RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 STARD9Q9P2P6 4700 aa4.49□□□□□ -1.69
CRNKL1-201ENST00000377327 VPS13DQ5THJ4 4388 aa4.44□□□□□ -1.7
CRNKL1-201ENST00000377327 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
CRNKL1-201ENST00000377327 KRTAP3-2Q9BYR7 98 aa4.42□□□□□ -1.7
CRNKL1-201ENST00000377327 KMT2AQ03164 3969 aa4.41□□□□□ -1.7
CRNKL1-201ENST00000377327 HECTD4Q9Y4D8 3996 aa4.4□□□□□ -1.71
CRNKL1-201ENST00000377327 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
CRNKL1-201ENST00000377327 FRAS1Q86XX4 4008 aa4.37□□□□□ -1.71
CRNKL1-201ENST00000377327 DNAH6Q9C0G6 4158 aa4.35□□□□□ -1.71
CRNKL1-201ENST00000377327 DNAH17Q9UFH2 4485 aa4.32□□□□□ -1.72
CRNKL1-201ENST00000377327 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
CRNKL1-201ENST00000377327 DNAH11Q96DT5 4516 aa4.3□□□□□ -1.72
CRNKL1-201ENST00000377327 HYDINQ4G0P3 5121 aa4.3□□□□□ -1.72
CRNKL1-201ENST00000377327 FAT2Q9NYQ8 4349 aa4.29□□□□□ -1.72
CRNKL1-201ENST00000377327 PKD1P98161 4303 aa4.29□□□□□ -1.72
CRNKL1-201ENST00000377327 A0A1B0GVY2 172 aa4.28□□□□□ -1.72
CRNKL1-201ENST00000377327 DNAH5Q8TE73 4624 aa4.28□□□□□ -1.72
CRNKL1-201ENST00000377327 ALMS1Q8TCU4 4167 aa4.27□□□□□ -1.73
CRNKL1-201ENST00000377327 SACSQ9NZJ4 4579 aa4.21□□□□□ -1.74
CRNKL1-201ENST00000377327 PKHD1P08F94 4074 aa4.17□□□□□ -1.74
CRNKL1-201ENST00000377327 LRP1BQ9NZR2 4599 aa4.14□□□□□ -1.75
CRNKL1-201ENST00000377327 KMT2CQ8NEZ4 4911 aaKnown RBP4.13□□□□□ -1.75
CRNKL1-201ENST00000377327 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
CRNKL1-201ENST00000377327 VPS13BQ7Z7G8 4022 aa4.1□□□□□ -1.75
CRNKL1-201ENST00000377327 RYR2Q92736 4967 aa4.09□□□□□ -1.75
CRNKL1-201ENST00000377327 INE1O15225 51 aa4.08□□□□□ -1.76
CRNKL1-201ENST00000377327 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
CRNKL1-201ENST00000377327 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
CRNKL1-201ENST00000377327 DYNC1H1Q14204 4646 aaKnown RBP4.04□□□□□ -1.76
CRNKL1-201ENST00000377327 APOBP04114 4563 aaKnown RBP4.04□□□□□ -1.76
CRNKL1-201ENST00000377327 MT1HL1P0DM35 61 aa4.03□□□□□ -1.76
CRNKL1-201ENST00000377327 RYR3Q15413 4870 aa4.03□□□□□ -1.76
CRNKL1-201ENST00000377327 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
CRNKL1-201ENST00000377327 LORP23490 312 aaPredicted RBP4□□□□□ -1.77
CRNKL1-201ENST00000377327 PKHD1L1Q86WI1 4243 aa3.98□□□□□ -1.77
CRNKL1-201ENST00000377327 FAT1Q14517 4588 aa3.96□□□□□ -1.77
CRNKL1-201ENST00000377327 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
CRNKL1-201ENST00000377327 KIAA1109Q2LD37 5005 aa3.92□□□□□ -1.78
CRNKL1-201ENST00000377327 HSPG2P98160 4391 aa3.92□□□□□ -1.78
CRNKL1-201ENST00000377327 TNXBP22105 4242 aa3.88□□□□□ -1.79
CRNKL1-201ENST00000377327 KRTAP4-5Q9BYR2 181 aa3.86□□□□□ -1.79
CRNKL1-201ENST00000377327 BIRC6Q9NR09 4857 aa3.85□□□□□ -1.79
CRNKL1-201ENST00000377327 RYR1P21817 5038 aa3.84□□□□□ -1.8
CRNKL1-201ENST00000377327 LCE3AQ5TA76 89 aa3.84□□□□□ -1.8
CRNKL1-201ENST00000377327 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
CRNKL1-201ENST00000377327 KRTAP17-1Q9BYP8 105 aa3.82□□□□□ -1.8
CRNKL1-201ENST00000377327 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
CRNKL1-201ENST00000377327 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
CRNKL1-201ENST00000377327 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
CRNKL1-201ENST00000377327 MYCBP2O75592 4640 aa3.77□□□□□ -1.81
CRNKL1-201ENST00000377327 HERC2O95714 4834 aa3.75□□□□□ -1.81
CRNKL1-201ENST00000377327 PCLOQ9Y6V0 5065 aa3.7□□□□□ -1.82
CRNKL1-201ENST00000377327 ABCA13Q86UQ4 5058 aa3.7□□□□□ -1.82
CRNKL1-201ENST00000377327 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
CRNKL1-201ENST00000377327 HERC1Q15751 4861 aa3.63□□□□□ -1.83
CRNKL1-201ENST00000377327 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
CRNKL1-201ENST00000377327 LPAP08519 4548 aa3.62□□□□□ -1.83
CRNKL1-201ENST00000377327 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
CRNKL1-201ENST00000377327 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
CRNKL1-201ENST00000377327 LRP2P98164 4655 aa3.55□□□□□ -1.84
CRNKL1-201ENST00000377327 UBR4Q5T4S7 5183 aa3.49□□□□□ -1.85
CRNKL1-201ENST00000377327 MUC17Q685J3 4493 aa3.47□□□□□ -1.85
CRNKL1-201ENST00000377327 RNF213Q63HN8 5207 aa3.46□□□□□ -1.86
CRNKL1-201ENST00000377327 MT2AP02795 61 aa3.45□□□□□ -1.86
CRNKL1-201ENST00000377327 KRTAP19-1Q8IUB9 90 aa3.44□□□□□ -1.86
CRNKL1-201ENST00000377327 CRCT1Q9UGL9 99 aa3.42□□□□□ -1.86
CRNKL1-201ENST00000377327 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
CRNKL1-201ENST00000377327 MT1HP80294 61 aa3.42□□□□□ -1.86
CRNKL1-201ENST00000377327 MT1FP04733 61 aa3.41□□□□□ -1.86
CRNKL1-201ENST00000377327 HMCN2Q8NDA2 5059 aa3.39□□□□□ -1.87
CRNKL1-201ENST00000377327 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
CRNKL1-201ENST00000377327 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
CRNKL1-201ENST00000377327 MUC2Q02817 5179 aa3.37□□□□□ -1.87
CRNKL1-201ENST00000377327 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.88
CRNKL1-201ENST00000377327 KRTAP10-7P60409 375 aaPredicted RBP3.32□□□□□ -1.88
CRNKL1-201ENST00000377327 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-201ENST00000377327 KRTAP19-2Q3LHN2 52 aa3.3□□□□□ -1.88
CRNKL1-201ENST00000377327 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
CRNKL1-201ENST00000377327 MT1XP80297 61 aa3.3□□□□□ -1.88
CRNKL1-201ENST00000377327 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
CRNKL1-201ENST00000377327 MT1BP07438 61 aa3.24□□□□□ -1.89
CRNKL1-201ENST00000377327 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.9
CRNKL1-201ENST00000377327 LCE2CQ5TA81 110 aa3.19□□□□□ -1.9
CRNKL1-201ENST00000377327 KRTAP9-8Q9BYQ0 159 aa3.18□□□□□ -1.9
CRNKL1-201ENST00000377327 LCE2DQ5TA82 110 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-201ENST00000377327 KRTAP12-4P60329 112 aa3.15□□□□□ -1.9
CRNKL1-201ENST00000377327 KRTAP4-8A0A0G2JLE6 195 aa3.09□□□□□ -1.91
CRNKL1-201ENST00000377327 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.91
CRNKL1-201ENST00000377327 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
CRNKL1-201ENST00000377327 KRTAP4-7Q9BYR0 210 aa3.03□□□□□ -1.93
CRNKL1-201ENST00000377327 KRTAP9-2Q9BYQ4 174 aa3.01□□□□□ -1.93
CRNKL1-201ENST00000377327 MT1GP13640 62 aa3□□□□□ -1.93
CRNKL1-201ENST00000377327 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
CRNKL1-201ENST00000377327 LCE3BQ5TA77 95 aa2.98□□□□□ -1.93
CRNKL1-201ENST00000377327 MT1LQ93083 61 aa2.96□□□□□ -1.94
CRNKL1-201ENST00000377327 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
CRNKL1-201ENST00000377327 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
CRNKL1-201ENST00000377327 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
CRNKL1-201ENST00000377327 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
CRNKL1-201ENST00000377327 LCE2AQ5TA79 106 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms