RNA–Protein interactions for RNA: ENST00000380241.7

CTPS2-202, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-202ENST00000380241 KRTAP10-1P60331 282 aa4.81□□□□□ -1.64
CTPS2-202ENST00000380241 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
CTPS2-202ENST00000380241 KMT2AQ03164 3969 aa4.79□□□□□ -1.64
CTPS2-202ENST00000380241 RYR3Q15413 4870 aa4.76□□□□□ -1.65
CTPS2-202ENST00000380241 LRP1BQ9NZR2 4599 aa4.75□□□□□ -1.65
CTPS2-202ENST00000380241 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
CTPS2-202ENST00000380241 BIRC6Q9NR09 4857 aa4.75□□□□□ -1.65
CTPS2-202ENST00000380241 STARD9Q9P2P6 4700 aa4.74□□□□□ -1.65
CTPS2-202ENST00000380241 DNAH6Q9C0G6 4158 aa4.74□□□□□ -1.65
CTPS2-202ENST00000380241 RYR2Q92736 4967 aa4.71□□□□□ -1.66
CTPS2-202ENST00000380241 DNAH5Q8TE73 4624 aa4.71□□□□□ -1.66
CTPS2-202ENST00000380241 SACSQ9NZJ4 4579 aa4.7□□□□□ -1.66
CTPS2-202ENST00000380241 M0QZ58 72 aa4.69□□□□□ -1.66
CTPS2-202ENST00000380241 SMR3BP02814 79 aaPredicted RBP4.68□□□□□ -1.66
CTPS2-202ENST00000380241 R4GN34 69 aa4.68□□□□□ -1.66
CTPS2-202ENST00000380241 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
CTPS2-202ENST00000380241 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
CTPS2-202ENST00000380241 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
CTPS2-202ENST00000380241 A0A1B0GVY2 172 aa4.64□□□□□ -1.67
CTPS2-202ENST00000380241 KIAA1109Q2LD37 5005 aa4.62□□□□□ -1.67
CTPS2-202ENST00000380241 HYDINQ4G0P3 5121 aa4.62□□□□□ -1.67
CTPS2-202ENST00000380241 KRTAP10-8P60410 259 aa4.61□□□□□ -1.67
CTPS2-202ENST00000380241 Q5VSD8 79 aa4.6□□□□□ -1.67
CTPS2-202ENST00000380241 KRTAP4-5Q9BYR2 181 aa4.57□□□□□ -1.68
CTPS2-202ENST00000380241 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
CTPS2-202ENST00000380241 PKD1P98161 4303 aa4.51□□□□□ -1.69
CTPS2-202ENST00000380241 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
CTPS2-202ENST00000380241 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
CTPS2-202ENST00000380241 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
CTPS2-202ENST00000380241 HERC2O95714 4834 aa4.49□□□□□ -1.69
CTPS2-202ENST00000380241 RYR1P21817 5038 aa4.47□□□□□ -1.69
CTPS2-202ENST00000380241 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
CTPS2-202ENST00000380241 APOBP04114 4563 aaKnown RBP4.43□□□□□ -1.7
CTPS2-202ENST00000380241 DYNC1H1Q14204 4646 aaKnown RBP4.43□□□□□ -1.7
CTPS2-202ENST00000380241 PKHD1P08F94 4074 aa4.41□□□□□ -1.7
CTPS2-202ENST00000380241 KRTAP10-4P60372 401 aaPredicted RBP4.41□□□□□ -1.7
CTPS2-202ENST00000380241 LRP1Q07954 4544 aaKnown RBP4.41□□□□□ -1.7
CTPS2-202ENST00000380241 PCLOQ9Y6V0 5065 aa4.39□□□□□ -1.71
CTPS2-202ENST00000380241 FAT1Q14517 4588 aa4.36□□□□□ -1.71
CTPS2-202ENST00000380241 ABCA13Q86UQ4 5058 aa4.36□□□□□ -1.71
CTPS2-202ENST00000380241 HSPG2P98160 4391 aa4.36□□□□□ -1.71
CTPS2-202ENST00000380241 FAT3Q8TDW7 4589 aa4.35□□□□□ -1.71
CTPS2-202ENST00000380241 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
CTPS2-202ENST00000380241 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
CTPS2-202ENST00000380241 TNXBP22105 4242 aa4.28□□□□□ -1.72
CTPS2-202ENST00000380241 LORP23490 312 aaPredicted RBP4.25□□□□□ -1.73
CTPS2-202ENST00000380241 HERC1Q15751 4861 aa4.22□□□□□ -1.73
CTPS2-202ENST00000380241 TNP1P09430 55 aa4.22□□□□□ -1.73
CTPS2-202ENST00000380241 INE1O15225 51 aa4.2□□□□□ -1.74
CTPS2-202ENST00000380241 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
CTPS2-202ENST00000380241 LPAP08519 4548 aa4.11□□□□□ -1.75
CTPS2-202ENST00000380241 LCE2DQ5TA82 110 aaPredicted RBP4.09□□□□□ -1.75
CTPS2-202ENST00000380241 LRP2P98164 4655 aa4.06□□□□□ -1.76
CTPS2-202ENST00000380241 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
CTPS2-202ENST00000380241 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
CTPS2-202ENST00000380241 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
CTPS2-202ENST00000380241 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
CTPS2-202ENST00000380241 KRTAP4-1Q9BYQ7 146 aa3.87□□□□□ -1.79
CTPS2-202ENST00000380241 M0R2T5 61 aa3.87□□□□□ -1.79
CTPS2-202ENST00000380241 MUC17Q685J3 4493 aa3.85□□□□□ -1.79
CTPS2-202ENST00000380241 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
CTPS2-202ENST00000380241 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
CTPS2-202ENST00000380241 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
CTPS2-202ENST00000380241 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
CTPS2-202ENST00000380241 LCE2CQ5TA81 110 aa3.74□□□□□ -1.81
CTPS2-202ENST00000380241 SPRR2GQ9BYE4 73 aa3.71□□□□□ -1.81
CTPS2-202ENST00000380241 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
CTPS2-202ENST00000380241 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
CTPS2-202ENST00000380241 LCE2AQ5TA79 106 aaPredicted RBP3.68□□□□□ -1.82
CTPS2-202ENST00000380241 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
CTPS2-202ENST00000380241 MUC2Q02817 5179 aa3.68□□□□□ -1.82
CTPS2-202ENST00000380241 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
CTPS2-202ENST00000380241 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
CTPS2-202ENST00000380241 KRTAP10-10P60014 251 aa3.66□□□□□ -1.82
CTPS2-202ENST00000380241 KRTAP19-1Q8IUB9 90 aa3.65□□□□□ -1.82
CTPS2-202ENST00000380241 LCE2BO14633 110 aa3.6□□□□□ -1.83
CTPS2-202ENST00000380241 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
CTPS2-202ENST00000380241 MT1HP80294 61 aa3.55□□□□□ -1.84
CTPS2-202ENST00000380241 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
CTPS2-202ENST00000380241 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
CTPS2-202ENST00000380241 MT1XP80297 61 aa3.48□□□□□ -1.85
CTPS2-202ENST00000380241 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
CTPS2-202ENST00000380241 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
CTPS2-202ENST00000380241 MT1FP04733 61 aa3.43□□□□□ -1.86
CTPS2-202ENST00000380241 MT2AP02795 61 aa3.41□□□□□ -1.86
CTPS2-202ENST00000380241 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
CTPS2-202ENST00000380241 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
CTPS2-202ENST00000380241 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
CTPS2-202ENST00000380241 MT1BP07438 61 aa3.4□□□□□ -1.86
CTPS2-202ENST00000380241 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
CTPS2-202ENST00000380241 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
CTPS2-202ENST00000380241 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
CTPS2-202ENST00000380241 KRTAP9-8Q9BYQ0 159 aa3.32□□□□□ -1.88
CTPS2-202ENST00000380241 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.28□□□□□ -1.88
CTPS2-202ENST00000380241 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
CTPS2-202ENST00000380241 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
CTPS2-202ENST00000380241 USH2AO75445 5202 aa3.21□□□□□ -1.9
CTPS2-202ENST00000380241 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
CTPS2-202ENST00000380241 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
CTPS2-202ENST00000380241 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms