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
NIN-204ENST00000382043 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
NIN-204ENST00000382043 KRTAP9-8Q9BYQ0 159 aa2.75□□□□□ -1.97
NIN-204ENST00000382043 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
NIN-204ENST00000382043 KRTAP19-2Q3LHN2 52 aa2.72□□□□□ -1.97
NIN-204ENST00000382043 MUC17Q685J3 4493 aa2.71□□□□□ -1.98
NIN-204ENST00000382043 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
NIN-204ENST00000382043 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
NIN-204ENST00000382043 HMCN2Q8NDA2 5059 aa2.68□□□□□ -1.98
NIN-204ENST00000382043 MT1BP07438 61 aa2.68□□□□□ -1.98
NIN-204ENST00000382043 KRTAP10-7P60409 375 aaPredicted RBP2.68□□□□□ -1.98
NIN-204ENST00000382043 LOC100996750A0A140TA64 210 aa2.67□□□□□ -1.98
NIN-204ENST00000382043 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
NIN-204ENST00000382043 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
NIN-204ENST00000382043 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
NIN-204ENST00000382043 KRTAP9-3Q9BYQ3 159 aa2.66□□□□□ -1.98
NIN-204ENST00000382043 MT1XP80297 61 aa2.65□□□□□ -1.99
NIN-204ENST00000382043 KRTAP9-2Q9BYQ4 174 aa2.64□□□□□ -1.99
NIN-204ENST00000382043 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
NIN-204ENST00000382043 KRTAP4-8A0A0G2JLE6 195 aa2.62□□□□□ -1.99
NIN-204ENST00000382043 KRTAP4-8Q9BYQ9 185 aa2.62□□□□□ -1.99
NIN-204ENST00000382043 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
NIN-204ENST00000382043 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
NIN-204ENST00000382043 LCE3CQ5T5A8 94 aa2.53□□□□□ -2.01
NIN-204ENST00000382043 INE1O15225 51 aa2.51□□□□□ -2.01
NIN-204ENST00000382043 USH2AO75445 5202 aa2.49□□□□□ -2.01
NIN-204ENST00000382043 SPRR2EP22531 72 aa2.46□□□□□ -2.02
NIN-204ENST00000382043 SPRR2BP35325 72 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms