RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
BEST1-201ENST00000378043 H1FX-AS1Q4G0G2 97 aa5.68□□□□□ -1.5
BEST1-201ENST00000378043 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
BEST1-201ENST00000378043 Q5VSD8 79 aa5.67□□□□□ -1.5
BEST1-201ENST00000378043 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
BEST1-201ENST00000378043 RYR3Q15413 4870 aa5.64□□□□□ -1.51
BEST1-201ENST00000378043 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
BEST1-201ENST00000378043 XP32Q5T750 250 aa5.63□□□□□ -1.51
BEST1-201ENST00000378043 RYR1P21817 5038 aa5.63□□□□□ -1.51
BEST1-201ENST00000378043 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
BEST1-201ENST00000378043 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
BEST1-201ENST00000378043 LPAP08519 4548 aa5.6□□□□□ -1.51
BEST1-201ENST00000378043 KIAA1109Q2LD37 5005 aa5.59□□□□□ -1.52
BEST1-201ENST00000378043 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
BEST1-201ENST00000378043 MT1HL1P0DM35 61 aa5.57□□□□□ -1.52
BEST1-201ENST00000378043 KRTAP13-4Q3LI77 160 aa5.53□□□□□ -1.52
BEST1-201ENST00000378043 S4R3F8 94 aa5.52□□□□□ -1.53
BEST1-201ENST00000378043 LRP2P98164 4655 aa5.5□□□□□ -1.53
BEST1-201ENST00000378043 P0C880 135 aa5.46□□□□□ -1.53
BEST1-201ENST00000378043 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
BEST1-201ENST00000378043 CRIPTQ9P021 101 aa5.46□□□□□ -1.54
BEST1-201ENST00000378043 K7ERS5 55 aa5.45□□□□□ -1.54
BEST1-201ENST00000378043 EPPK1P58107 5090 aaKnown RBP5.44□□□□□ -1.54
BEST1-201ENST00000378043 A0A0D9SG42 100 aa5.43□□□□□ -1.54
BEST1-201ENST00000378043 ABCA13Q86UQ4 5058 aa5.43□□□□□ -1.54
BEST1-201ENST00000378043 TPRXLQ17RH7 258 aa5.4□□□□□ -1.54
BEST1-201ENST00000378043 ROMO1P60602 79 aa5.38□□□□□ -1.55
BEST1-201ENST00000378043 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
BEST1-201ENST00000378043 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
BEST1-201ENST00000378043 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
BEST1-201ENST00000378043 MUC2Q02817 5179 aa5.26□□□□□ -1.57
BEST1-201ENST00000378043 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
BEST1-201ENST00000378043 M0QZ58 72 aa5.24□□□□□ -1.57
BEST1-201ENST00000378043 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
BEST1-201ENST00000378043 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
BEST1-201ENST00000378043 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
BEST1-201ENST00000378043 SEC61BP60468 96 aaKnown RBP5.17□□□□□ -1.58
BEST1-201ENST00000378043 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
BEST1-201ENST00000378043 HERC2O95714 4834 aa5.12□□□□□ -1.59
BEST1-201ENST00000378043 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
BEST1-201ENST00000378043 R4GN34 69 aa5.11□□□□□ -1.59
BEST1-201ENST00000378043 J3QL48 77 aa5.08□□□□□ -1.6
BEST1-201ENST00000378043 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
BEST1-201ENST00000378043 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
BEST1-201ENST00000378043 HERC1Q15751 4861 aa5□□□□□ -1.61
BEST1-201ENST00000378043 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
BEST1-201ENST00000378043 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
BEST1-201ENST00000378043 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
BEST1-201ENST00000378043 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.62
BEST1-201ENST00000378043 PCLOQ9Y6V0 5065 aa4.92□□□□□ -1.62
BEST1-201ENST00000378043 RNF213Q63HN8 5207 aa4.86□□□□□ -1.63
BEST1-201ENST00000378043 HMCN2Q8NDA2 5059 aa4.85□□□□□ -1.63
BEST1-201ENST00000378043 CAMK2N1Q7Z7J9 78 aa4.84□□□□□ -1.63
BEST1-201ENST00000378043 LCE2BO14633 110 aa4.81□□□□□ -1.64
BEST1-201ENST00000378043 LCE2CQ5TA81 110 aa4.81□□□□□ -1.64
BEST1-201ENST00000378043 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
BEST1-201ENST00000378043 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
BEST1-201ENST00000378043 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
BEST1-201ENST00000378043 KRTAP19-1Q8IUB9 90 aa4.68□□□□□ -1.66
BEST1-201ENST00000378043 SPRR2GQ9BYE4 73 aa4.68□□□□□ -1.66
BEST1-201ENST00000378043 TNP1P09430 55 aa4.66□□□□□ -1.66
BEST1-201ENST00000378043 LUZP6Q538Z0 58 aa4.65□□□□□ -1.66
BEST1-201ENST00000378043 MT1HP80294 61 aa4.65□□□□□ -1.67
BEST1-201ENST00000378043 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
BEST1-201ENST00000378043 M0R2T5 61 aa4.61□□□□□ -1.67
BEST1-201ENST00000378043 MT1FP04733 61 aa4.59□□□□□ -1.68
BEST1-201ENST00000378043 MT2AP02795 61 aa4.58□□□□□ -1.68
BEST1-201ENST00000378043 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
BEST1-201ENST00000378043 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
BEST1-201ENST00000378043 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
BEST1-201ENST00000378043 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
BEST1-201ENST00000378043 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
BEST1-201ENST00000378043 LCE3AQ5TA76 89 aa4.46□□□□□ -1.69
BEST1-201ENST00000378043 MT1BP07438 61 aa4.44□□□□□ -1.7
BEST1-201ENST00000378043 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
BEST1-201ENST00000378043 MT1XP80297 61 aa4.4□□□□□ -1.71
BEST1-201ENST00000378043 USH2AO75445 5202 aa4.38□□□□□ -1.71
BEST1-201ENST00000378043 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
BEST1-201ENST00000378043 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
BEST1-201ENST00000378043 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
BEST1-201ENST00000378043 KMT2DO14686 5537 aa4.28□□□□□ -1.72
BEST1-201ENST00000378043 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
BEST1-201ENST00000378043 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
BEST1-201ENST00000378043 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
BEST1-201ENST00000378043 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
BEST1-201ENST00000378043 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
BEST1-201ENST00000378043 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
BEST1-201ENST00000378043 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
BEST1-201ENST00000378043 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
BEST1-201ENST00000378043 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
BEST1-201ENST00000378043 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
BEST1-201ENST00000378043 INE1O15225 51 aa3.86□□□□□ -1.79
BEST1-201ENST00000378043 SSPOA2VEC9 5147 aa3.86□□□□□ -1.79
BEST1-201ENST00000378043 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
BEST1-201ENST00000378043 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
BEST1-201ENST00000378043 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
BEST1-201ENST00000378043 MT1EP04732 61 aa3.8□□□□□ -1.8
BEST1-201ENST00000378043 MT1LQ93083 61 aa3.79□□□□□ -1.8
BEST1-201ENST00000378043 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
BEST1-201ENST00000378043 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms