RNA–Protein interactions for RNA: ENST00000377110.7

TRPM3-209, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRPM3, Length 12,258 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-209ENST00000377110 ZNF469Q96JG9 3925 aaPredicted RBP2.53□□□□□ -2
TRPM3-209ENST00000377110 LYSTQ99698 3801 aa2.52□□□□□ -2.01
TRPM3-209ENST00000377110 PRKDCP78527 4128 aaKnown RBP2.52□□□□□ -2.01
TRPM3-209ENST00000377110 KRTAP19-4Q3LI73 84 aa2.52□□□□□ -2.01
TRPM3-209ENST00000377110 DNAH11Q96DT5 4516 aa2.51□□□□□ -2.01
TRPM3-209ENST00000377110 CSMD1Q96PZ7 3565 aa2.5□□□□□ -2.01
TRPM3-209ENST00000377110 KRTAP3-2Q9BYR7 98 aa2.49□□□□□ -2.01
TRPM3-209ENST00000377110 DYNC2H1Q8NCM8 4307 aaKnown RBP2.48□□□□□ -2.01
TRPM3-209ENST00000377110 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
TRPM3-209ENST00000377110 MT1HL1P0DM35 61 aa2.47□□□□□ -2.01
TRPM3-209ENST00000377110 FAT2Q9NYQ8 4349 aa2.47□□□□□ -2.01
TRPM3-209ENST00000377110 MT3P25713 68 aa2.46□□□□□ -2.01
TRPM3-209ENST00000377110 VPS13BQ7Z7G8 4022 aa2.46□□□□□ -2.02
TRPM3-209ENST00000377110 DNAH17Q9UFH2 4485 aa2.45□□□□□ -2.02
TRPM3-209ENST00000377110 PLECQ15149 4684 aaKnown RBP2.43□□□□□ -2.02
TRPM3-209ENST00000377110 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
TRPM3-209ENST00000377110 MUC3AQ02505 3323 aa2.43□□□□□ -2.02
TRPM3-209ENST00000377110 KRTAP3-3Q9BYR6 98 aa2.43□□□□□ -2.02
TRPM3-209ENST00000377110 DYNC1H1Q14204 4646 aaKnown RBP2.42□□□□□ -2.02
TRPM3-209ENST00000377110 CSMD2Q7Z408 3487 aa2.41□□□□□ -2.02
TRPM3-209ENST00000377110 SVEP1Q4LDE5 3571 aa2.4□□□□□ -2.03
TRPM3-209ENST00000377110 CSMD3Q7Z407 3707 aa2.4□□□□□ -2.03
TRPM3-209ENST00000377110 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
TRPM3-209ENST00000377110 CRCT1Q9UGL9 99 aa2.39□□□□□ -2.03
TRPM3-209ENST00000377110 KRTAP10-4P60372 401 aaPredicted RBP2.38□□□□□ -2.03
TRPM3-209ENST00000377110 DNAH8Q96JB1 4490 aa2.38□□□□□ -2.03
TRPM3-209ENST00000377110 CUBNO60494 3623 aa2.38□□□□□ -2.03
TRPM3-209ENST00000377110 KRTAP10-5P60370 271 aa2.38□□□□□ -2.03
TRPM3-209ENST00000377110 LCE3AQ5TA76 89 aa2.36□□□□□ -2.03
TRPM3-209ENST00000377110 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.03
TRPM3-209ENST00000377110 KRTAP4-5Q9BYR2 181 aa2.34□□□□□ -2.04
TRPM3-209ENST00000377110 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
TRPM3-209ENST00000377110 SACSQ9NZJ4 4579 aa2.29□□□□□ -2.04
TRPM3-209ENST00000377110 LRP1BQ9NZR2 4599 aa2.29□□□□□ -2.04
TRPM3-209ENST00000377110 PKHD1P08F94 4074 aa2.27□□□□□ -2.05
TRPM3-209ENST00000377110 APOBP04114 4563 aaKnown RBP2.26□□□□□ -2.05
TRPM3-209ENST00000377110 LRP1Q07954 4544 aaKnown RBP2.25□□□□□ -2.05
TRPM3-209ENST00000377110 STARD9Q9P2P6 4700 aa2.25□□□□□ -2.05
TRPM3-209ENST00000377110 KRTAP8-1Q8IUC2 63 aa2.24□□□□□ -2.05
TRPM3-209ENST00000377110 FAT3Q8TDW7 4589 aa2.24□□□□□ -2.05
TRPM3-209ENST00000377110 PKD1P98161 4303 aa2.23□□□□□ -2.05
TRPM3-209ENST00000377110 FAT1Q14517 4588 aa2.21□□□□□ -2.06
TRPM3-209ENST00000377110 LCE3CQ5T5A8 94 aa2.16□□□□□ -2.06
TRPM3-209ENST00000377110 MT1HP80294 61 aa2.16□□□□□ -2.06
TRPM3-209ENST00000377110 LORP23490 312 aaPredicted RBP2.16□□□□□ -2.06
TRPM3-209ENST00000377110 DNHD1Q96M86 4753 aa2.16□□□□□ -2.06
TRPM3-209ENST00000377110 MYCBP2O75592 4640 aa2.14□□□□□ -2.07
TRPM3-209ENST00000377110 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
TRPM3-209ENST00000377110 HSPG2P98160 4391 aa2.12□□□□□ -2.07
TRPM3-209ENST00000377110 TNXBP22105 4242 aa2.12□□□□□ -2.07
TRPM3-209ENST00000377110 KRTAP10-7P60409 375 aaPredicted RBP2.12□□□□□ -2.07
TRPM3-209ENST00000377110 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
TRPM3-209ENST00000377110 MT2AP02795 61 aa2.1□□□□□ -2.07
TRPM3-209ENST00000377110 RYR3Q15413 4870 aa2.1□□□□□ -2.07
TRPM3-209ENST00000377110 KRTAP4-1Q9BYQ7 146 aa2.09□□□□□ -2.07
TRPM3-209ENST00000377110 RYR1P21817 5038 aa2.07□□□□□ -2.08
TRPM3-209ENST00000377110 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
TRPM3-209ENST00000377110 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
TRPM3-209ENST00000377110 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
TRPM3-209ENST00000377110 RYR2Q92736 4967 aa2.04□□□□□ -2.08
TRPM3-209ENST00000377110 MT1FP04733 61 aa2.04□□□□□ -2.08
TRPM3-209ENST00000377110 BIRC6Q9NR09 4857 aa2.02□□□□□ -2.09
TRPM3-209ENST00000377110 KRTAP19-8Q3LI54 63 aa2□□□□□ -2.09
TRPM3-209ENST00000377110 LCE3BQ5TA77 95 aa1.99□□□□□ -2.09
TRPM3-209ENST00000377110 SPRR2EP22531 72 aa1.98□□□□□ -2.09
TRPM3-209ENST00000377110 SPRR2BP35325 72 aa1.98□□□□□ -2.09
TRPM3-209ENST00000377110 SPRR2AP35326 72 aa1.98□□□□□ -2.09
TRPM3-209ENST00000377110 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
TRPM3-209ENST00000377110 SPRR2DP22532 72 aa1.94□□□□□ -2.1
TRPM3-209ENST00000377110 LCE2BO14633 110 aa1.92□□□□□ -2.1
TRPM3-209ENST00000377110 PCLOQ9Y6V0 5065 aa1.92□□□□□ -2.1
TRPM3-209ENST00000377110 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
TRPM3-209ENST00000377110 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
TRPM3-209ENST00000377110 KRTAP19-1Q8IUB9 90 aa1.9□□□□□ -2.1
TRPM3-209ENST00000377110 HERC1Q15751 4861 aa1.89□□□□□ -2.11
TRPM3-209ENST00000377110 MT1XP80297 61 aa1.88□□□□□ -2.11
TRPM3-209ENST00000377110 HERC2O95714 4834 aa1.88□□□□□ -2.11
TRPM3-209ENST00000377110 KRTAP9-8Q9BYQ0 159 aa1.88□□□□□ -2.11
TRPM3-209ENST00000377110 MT1GP13640 62 aa1.87□□□□□ -2.11
TRPM3-209ENST00000377110 PRM1P04553 51 aa1.86□□□□□ -2.11
TRPM3-209ENST00000377110 KRTAP17-1Q9BYP8 105 aa1.86□□□□□ -2.11
TRPM3-209ENST00000377110 KRTAP9-3Q9BYQ3 159 aa1.85□□□□□ -2.11
TRPM3-209ENST00000377110 HYDINQ4G0P3 5121 aa1.85□□□□□ -2.11
TRPM3-209ENST00000377110 LRP2P98164 4655 aa1.84□□□□□ -2.11
TRPM3-209ENST00000377110 MT1BP07438 61 aa1.84□□□□□ -2.11
TRPM3-209ENST00000377110 LCE2CQ5TA81 110 aa1.81□□□□□ -2.12
TRPM3-209ENST00000377110 KIAA1109Q2LD37 5005 aa1.8□□□□□ -2.12
TRPM3-209ENST00000377110 KMT2CQ8NEZ4 4911 aaKnown RBP1.79□□□□□ -2.12
TRPM3-209ENST00000377110 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
TRPM3-209ENST00000377110 KRTAP9-2Q9BYQ4 174 aa1.79□□□□□ -2.12
TRPM3-209ENST00000377110 LCE2DQ5TA82 110 aaPredicted RBP1.79□□□□□ -2.12
TRPM3-209ENST00000377110 MT1LQ93083 61 aa1.78□□□□□ -2.12
TRPM3-209ENST00000377110 LPAP08519 4548 aa1.77□□□□□ -2.13
TRPM3-209ENST00000377110 KRTAP19-6Q3LI70 58 aa1.76□□□□□ -2.13
TRPM3-209ENST00000377110 HMCN2Q8NDA2 5059 aa1.75□□□□□ -2.13
TRPM3-209ENST00000377110 KRTAP9-6A0A140TA67 174 aa1.74□□□□□ -2.13
TRPM3-209ENST00000377110 EPPK1P58107 5090 aaKnown RBP1.73□□□□□ -2.13
TRPM3-209ENST00000377110 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
TRPM3-209ENST00000377110 RNF213Q63HN8 5207 aa1.72□□□□□ -2.13
TRPM3-209ENST00000377110 MT1EP04732 61 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms