RNA–Protein interactions for RNA: ENST00000379608.7

TFAP2A-202, Transcript of transcription factor AP-2 alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TFAP2A, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-202ENST00000379608 CRIPTQ9P021 101 aa10.85□□□□□ -0.67
TFAP2A-202ENST00000379608 KRTAP10-8P60410 259 aa10.82□□□□□ -0.68
TFAP2A-202ENST00000379608 LPAP08519 4548 aa10.8□□□□□ -0.68
TFAP2A-202ENST00000379608 KRTAP3-3Q9BYR6 98 aa10.78□□□□□ -0.68
TFAP2A-202ENST00000379608 RYR3Q15413 4870 aa10.75□□□□□ -0.69
TFAP2A-202ENST00000379608 KRTAP17-1Q9BYP8 105 aa10.75□□□□□ -0.69
TFAP2A-202ENST00000379608 KRTAP13-4Q3LI77 160 aa10.73□□□□□ -0.69
TFAP2A-202ENST00000379608 KRTAP10-6P60371 365 aaPredicted RBP10.72□□□□□ -0.69
TFAP2A-202ENST00000379608 A0A0D9SG42 100 aa10.69□□□□□ -0.7
TFAP2A-202ENST00000379608 Q5VSD8 79 aa10.68□□□□□ -0.7
TFAP2A-202ENST00000379608 KRTAP25-1Q3LHN0 102 aa10.68□□□□□ -0.7
TFAP2A-202ENST00000379608 XP32Q5T750 250 aa10.68□□□□□ -0.7
TFAP2A-202ENST00000379608 RYR1P21817 5038 aa10.68□□□□□ -0.7
TFAP2A-202ENST00000379608 KIAA1109Q2LD37 5005 aa10.67□□□□□ -0.7
TFAP2A-202ENST00000379608 RPL37P61927 97 aaKnown RBP10.66□□□□□ -0.7
TFAP2A-202ENST00000379608 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
TFAP2A-202ENST00000379608 LRP2P98164 4655 aa10.62□□□□□ -0.71
TFAP2A-202ENST00000379608 P0C880 135 aa10.58□□□□□ -0.72
TFAP2A-202ENST00000379608 S4R3F8 94 aa10.56□□□□□ -0.72
TFAP2A-202ENST00000379608 K7ERS5 55 aa10.54□□□□□ -0.72
TFAP2A-202ENST00000379608 ROMO1P60602 79 aa10.44□□□□□ -0.74
TFAP2A-202ENST00000379608 MT1HL1P0DM35 61 aa10.43□□□□□ -0.74
TFAP2A-202ENST00000379608 ABCA13Q86UQ4 5058 aa10.39□□□□□ -0.75
TFAP2A-202ENST00000379608 EPPK1P58107 5090 aaKnown RBP10.37□□□□□ -0.75
TFAP2A-202ENST00000379608 C10orf95Q9H7T3 257 aa10.37□□□□□ -0.75
TFAP2A-202ENST00000379608 KRTAP12-2P59991 146 aa10.35□□□□□ -0.75
TFAP2A-202ENST00000379608 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
TFAP2A-202ENST00000379608 H3BS24 57 aa10.25□□□□□ -0.77
TFAP2A-202ENST00000379608 SPINT4Q6UDR6 99 aa10.24□□□□□ -0.77
TFAP2A-202ENST00000379608 KRTAP12-1P59990 96 aa10.2□□□□□ -0.78
TFAP2A-202ENST00000379608 KRTAP4-5Q9BYR2 181 aa10.1□□□□□ -0.79
TFAP2A-202ENST00000379608 MUC17Q685J3 4493 aa10.01□□□□□ -0.81
TFAP2A-202ENST00000379608 M0QZ58 72 aa9.94□□□□□ -0.82
TFAP2A-202ENST00000379608 LORP23490 312 aaPredicted RBP9.93□□□□□ -0.82
TFAP2A-202ENST00000379608 KRTAP4-1Q9BYQ7 146 aa9.89□□□□□ -0.83
TFAP2A-202ENST00000379608 MUC2Q02817 5179 aa9.85□□□□□ -0.83
TFAP2A-202ENST00000379608 R4GN34 69 aa9.83□□□□□ -0.84
TFAP2A-202ENST00000379608 BIRC6Q9NR09 4857 aa9.8□□□□□ -0.84
TFAP2A-202ENST00000379608 KRTAP15-1Q3LI76 137 aa9.79□□□□□ -0.84
TFAP2A-202ENST00000379608 HERC2O95714 4834 aa9.76□□□□□ -0.85
TFAP2A-202ENST00000379608 NDUFAF8A1L188 74 aa9.69□□□□□ -0.86
TFAP2A-202ENST00000379608 SEC61BP60468 96 aaKnown RBP9.67□□□□□ -0.86
TFAP2A-202ENST00000379608 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
TFAP2A-202ENST00000379608 J3QL48 77 aa9.55□□□□□ -0.88
TFAP2A-202ENST00000379608 PCLOQ9Y6V0 5065 aa9.46□□□□□ -0.89
TFAP2A-202ENST00000379608 HERC1Q15751 4861 aa9.43□□□□□ -0.9
TFAP2A-202ENST00000379608 FAT4Q6V0I7 4981 aa9.4□□□□□ -0.9
TFAP2A-202ENST00000379608 FLGP20930 4061 aaPredicted RBP9.39□□□□□ -0.91
TFAP2A-202ENST00000379608 CAMK2N1Q7Z7J9 78 aa9.36□□□□□ -0.91
TFAP2A-202ENST00000379608 PLAC4Q8WY50 150 aa9.31□□□□□ -0.92
TFAP2A-202ENST00000379608 HMCN2Q8NDA2 5059 aa9.19□□□□□ -0.94
TFAP2A-202ENST00000379608 RNF213Q63HN8 5207 aa9.06□□□□□ -0.96
TFAP2A-202ENST00000379608 PP632Q6XCG6 107 aa9.01□□□□□ -0.97
TFAP2A-202ENST00000379608 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
TFAP2A-202ENST00000379608 TNP1P09430 55 aa8.94□□□□□ -0.98
TFAP2A-202ENST00000379608 UBR4Q5T4S7 5183 aa8.92□□□□□ -0.98
TFAP2A-202ENST00000379608 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
TFAP2A-202ENST00000379608 M0R2T5 61 aa8.8□□□□□ -1
TFAP2A-202ENST00000379608 LUZP6Q538Z0 58 aa8.8□□□□□ -1
TFAP2A-202ENST00000379608 SPRR2GQ9BYE4 73 aa8.76□□□□□ -1.01
TFAP2A-202ENST00000379608 MT1HP80294 61 aa8.72□□□□□ -1.01
TFAP2A-202ENST00000379608 MT1FP04733 61 aa8.68□□□□□ -1.02
TFAP2A-202ENST00000379608 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
TFAP2A-202ENST00000379608 LCE3AQ5TA76 89 aa8.63□□□□□ -1.03
TFAP2A-202ENST00000379608 MT2AP02795 61 aa8.62□□□□□ -1.03
TFAP2A-202ENST00000379608 KRTAP23-1A1A580 65 aa8.6□□□□□ -1.03
TFAP2A-202ENST00000379608 SPRR5A0A1B0GTR4 108 aa8.57□□□□□ -1.04
TFAP2A-202ENST00000379608 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
TFAP2A-202ENST00000379608 MT1BP07438 61 aa8.38□□□□□ -1.07
TFAP2A-202ENST00000379608 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
TFAP2A-202ENST00000379608 KRTAP10-5P60370 271 aa8.36□□□□□ -1.07
TFAP2A-202ENST00000379608 MT1XP80297 61 aa8.34□□□□□ -1.07
TFAP2A-202ENST00000379608 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
TFAP2A-202ENST00000379608 KRTAP8-1Q8IUC2 63 aa8.23□□□□□ -1.09
TFAP2A-202ENST00000379608 KRTAP10-7P60409 375 aaPredicted RBP8.21□□□□□ -1.09
TFAP2A-202ENST00000379608 USH2AO75445 5202 aa8.19□□□□□ -1.1
TFAP2A-202ENST00000379608 KRTAP10-12P60413 245 aa8.16□□□□□ -1.1
TFAP2A-202ENST00000379608 KRTAP9-3Q9BYQ3 159 aa8.15□□□□□ -1.11
TFAP2A-202ENST00000379608 KMT2DO14686 5537 aa8.12□□□□□ -1.11
TFAP2A-202ENST00000379608 KRTAP12-3P60328 96 aa8.12□□□□□ -1.11
TFAP2A-202ENST00000379608 LCE2BO14633 110 aa7.91□□□□□ -1.14
TFAP2A-202ENST00000379608 KRTAP19-5Q3LI72 72 aa7.84□□□□□ -1.15
TFAP2A-202ENST00000379608 PRO2289Q9P1D8 64 aa7.8□□□□□ -1.16
TFAP2A-202ENST00000379608 KRTAP4-8A0A0G2JLE6 195 aa7.77□□□□□ -1.16
TFAP2A-202ENST00000379608 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.16
TFAP2A-202ENST00000379608 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
TFAP2A-202ENST00000379608 LCE3CQ5T5A8 94 aa7.64□□□□□ -1.19
TFAP2A-202ENST00000379608 KRTAP9-6A8MVA2 160 aa7.56□□□□□ -1.2
TFAP2A-202ENST00000379608 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
TFAP2A-202ENST00000379608 INE1O15225 51 aa7.47□□□□□ -1.21
TFAP2A-202ENST00000379608 KRTAP19-7Q3SYF9 63 aa7.44□□□□□ -1.22
TFAP2A-202ENST00000379608 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
TFAP2A-202ENST00000379608 SSPOA2VEC9 5147 aa7.36□□□□□ -1.23
TFAP2A-202ENST00000379608 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
TFAP2A-202ENST00000379608 LCE2DQ5TA82 110 aaPredicted RBP7.33□□□□□ -1.24
TFAP2A-202ENST00000379608 MT1LQ93083 61 aa7.19□□□□□ -1.26
TFAP2A-202ENST00000379608 MT1EP04732 61 aa7.17□□□□□ -1.26
TFAP2A-202ENST00000379608 KRTAP2-3P0C7H8 128 aa7.11□□□□□ -1.27
TFAP2A-202ENST00000379608 KRTAP2-4Q9BYR9 128 aa7.11□□□□□ -1.27
TFAP2A-202ENST00000379608 KRTAP2-1Q9BYU5 128 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms