RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 KMT2CQ8NEZ4 4911 aaKnown RBP8.41□□□□□ -1.06
VPS16-203ENST00000380469 XP32Q5T750 250 aa8.41□□□□□ -1.06
VPS16-203ENST00000380469 HSPG2P98160 4391 aa8.38□□□□□ -1.07
VPS16-203ENST00000380469 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
VPS16-203ENST00000380469 S4R3F8 94 aa8.35□□□□□ -1.07
VPS16-203ENST00000380469 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
VPS16-203ENST00000380469 KRTAP10-6P60371 365 aaPredicted RBP8.32□□□□□ -1.08
VPS16-203ENST00000380469 KRTAP25-1Q3LHN0 102 aa8.3□□□□□ -1.08
VPS16-203ENST00000380469 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
VPS16-203ENST00000380469 MYCBP2O75592 4640 aa8.23□□□□□ -1.09
VPS16-203ENST00000380469 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
VPS16-203ENST00000380469 RYR1P21817 5038 aa8.22□□□□□ -1.09
VPS16-203ENST00000380469 A0A0D9SG42 100 aa8.21□□□□□ -1.09
VPS16-203ENST00000380469 MT1HL1P0DM35 61 aa8.21□□□□□ -1.09
VPS16-203ENST00000380469 KRTAP17-1Q9BYP8 105 aa8.2□□□□□ -1.1
VPS16-203ENST00000380469 ROMO1P60602 79 aa8.2□□□□□ -1.1
VPS16-203ENST00000380469 P0C880 135 aa8.16□□□□□ -1.1
VPS16-203ENST00000380469 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
VPS16-203ENST00000380469 RYR3Q15413 4870 aa8.12□□□□□ -1.11
VPS16-203ENST00000380469 TPRXLQ17RH7 258 aa8.11□□□□□ -1.11
VPS16-203ENST00000380469 KIAA1109Q2LD37 5005 aa8.04□□□□□ -1.12
VPS16-203ENST00000380469 LPAP08519 4548 aa8□□□□□ -1.13
VPS16-203ENST00000380469 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
VPS16-203ENST00000380469 LRP2P98164 4655 aa7.98□□□□□ -1.13
VPS16-203ENST00000380469 M0QZ58 72 aa7.96□□□□□ -1.13
VPS16-203ENST00000380469 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
VPS16-203ENST00000380469 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
VPS16-203ENST00000380469 C10orf95Q9H7T3 257 aa7.85□□□□□ -1.15
VPS16-203ENST00000380469 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
VPS16-203ENST00000380469 EPPK1P58107 5090 aaKnown RBP7.81□□□□□ -1.16
VPS16-203ENST00000380469 KRTAP4-5Q9BYR2 181 aa7.8□□□□□ -1.16
VPS16-203ENST00000380469 ABCA13Q86UQ4 5058 aa7.77□□□□□ -1.17
VPS16-203ENST00000380469 R4GN34 69 aa7.76□□□□□ -1.17
VPS16-203ENST00000380469 H3BS24 57 aa7.73□□□□□ -1.17
VPS16-203ENST00000380469 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
VPS16-203ENST00000380469 J3QL48 77 aa7.67□□□□□ -1.18
VPS16-203ENST00000380469 KRTAP4-1Q9BYQ7 146 aa7.63□□□□□ -1.19
VPS16-203ENST00000380469 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
VPS16-203ENST00000380469 KRTAP15-1Q3LI76 137 aa7.55□□□□□ -1.2
VPS16-203ENST00000380469 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
VPS16-203ENST00000380469 HERC2O95714 4834 aa7.44□□□□□ -1.22
VPS16-203ENST00000380469 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
VPS16-203ENST00000380469 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
VPS16-203ENST00000380469 FLGP20930 4061 aaPredicted RBP7.33□□□□□ -1.24
VPS16-203ENST00000380469 BIRC6Q9NR09 4857 aa7.29□□□□□ -1.24
VPS16-203ENST00000380469 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
VPS16-203ENST00000380469 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
VPS16-203ENST00000380469 MUC2Q02817 5179 aa7.24□□□□□ -1.25
VPS16-203ENST00000380469 HERC1Q15751 4861 aa7.14□□□□□ -1.27
VPS16-203ENST00000380469 TNP1P09430 55 aa7.11□□□□□ -1.27
VPS16-203ENST00000380469 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
VPS16-203ENST00000380469 HMCN2Q8NDA2 5059 aa7.04□□□□□ -1.28
VPS16-203ENST00000380469 PCLOQ9Y6V0 5065 aa7.03□□□□□ -1.28
VPS16-203ENST00000380469 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.28
VPS16-203ENST00000380469 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
VPS16-203ENST00000380469 M0R2T5 61 aa6.97□□□□□ -1.29
VPS16-203ENST00000380469 LUZP6Q538Z0 58 aa6.96□□□□□ -1.29
VPS16-203ENST00000380469 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
VPS16-203ENST00000380469 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
VPS16-203ENST00000380469 MT1HP80294 61 aa6.87□□□□□ -1.31
VPS16-203ENST00000380469 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
VPS16-203ENST00000380469 MT2AP02795 61 aa6.77□□□□□ -1.33
VPS16-203ENST00000380469 MT1FP04733 61 aa6.77□□□□□ -1.33
VPS16-203ENST00000380469 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
VPS16-203ENST00000380469 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
VPS16-203ENST00000380469 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
VPS16-203ENST00000380469 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
VPS16-203ENST00000380469 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
VPS16-203ENST00000380469 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
VPS16-203ENST00000380469 UBR4Q5T4S7 5183 aa6.64□□□□□ -1.35
VPS16-203ENST00000380469 MT1BP07438 61 aa6.55□□□□□ -1.36
VPS16-203ENST00000380469 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
VPS16-203ENST00000380469 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
VPS16-203ENST00000380469 MT1XP80297 61 aa6.51□□□□□ -1.37
VPS16-203ENST00000380469 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
VPS16-203ENST00000380469 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
VPS16-203ENST00000380469 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
VPS16-203ENST00000380469 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
VPS16-203ENST00000380469 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
VPS16-203ENST00000380469 LCE2BO14633 110 aa6.16□□□□□ -1.42
VPS16-203ENST00000380469 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.43
VPS16-203ENST00000380469 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
VPS16-203ENST00000380469 LCE2AQ5TA79 106 aaPredicted RBP6.01□□□□□ -1.45
VPS16-203ENST00000380469 INE1O15225 51 aa5.99□□□□□ -1.45
VPS16-203ENST00000380469 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
VPS16-203ENST00000380469 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
VPS16-203ENST00000380469 USH2AO75445 5202 aa5.92□□□□□ -1.46
VPS16-203ENST00000380469 KMT2DO14686 5537 aa5.87□□□□□ -1.47
VPS16-203ENST00000380469 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
VPS16-203ENST00000380469 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
VPS16-203ENST00000380469 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
VPS16-203ENST00000380469 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
VPS16-203ENST00000380469 MT1LQ93083 61 aa5.65□□□□□ -1.51
VPS16-203ENST00000380469 MT1EP04732 61 aa5.64□□□□□ -1.51
VPS16-203ENST00000380469 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
VPS16-203ENST00000380469 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
VPS16-203ENST00000380469 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
VPS16-203ENST00000380469 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
VPS16-203ENST00000380469 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
VPS16-203ENST00000380469 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms