RNA–Protein interactions for RNA: ENST00000380909.8

TRABD-202, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TRABD, Length 2,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-202ENST00000380909 ABCA13Q86UQ4 5058 aa9.44□□□□□ -0.9
TRABD-202ENST00000380909 H0YAA0 97 aa9.43□□□□□ -0.9
TRABD-202ENST00000380909 LINC00304Q8N9R0 145 aa9.42□□□□□ -0.9
TRABD-202ENST00000380909 RPS29P62273 56 aaKnown RBP9.39□□□□□ -0.91
TRABD-202ENST00000380909 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
TRABD-202ENST00000380909 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
TRABD-202ENST00000380909 MT1HL1P0DM35 61 aa9.33□□□□□ -0.92
TRABD-202ENST00000380909 PCLOQ9Y6V0 5065 aa9.3□□□□□ -0.92
TRABD-202ENST00000380909 TNXBP22105 4242 aa9.3□□□□□ -0.92
TRABD-202ENST00000380909 A0A1B0GU33 70 aa9.29□□□□□ -0.92
TRABD-202ENST00000380909 DMBT1Q9UGM3 2413 aaPredicted RBP9.28□□□□□ -0.92
TRABD-202ENST00000380909 H1FX-AS1Q4G0G2 97 aa9.26□□□□□ -0.93
TRABD-202ENST00000380909 J3QL48 77 aa9.2□□□□□ -0.94
TRABD-202ENST00000380909 P0C880 135 aa9.16□□□□□ -0.94
TRABD-202ENST00000380909 K7ERS5 55 aa9.16□□□□□ -0.94
TRABD-202ENST00000380909 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
TRABD-202ENST00000380909 KRTAP3-1Q9BYR8 98 aa9.09□□□□□ -0.95
TRABD-202ENST00000380909 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.96
TRABD-202ENST00000380909 C20orf166-AS1Q96NR2 134 aa9.02□□□□□ -0.96
TRABD-202ENST00000380909 HERC1Q15751 4861 aa8.99□□□□□ -0.97
TRABD-202ENST00000380909 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
TRABD-202ENST00000380909 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
TRABD-202ENST00000380909 TPRXLQ17RH7 258 aa8.88□□□□□ -0.99
TRABD-202ENST00000380909 LCE2DQ5TA82 110 aaPredicted RBP8.87□□□□□ -0.99
TRABD-202ENST00000380909 KRTAP15-1Q3LI76 137 aa8.85□□□□□ -0.99
TRABD-202ENST00000380909 SPINT4Q6UDR6 99 aa8.85□□□□□ -0.99
TRABD-202ENST00000380909 KRTAP3-3Q9BYR6 98 aa8.82□□□□□ -1
TRABD-202ENST00000380909 KRTAP3-2Q9BYR7 98 aa8.82□□□□□ -1
TRABD-202ENST00000380909 LPAP08519 4548 aa8.81□□□□□ -1
TRABD-202ENST00000380909 KRTAP10-6P60371 365 aaPredicted RBP8.81□□□□□ -1
TRABD-202ENST00000380909 HMCN2Q8NDA2 5059 aa8.76□□□□□ -1.01
TRABD-202ENST00000380909 KRTAP13-4Q3LI77 160 aa8.74□□□□□ -1.01
TRABD-202ENST00000380909 NDUFAF8A1L188 74 aa8.71□□□□□ -1.02
TRABD-202ENST00000380909 LRP2P98164 4655 aa8.71□□□□□ -1.02
TRABD-202ENST00000380909 XP32Q5T750 250 aa8.71□□□□□ -1.02
TRABD-202ENST00000380909 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.03
TRABD-202ENST00000380909 A0A0D9SG42 100 aa8.61□□□□□ -1.03
TRABD-202ENST00000380909 S4R3F8 94 aa8.6□□□□□ -1.03
TRABD-202ENST00000380909 A0A0A0MQY5 61 aa8.5□□□□□ -1.05
TRABD-202ENST00000380909 KRTAP12-2P59991 146 aa8.5□□□□□ -1.05
TRABD-202ENST00000380909 UBR4Q5T4S7 5183 aa8.47□□□□□ -1.05
TRABD-202ENST00000380909 SEC61BP60468 96 aaKnown RBP8.47□□□□□ -1.05
TRABD-202ENST00000380909 KRTAP12-1P59990 96 aa8.46□□□□□ -1.05
TRABD-202ENST00000380909 MUC2Q02817 5179 aa8.4□□□□□ -1.07
TRABD-202ENST00000380909 KRTAP4-1Q9BYQ7 146 aa8.39□□□□□ -1.07
TRABD-202ENST00000380909 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
TRABD-202ENST00000380909 RNF213Q63HN8 5207 aa8.33□□□□□ -1.08
TRABD-202ENST00000380909 M0QZ58 72 aa8.32□□□□□ -1.08
TRABD-202ENST00000380909 PLAC4Q8WY50 150 aa8.13□□□□□ -1.11
TRABD-202ENST00000380909 LUZP6Q538Z0 58 aa8.12□□□□□ -1.11
TRABD-202ENST00000380909 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
TRABD-202ENST00000380909 LCE2CQ5TA81 110 aa8.04□□□□□ -1.12
TRABD-202ENST00000380909 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
TRABD-202ENST00000380909 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
TRABD-202ENST00000380909 MT1HP80294 61 aa7.88□□□□□ -1.15
TRABD-202ENST00000380909 FLGP20930 4061 aaPredicted RBP7.86□□□□□ -1.15
TRABD-202ENST00000380909 R4GN34 69 aa7.86□□□□□ -1.15
TRABD-202ENST00000380909 LCE2AQ5TA79 106 aaPredicted RBP7.8□□□□□ -1.16
TRABD-202ENST00000380909 M0R2T5 61 aa7.76□□□□□ -1.17
TRABD-202ENST00000380909 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
TRABD-202ENST00000380909 LCE2BO14633 110 aa7.67□□□□□ -1.18
TRABD-202ENST00000380909 SPRR5A0A1B0GTR4 108 aa7.64□□□□□ -1.19
TRABD-202ENST00000380909 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
TRABD-202ENST00000380909 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
TRABD-202ENST00000380909 CAMK2N1Q7Z7J9 78 aa7.5□□□□□ -1.21
TRABD-202ENST00000380909 MT2AP02795 61 aa7.49□□□□□ -1.21
TRABD-202ENST00000380909 MT1FP04733 61 aa7.45□□□□□ -1.22
TRABD-202ENST00000380909 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
TRABD-202ENST00000380909 TNP1P09430 55 aa7.38□□□□□ -1.23
TRABD-202ENST00000380909 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
TRABD-202ENST00000380909 KRTAP9-3Q9BYQ3 159 aa7.29□□□□□ -1.24
TRABD-202ENST00000380909 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
TRABD-202ENST00000380909 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.25
TRABD-202ENST00000380909 INE1O15225 51 aa7.17□□□□□ -1.26
TRABD-202ENST00000380909 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
TRABD-202ENST00000380909 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
TRABD-202ENST00000380909 KRTAP19-8Q3LI54 63 aa7.03□□□□□ -1.28
TRABD-202ENST00000380909 USH2AO75445 5202 aa7.01□□□□□ -1.29
TRABD-202ENST00000380909 MT1BP07438 61 aa6.98□□□□□ -1.29
TRABD-202ENST00000380909 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
TRABD-202ENST00000380909 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
TRABD-202ENST00000380909 KRTAP8-1Q8IUC2 63 aa6.83□□□□□ -1.32
TRABD-202ENST00000380909 CRCT1Q9UGL9 99 aa6.77□□□□□ -1.33
TRABD-202ENST00000380909 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
TRABD-202ENST00000380909 KRTAP10-5P60370 271 aa6.74□□□□□ -1.33
TRABD-202ENST00000380909 MT1XP80297 61 aa6.74□□□□□ -1.33
TRABD-202ENST00000380909 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
TRABD-202ENST00000380909 FCGBPQ9Y6R7 5405 aaPredicted RBP6.61□□□□□ -1.35
TRABD-202ENST00000380909 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
TRABD-202ENST00000380909 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
TRABD-202ENST00000380909 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
TRABD-202ENST00000380909 KMT2DO14686 5537 aa6.48□□□□□ -1.37
TRABD-202ENST00000380909 MACF1Q9UPN3 7388 aaKnown RBP6.34□□□□□ -1.39
TRABD-202ENST00000380909 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
TRABD-202ENST00000380909 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
TRABD-202ENST00000380909 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
TRABD-202ENST00000380909 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
TRABD-202ENST00000380909 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
TRABD-202ENST00000380909 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
TRABD-202ENST00000380909 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms