RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 H0Y9P7 68 aa5.8□□□□□ -1.48
DEPDC4-202ENST00000378244 OCR1Q9BZK8 76 aa5.79□□□□□ -1.48
DEPDC4-202ENST00000378244 KRTAP10-6P60371 365 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-202ENST00000378244 CYP4F30PQ9H0H9 118 aa5.78□□□□□ -1.48
DEPDC4-202ENST00000378244 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
DEPDC4-202ENST00000378244 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
DEPDC4-202ENST00000378244 LINC00208Q96KT6 92 aa5.75□□□□□ -1.49
DEPDC4-202ENST00000378244 C1orf64Q8NEQ6 169 aa5.75□□□□□ -1.49
DEPDC4-202ENST00000378244 ATOX1O00244 68 aa5.74□□□□□ -1.49
DEPDC4-202ENST00000378244 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
DEPDC4-202ENST00000378244 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.49
DEPDC4-202ENST00000378244 KLKP1Q107X0 134 aa5.66□□□□□ -1.5
DEPDC4-202ENST00000378244 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
DEPDC4-202ENST00000378244 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.5
DEPDC4-202ENST00000378244 CYSTM1Q9H1C7 97 aa5.65□□□□□ -1.5
DEPDC4-202ENST00000378244 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.51
DEPDC4-202ENST00000378244 FSIP2Q5CZC0 6907 aa5.64□□□□□ -1.51
DEPDC4-202ENST00000378244 A6NN06 94 aa5.64□□□□□ -1.51
DEPDC4-202ENST00000378244 TRAV7A0A075B6U4 112 aa5.63□□□□□ -1.51
DEPDC4-202ENST00000378244 S4R3F8 94 aa5.62□□□□□ -1.51
DEPDC4-202ENST00000378244 H3BPC8 53 aa5.61□□□□□ -1.51
DEPDC4-202ENST00000378244 MT2AP02795 61 aa5.61□□□□□ -1.51
DEPDC4-202ENST00000378244 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
DEPDC4-202ENST00000378244 MT1FP04733 61 aa5.58□□□□□ -1.52
DEPDC4-202ENST00000378244 SERP2Q8N6R1 65 aa5.58□□□□□ -1.52
DEPDC4-202ENST00000378244 SNURFQ9Y675 71 aa5.57□□□□□ -1.52
DEPDC4-202ENST00000378244 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
DEPDC4-202ENST00000378244 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
DEPDC4-202ENST00000378244 C20orf197Q8N268 126 aa5.54□□□□□ -1.52
DEPDC4-202ENST00000378244 ATP5EP56381 51 aaPredicted RBP5.53□□□□□ -1.52
DEPDC4-202ENST00000378244 NDUFC1O43677 76 aa5.48□□□□□ -1.53
DEPDC4-202ENST00000378244 LCE2BO14633 110 aa5.48□□□□□ -1.53
DEPDC4-202ENST00000378244 A6NED7 52 aa5.47□□□□□ -1.53
DEPDC4-202ENST00000378244 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
DEPDC4-202ENST00000378244 Q1T7F1 81 aa5.46□□□□□ -1.54
DEPDC4-202ENST00000378244 KRTAP9-3Q9BYQ3 159 aa5.46□□□□□ -1.54
DEPDC4-202ENST00000378244 USH2AO75445 5202 aa5.45□□□□□ -1.54
DEPDC4-202ENST00000378244 H7BZZ5 65 aa5.41□□□□□ -1.54
DEPDC4-202ENST00000378244 ACYP2P14621 99 aa5.4□□□□□ -1.54
DEPDC4-202ENST00000378244 K7ERS5 55 aa5.4□□□□□ -1.55
DEPDC4-202ENST00000378244 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
DEPDC4-202ENST00000378244 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
DEPDC4-202ENST00000378244 ROMO1P60602 79 aa5.37□□□□□ -1.55
DEPDC4-202ENST00000378244 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
DEPDC4-202ENST00000378244 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
DEPDC4-202ENST00000378244 SPANXA2-OT1Q8N9U9 137 aa5.36□□□□□ -1.55
DEPDC4-202ENST00000378244 CHKB-CPT1BH3BT56 60 aa5.34□□□□□ -1.55
DEPDC4-202ENST00000378244 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
DEPDC4-202ENST00000378244 A8MU10 97 aa5.31□□□□□ -1.56
DEPDC4-202ENST00000378244 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
DEPDC4-202ENST00000378244 H0YAA0 97 aa5.3□□□□□ -1.56
DEPDC4-202ENST00000378244 P0C880 135 aa5.26□□□□□ -1.57
DEPDC4-202ENST00000378244 COA5Q86WW8 74 aa5.25□□□□□ -1.57
DEPDC4-202ENST00000378244 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
DEPDC4-202ENST00000378244 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
DEPDC4-202ENST00000378244 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
DEPDC4-202ENST00000378244 Q5VV11 94 aa5.22□□□□□ -1.57
DEPDC4-202ENST00000378244 R4GN34 69 aa5.19□□□□□ -1.58
DEPDC4-202ENST00000378244 MT1BP07438 61 aa5.17□□□□□ -1.58
DEPDC4-202ENST00000378244 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
DEPDC4-202ENST00000378244 M0QZ58 72 aa5.16□□□□□ -1.58
DEPDC4-202ENST00000378244 MIR22HGQ0VDD5 57 aa5.16□□□□□ -1.58
DEPDC4-202ENST00000378244 KRTAP19-8Q3LI54 63 aa5.15□□□□□ -1.58
DEPDC4-202ENST00000378244 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
DEPDC4-202ENST00000378244 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
DEPDC4-202ENST00000378244 PLAC4Q8WY50 150 aa5.02□□□□□ -1.61
DEPDC4-202ENST00000378244 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
DEPDC4-202ENST00000378244 MACF1Q9UPN3 7388 aaKnown RBP5.01□□□□□ -1.61
DEPDC4-202ENST00000378244 A0A1B0GU69 56 aa4.98□□□□□ -1.61
DEPDC4-202ENST00000378244 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
DEPDC4-202ENST00000378244 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
DEPDC4-202ENST00000378244 A0A1B0GU33 70 aa4.96□□□□□ -1.62
DEPDC4-202ENST00000378244 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
DEPDC4-202ENST00000378244 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
DEPDC4-202ENST00000378244 A0A0D9SG42 100 aa4.94□□□□□ -1.62
DEPDC4-202ENST00000378244 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
DEPDC4-202ENST00000378244 MT1XP80297 61 aa4.91□□□□□ -1.62
DEPDC4-202ENST00000378244 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
DEPDC4-202ENST00000378244 PRO2289Q9P1D8 64 aa4.89□□□□□ -1.63
DEPDC4-202ENST00000378244 LINC01558Q9Y6Z2 57 aa4.87□□□□□ -1.63
DEPDC4-202ENST00000378244 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
DEPDC4-202ENST00000378244 SPINT4Q6UDR6 99 aa4.83□□□□□ -1.64
DEPDC4-202ENST00000378244 KMT2DO14686 5537 aa4.81□□□□□ -1.64
DEPDC4-202ENST00000378244 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
DEPDC4-202ENST00000378244 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
DEPDC4-202ENST00000378244 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
DEPDC4-202ENST00000378244 UQCR11O14957 56 aa4.73□□□□□ -1.65
DEPDC4-202ENST00000378244 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
DEPDC4-202ENST00000378244 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
DEPDC4-202ENST00000378244 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
DEPDC4-202ENST00000378244 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
DEPDC4-202ENST00000378244 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
DEPDC4-202ENST00000378244 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
DEPDC4-202ENST00000378244 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
DEPDC4-202ENST00000378244 SPRR2FQ96RM1 72 aa4.59□□□□□ -1.67
DEPDC4-202ENST00000378244 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
DEPDC4-202ENST00000378244 MDN1Q9NU22 5596 aa4.58□□□□□ -1.68
DEPDC4-202ENST00000378244 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
DEPDC4-202ENST00000378244 NEBP20929 6669 aa4.48□□□□□ -1.69
DEPDC4-202ENST00000378244 TNP1P09430 55 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms