RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
NPC1L1-202ENST00000381160 DNAH5Q8TE73 4624 aa5.82□□□□□ -1.48
NPC1L1-202ENST00000381160 VPS13BQ7Z7G8 4022 aa5.81□□□□□ -1.48
NPC1L1-202ENST00000381160 J3QL48 77 aa5.81□□□□□ -1.48
NPC1L1-202ENST00000381160 S4R3F8 94 aa5.8□□□□□ -1.48
NPC1L1-202ENST00000381160 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
NPC1L1-202ENST00000381160 PKD1P98161 4303 aa5.77□□□□□ -1.49
NPC1L1-202ENST00000381160 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
NPC1L1-202ENST00000381160 RYR2Q92736 4967 aa5.74□□□□□ -1.49
NPC1L1-202ENST00000381160 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
NPC1L1-202ENST00000381160 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
NPC1L1-202ENST00000381160 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
NPC1L1-202ENST00000381160 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
NPC1L1-202ENST00000381160 FAT1Q14517 4588 aa5.65□□□□□ -1.51
NPC1L1-202ENST00000381160 EPPK1P58107 5090 aaKnown RBP5.63□□□□□ -1.51
NPC1L1-202ENST00000381160 DYNC1H1Q14204 4646 aaKnown RBP5.61□□□□□ -1.51
NPC1L1-202ENST00000381160 Q5VSD8 79 aa5.59□□□□□ -1.51
NPC1L1-202ENST00000381160 KRTAP12-1P59990 96 aa5.59□□□□□ -1.52
NPC1L1-202ENST00000381160 XP32Q5T750 250 aa5.56□□□□□ -1.52
NPC1L1-202ENST00000381160 M0QZ58 72 aa5.55□□□□□ -1.52
NPC1L1-202ENST00000381160 APOBP04114 4563 aaKnown RBP5.54□□□□□ -1.52
NPC1L1-202ENST00000381160 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
NPC1L1-202ENST00000381160 MYCBP2O75592 4640 aa5.53□□□□□ -1.52
NPC1L1-202ENST00000381160 R4GN34 69 aa5.51□□□□□ -1.53
NPC1L1-202ENST00000381160 KIAA1109Q2LD37 5005 aa5.51□□□□□ -1.53
NPC1L1-202ENST00000381160 KRTAP10-4P60372 401 aaPredicted RBP5.48□□□□□ -1.53
NPC1L1-202ENST00000381160 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
NPC1L1-202ENST00000381160 HSPG2P98160 4391 aa5.46□□□□□ -1.54
NPC1L1-202ENST00000381160 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
NPC1L1-202ENST00000381160 CAMK2N1Q7Z7J9 78 aa5.36□□□□□ -1.55
NPC1L1-202ENST00000381160 SEC61BP60468 96 aaKnown RBP5.36□□□□□ -1.55
NPC1L1-202ENST00000381160 KRTAP17-1Q9BYP8 105 aa5.36□□□□□ -1.55
NPC1L1-202ENST00000381160 PKHD1L1Q86WI1 4243 aa5.36□□□□□ -1.55
NPC1L1-202ENST00000381160 RYR1P21817 5038 aa5.36□□□□□ -1.55
NPC1L1-202ENST00000381160 FAT3Q8TDW7 4589 aa5.31□□□□□ -1.56
NPC1L1-202ENST00000381160 ABCA13Q86UQ4 5058 aa5.26□□□□□ -1.57
NPC1L1-202ENST00000381160 TNXBP22105 4242 aa5.22□□□□□ -1.57
NPC1L1-202ENST00000381160 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
NPC1L1-202ENST00000381160 LPAP08519 4548 aa5.2□□□□□ -1.58
NPC1L1-202ENST00000381160 PCLOQ9Y6V0 5065 aa5.2□□□□□ -1.58
NPC1L1-202ENST00000381160 LRP2P98164 4655 aa5.19□□□□□ -1.58
NPC1L1-202ENST00000381160 HERC2O95714 4834 aa5.18□□□□□ -1.58
NPC1L1-202ENST00000381160 HERC1Q15751 4861 aa5.14□□□□□ -1.59
NPC1L1-202ENST00000381160 MT1HL1P0DM35 61 aa5.14□□□□□ -1.59
NPC1L1-202ENST00000381160 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
NPC1L1-202ENST00000381160 KRTAP4-5Q9BYR2 181 aa5.13□□□□□ -1.59
NPC1L1-202ENST00000381160 BIRC6Q9NR09 4857 aa5.13□□□□□ -1.59
NPC1L1-202ENST00000381160 TNP1P09430 55 aa5.04□□□□□ -1.6
NPC1L1-202ENST00000381160 M0R2T5 61 aa5.03□□□□□ -1.6
NPC1L1-202ENST00000381160 MUC2Q02817 5179 aa5.03□□□□□ -1.6
NPC1L1-202ENST00000381160 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
NPC1L1-202ENST00000381160 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
NPC1L1-202ENST00000381160 RNF213Q63HN8 5207 aa4.88□□□□□ -1.63
NPC1L1-202ENST00000381160 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
NPC1L1-202ENST00000381160 HMCN2Q8NDA2 5059 aa4.83□□□□□ -1.64
NPC1L1-202ENST00000381160 FAT4Q6V0I7 4981 aa4.77□□□□□ -1.65
NPC1L1-202ENST00000381160 INE1O15225 51 aa4.74□□□□□ -1.65
NPC1L1-202ENST00000381160 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
NPC1L1-202ENST00000381160 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
NPC1L1-202ENST00000381160 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
NPC1L1-202ENST00000381160 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
NPC1L1-202ENST00000381160 KRTAP19-2Q3LHN2 52 aa4.64□□□□□ -1.67
NPC1L1-202ENST00000381160 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
NPC1L1-202ENST00000381160 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
NPC1L1-202ENST00000381160 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
NPC1L1-202ENST00000381160 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
NPC1L1-202ENST00000381160 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
NPC1L1-202ENST00000381160 KRTAP10-12P60413 245 aa4.41□□□□□ -1.7
NPC1L1-202ENST00000381160 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.71
NPC1L1-202ENST00000381160 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
NPC1L1-202ENST00000381160 MT1FP04733 61 aa4.36□□□□□ -1.71
NPC1L1-202ENST00000381160 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
NPC1L1-202ENST00000381160 MT2AP02795 61 aa4.32□□□□□ -1.72
NPC1L1-202ENST00000381160 MT1HP80294 61 aa4.3□□□□□ -1.72
NPC1L1-202ENST00000381160 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
NPC1L1-202ENST00000381160 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
NPC1L1-202ENST00000381160 MT1XP80297 61 aa4.26□□□□□ -1.73
NPC1L1-202ENST00000381160 USH2AO75445 5202 aa4.24□□□□□ -1.73
NPC1L1-202ENST00000381160 MT1BP07438 61 aa4.2□□□□□ -1.74
NPC1L1-202ENST00000381160 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
NPC1L1-202ENST00000381160 LCE2BO14633 110 aa4.19□□□□□ -1.74
NPC1L1-202ENST00000381160 KRTAP19-8Q3LI54 63 aa4.18□□□□□ -1.74
NPC1L1-202ENST00000381160 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
NPC1L1-202ENST00000381160 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
NPC1L1-202ENST00000381160 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.74
NPC1L1-202ENST00000381160 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
NPC1L1-202ENST00000381160 KMT2DO14686 5537 aa4.04□□□□□ -1.76
NPC1L1-202ENST00000381160 KRTAP4-8A0A0G2JLE6 195 aa4□□□□□ -1.77
NPC1L1-202ENST00000381160 KRTAP4-8Q9BYQ9 185 aa4□□□□□ -1.77
NPC1L1-202ENST00000381160 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
NPC1L1-202ENST00000381160 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
NPC1L1-202ENST00000381160 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
NPC1L1-202ENST00000381160 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
NPC1L1-202ENST00000381160 CRCT1Q9UGL9 99 aa3.85□□□□□ -1.79
NPC1L1-202ENST00000381160 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
NPC1L1-202ENST00000381160 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
NPC1L1-202ENST00000381160 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
NPC1L1-202ENST00000381160 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
NPC1L1-202ENST00000381160 MT1LQ93083 61 aa3.71□□□□□ -1.82
NPC1L1-202ENST00000381160 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms