RNA–Protein interactions for RNA: ENST00000377792.3

POLR1E-201, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2 BASIC

Gene POLR1E, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-201ENST00000377792 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
POLR1E-201ENST00000377792 HSPG2P98160 4391 aa5.76□□□□□ -1.49
POLR1E-201ENST00000377792 RYR1P21817 5038 aa5.75□□□□□ -1.49
POLR1E-201ENST00000377792 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
POLR1E-201ENST00000377792 KRTAP17-1Q9BYP8 105 aa5.72□□□□□ -1.49
POLR1E-201ENST00000377792 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
POLR1E-201ENST00000377792 H0YAA0 97 aa5.7□□□□□ -1.5
POLR1E-201ENST00000377792 A0A1B0GU33 70 aa5.7□□□□□ -1.5
POLR1E-201ENST00000377792 BIRC6Q9NR09 4857 aa5.69□□□□□ -1.5
POLR1E-201ENST00000377792 XP32Q5T750 250 aa5.69□□□□□ -1.5
POLR1E-201ENST00000377792 H1FX-AS1Q4G0G2 97 aa5.68□□□□□ -1.5
POLR1E-201ENST00000377792 ROMO1P60602 79 aa5.67□□□□□ -1.5
POLR1E-201ENST00000377792 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
POLR1E-201ENST00000377792 MT1HL1P0DM35 61 aa5.65□□□□□ -1.5
POLR1E-201ENST00000377792 DMBT1Q9UGM3 2413 aaPredicted RBP5.64□□□□□ -1.51
POLR1E-201ENST00000377792 KRTAP3-3Q9BYR6 98 aa5.62□□□□□ -1.51
POLR1E-201ENST00000377792 S4R3F8 94 aa5.56□□□□□ -1.52
POLR1E-201ENST00000377792 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
POLR1E-201ENST00000377792 P0C880 135 aa5.54□□□□□ -1.52
POLR1E-201ENST00000377792 ABCA13Q86UQ4 5058 aa5.54□□□□□ -1.52
POLR1E-201ENST00000377792 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
POLR1E-201ENST00000377792 CSAG1Q6PB30 78 aa5.52□□□□□ -1.53
POLR1E-201ENST00000377792 KRTAP3-2Q9BYR7 98 aa5.52□□□□□ -1.53
POLR1E-201ENST00000377792 HERC2O95714 4834 aa5.51□□□□□ -1.53
POLR1E-201ENST00000377792 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
POLR1E-201ENST00000377792 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
POLR1E-201ENST00000377792 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
POLR1E-201ENST00000377792 K7ERS5 55 aa5.48□□□□□ -1.53
POLR1E-201ENST00000377792 LPAP08519 4548 aa5.44□□□□□ -1.54
POLR1E-201ENST00000377792 LRP2P98164 4655 aa5.43□□□□□ -1.54
POLR1E-201ENST00000377792 A0A0D9SG42 100 aa5.42□□□□□ -1.54
POLR1E-201ENST00000377792 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
POLR1E-201ENST00000377792 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
POLR1E-201ENST00000377792 CRIPTQ9P021 101 aa5.32□□□□□ -1.56
POLR1E-201ENST00000377792 NDUFAF8A1L188 74 aa5.3□□□□□ -1.56
POLR1E-201ENST00000377792 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
POLR1E-201ENST00000377792 HERC1Q15751 4861 aa5.28□□□□□ -1.56
POLR1E-201ENST00000377792 M0QZ58 72 aa5.28□□□□□ -1.56
POLR1E-201ENST00000377792 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
POLR1E-201ENST00000377792 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
POLR1E-201ENST00000377792 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
POLR1E-201ENST00000377792 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
POLR1E-201ENST00000377792 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
POLR1E-201ENST00000377792 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
POLR1E-201ENST00000377792 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.58
POLR1E-201ENST00000377792 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.58
POLR1E-201ENST00000377792 R4GN34 69 aa5.15□□□□□ -1.58
POLR1E-201ENST00000377792 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
POLR1E-201ENST00000377792 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
POLR1E-201ENST00000377792 HMCN2Q8NDA2 5059 aa5.1□□□□□ -1.59
POLR1E-201ENST00000377792 MUC2Q02817 5179 aa5.09□□□□□ -1.59
POLR1E-201ENST00000377792 LCE2DQ5TA82 110 aaPredicted RBP5.01□□□□□ -1.61
POLR1E-201ENST00000377792 UBR4Q5T4S7 5183 aa5□□□□□ -1.61
POLR1E-201ENST00000377792 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
POLR1E-201ENST00000377792 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
POLR1E-201ENST00000377792 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
POLR1E-201ENST00000377792 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
POLR1E-201ENST00000377792 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
POLR1E-201ENST00000377792 PLAC4Q8WY50 150 aa4.73□□□□□ -1.65
POLR1E-201ENST00000377792 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
POLR1E-201ENST00000377792 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
POLR1E-201ENST00000377792 MT1HP80294 61 aa4.72□□□□□ -1.65
POLR1E-201ENST00000377792 M0R2T5 61 aa4.72□□□□□ -1.65
POLR1E-201ENST00000377792 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
POLR1E-201ENST00000377792 TNP1P09430 55 aa4.7□□□□□ -1.66
POLR1E-201ENST00000377792 MT2AP02795 61 aa4.64□□□□□ -1.67
POLR1E-201ENST00000377792 MT1FP04733 61 aa4.64□□□□□ -1.67
POLR1E-201ENST00000377792 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
POLR1E-201ENST00000377792 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
POLR1E-201ENST00000377792 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
POLR1E-201ENST00000377792 MT1BP07438 61 aa4.48□□□□□ -1.69
POLR1E-201ENST00000377792 LCE3AQ5TA76 89 aa4.46□□□□□ -1.69
POLR1E-201ENST00000377792 LCE2AQ5TA79 106 aaPredicted RBP4.46□□□□□ -1.69
POLR1E-201ENST00000377792 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
POLR1E-201ENST00000377792 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
POLR1E-201ENST00000377792 MT1XP80297 61 aa4.42□□□□□ -1.7
POLR1E-201ENST00000377792 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
POLR1E-201ENST00000377792 LCE2BO14633 110 aa4.38□□□□□ -1.71
POLR1E-201ENST00000377792 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
POLR1E-201ENST00000377792 INE1O15225 51 aa4.35□□□□□ -1.71
POLR1E-201ENST00000377792 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
POLR1E-201ENST00000377792 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
POLR1E-201ENST00000377792 KRTAP9-2Q9BYQ4 174 aa4.27□□□□□ -1.73
POLR1E-201ENST00000377792 USH2AO75445 5202 aa4.26□□□□□ -1.73
POLR1E-201ENST00000377792 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
POLR1E-201ENST00000377792 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
POLR1E-201ENST00000377792 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
POLR1E-201ENST00000377792 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
POLR1E-201ENST00000377792 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
POLR1E-201ENST00000377792 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
POLR1E-201ENST00000377792 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
POLR1E-201ENST00000377792 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
POLR1E-201ENST00000377792 KMT2DO14686 5537 aa4.01□□□□□ -1.77
POLR1E-201ENST00000377792 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
POLR1E-201ENST00000377792 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
POLR1E-201ENST00000377792 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
POLR1E-201ENST00000377792 MT1EP04732 61 aa3.84□□□□□ -1.79
POLR1E-201ENST00000377792 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.79
POLR1E-201ENST00000377792 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.8
POLR1E-201ENST00000377792 MT1LQ93083 61 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms