RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 C20orf166-AS1Q96NR2 134 aa8.23□□□□□ -1.09
CSNK1A1-202ENST00000377843 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
CSNK1A1-202ENST00000377843 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
CSNK1A1-202ENST00000377843 A0A0D9SG42 100 aa8.21□□□□□ -1.09
CSNK1A1-202ENST00000377843 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
CSNK1A1-202ENST00000377843 APOBP04114 4563 aaKnown RBP8.18□□□□□ -1.1
CSNK1A1-202ENST00000377843 DMBT1Q9UGM3 2413 aaPredicted RBP8.16□□□□□ -1.1
CSNK1A1-202ENST00000377843 A0A1B0GVY2 172 aa8.14□□□□□ -1.11
CSNK1A1-202ENST00000377843 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
CSNK1A1-202ENST00000377843 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
CSNK1A1-202ENST00000377843 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
CSNK1A1-202ENST00000377843 EPPK1P58107 5090 aaKnown RBP8.05□□□□□ -1.12
CSNK1A1-202ENST00000377843 PKHD1L1Q86WI1 4243 aa8.01□□□□□ -1.13
CSNK1A1-202ENST00000377843 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
CSNK1A1-202ENST00000377843 KIAA1109Q2LD37 5005 aa8□□□□□ -1.13
CSNK1A1-202ENST00000377843 S4R3F8 94 aa8□□□□□ -1.13
CSNK1A1-202ENST00000377843 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
CSNK1A1-202ENST00000377843 HSPG2P98160 4391 aa7.98□□□□□ -1.13
CSNK1A1-202ENST00000377843 KRTAP17-1Q9BYP8 105 aa7.94□□□□□ -1.14
CSNK1A1-202ENST00000377843 KRTAP10-4P60372 401 aaPredicted RBP7.92□□□□□ -1.14
CSNK1A1-202ENST00000377843 RYR1P21817 5038 aa7.91□□□□□ -1.14
CSNK1A1-202ENST00000377843 MYCBP2O75592 4640 aa7.9□□□□□ -1.14
CSNK1A1-202ENST00000377843 KRTAP10-8P60410 259 aa7.88□□□□□ -1.15
CSNK1A1-202ENST00000377843 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
CSNK1A1-202ENST00000377843 XP32Q5T750 250 aa7.86□□□□□ -1.15
CSNK1A1-202ENST00000377843 Q5VSD8 79 aa7.81□□□□□ -1.16
CSNK1A1-202ENST00000377843 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
CSNK1A1-202ENST00000377843 FAT3Q8TDW7 4589 aa7.76□□□□□ -1.17
CSNK1A1-202ENST00000377843 TNXBP22105 4242 aa7.75□□□□□ -1.17
CSNK1A1-202ENST00000377843 KRTAP4-5Q9BYR2 181 aa7.66□□□□□ -1.18
CSNK1A1-202ENST00000377843 ABCA13Q86UQ4 5058 aa7.6□□□□□ -1.19
CSNK1A1-202ENST00000377843 LUZP6Q538Z0 58 aa7.57□□□□□ -1.2
CSNK1A1-202ENST00000377843 LPAP08519 4548 aa7.56□□□□□ -1.2
CSNK1A1-202ENST00000377843 M0QZ58 72 aa7.55□□□□□ -1.2
CSNK1A1-202ENST00000377843 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
CSNK1A1-202ENST00000377843 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
CSNK1A1-202ENST00000377843 HERC2O95714 4834 aa7.5□□□□□ -1.21
CSNK1A1-202ENST00000377843 BIRC6Q9NR09 4857 aa7.45□□□□□ -1.22
CSNK1A1-202ENST00000377843 LRP2P98164 4655 aa7.4□□□□□ -1.23
CSNK1A1-202ENST00000377843 PCLOQ9Y6V0 5065 aa7.32□□□□□ -1.24
CSNK1A1-202ENST00000377843 R4GN34 69 aa7.31□□□□□ -1.24
CSNK1A1-202ENST00000377843 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
CSNK1A1-202ENST00000377843 HERC1Q15751 4861 aa7.29□□□□□ -1.24
CSNK1A1-202ENST00000377843 J3QL48 77 aa7.24□□□□□ -1.25
CSNK1A1-202ENST00000377843 MUC2Q02817 5179 aa7.17□□□□□ -1.26
CSNK1A1-202ENST00000377843 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
CSNK1A1-202ENST00000377843 CAMK2N1Q7Z7J9 78 aa7.01□□□□□ -1.29
CSNK1A1-202ENST00000377843 HMCN2Q8NDA2 5059 aa7□□□□□ -1.29
CSNK1A1-202ENST00000377843 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.29
CSNK1A1-202ENST00000377843 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
CSNK1A1-202ENST00000377843 KRTAP4-1Q9BYQ7 146 aa6.95□□□□□ -1.3
CSNK1A1-202ENST00000377843 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
CSNK1A1-202ENST00000377843 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
CSNK1A1-202ENST00000377843 SEC61BP60468 96 aaKnown RBP6.83□□□□□ -1.32
CSNK1A1-202ENST00000377843 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
CSNK1A1-202ENST00000377843 TNP1P09430 55 aa6.78□□□□□ -1.32
CSNK1A1-202ENST00000377843 KRTAP19-2Q3LHN2 52 aa6.76□□□□□ -1.33
CSNK1A1-202ENST00000377843 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
CSNK1A1-202ENST00000377843 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
CSNK1A1-202ENST00000377843 FLGP20930 4061 aaPredicted RBP6.58□□□□□ -1.36
CSNK1A1-202ENST00000377843 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
CSNK1A1-202ENST00000377843 LCE2CQ5TA81 110 aa6.47□□□□□ -1.37
CSNK1A1-202ENST00000377843 INE1O15225 51 aa6.44□□□□□ -1.38
CSNK1A1-202ENST00000377843 M0R2T5 61 aa6.36□□□□□ -1.39
CSNK1A1-202ENST00000377843 MT1HP80294 61 aa6.32□□□□□ -1.4
CSNK1A1-202ENST00000377843 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
CSNK1A1-202ENST00000377843 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
CSNK1A1-202ENST00000377843 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
CSNK1A1-202ENST00000377843 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
CSNK1A1-202ENST00000377843 MT1FP04733 61 aa6.12□□□□□ -1.43
CSNK1A1-202ENST00000377843 MT2AP02795 61 aa6.11□□□□□ -1.43
CSNK1A1-202ENST00000377843 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
CSNK1A1-202ENST00000377843 KRTAP9-8Q9BYQ0 159 aa6.11□□□□□ -1.43
CSNK1A1-202ENST00000377843 KRTAP12-3P60328 96 aa6.09□□□□□ -1.44
CSNK1A1-202ENST00000377843 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
CSNK1A1-202ENST00000377843 USH2AO75445 5202 aa6□□□□□ -1.45
CSNK1A1-202ENST00000377843 MT1XP80297 61 aa5.98□□□□□ -1.45
CSNK1A1-202ENST00000377843 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
CSNK1A1-202ENST00000377843 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.46
CSNK1A1-202ENST00000377843 MT1BP07438 61 aa5.9□□□□□ -1.47
CSNK1A1-202ENST00000377843 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.47
CSNK1A1-202ENST00000377843 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
CSNK1A1-202ENST00000377843 FSIP2Q5CZC0 6907 aa5.85□□□□□ -1.47
CSNK1A1-202ENST00000377843 LCE2BO14633 110 aa5.76□□□□□ -1.49
CSNK1A1-202ENST00000377843 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
CSNK1A1-202ENST00000377843 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
CSNK1A1-202ENST00000377843 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.49
CSNK1A1-202ENST00000377843 KMT2DO14686 5537 aa5.64□□□□□ -1.51
CSNK1A1-202ENST00000377843 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
CSNK1A1-202ENST00000377843 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
CSNK1A1-202ENST00000377843 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
CSNK1A1-202ENST00000377843 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
CSNK1A1-202ENST00000377843 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
CSNK1A1-202ENST00000377843 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
CSNK1A1-202ENST00000377843 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
CSNK1A1-202ENST00000377843 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
CSNK1A1-202ENST00000377843 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
CSNK1A1-202ENST00000377843 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
CSNK1A1-202ENST00000377843 MT1LQ93083 61 aa5.19□□□□□ -1.58
CSNK1A1-202ENST00000377843 LCE2DQ5TA82 110 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 288.5 ms