RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 KRTAP3-3Q9BYR6 98 aa11.38□□□□□ -0.59
SYNDIG1-201ENST00000376862 DYNC1H1Q14204 4646 aaKnown RBP11.36□□□□□ -0.59
SYNDIG1-201ENST00000376862 FAT1Q14517 4588 aa11.36□□□□□ -0.59
SYNDIG1-201ENST00000376862 KRTAP3-2Q9BYR7 98 aa11.35□□□□□ -0.59
SYNDIG1-201ENST00000376862 DMBT1Q9UGM3 2413 aaPredicted RBP11.35□□□□□ -0.59
SYNDIG1-201ENST00000376862 KRTAP15-1Q3LI76 137 aa11.33□□□□□ -0.6
SYNDIG1-201ENST00000376862 NDUFAF8A1L188 74 aa11.32□□□□□ -0.6
SYNDIG1-201ENST00000376862 KMT2CQ8NEZ4 4911 aaKnown RBP11.31□□□□□ -0.6
SYNDIG1-201ENST00000376862 A0A1B0GVY2 172 aa11.24□□□□□ -0.61
SYNDIG1-201ENST00000376862 APOBP04114 4563 aaKnown RBP11.22□□□□□ -0.61
SYNDIG1-201ENST00000376862 S4R3F8 94 aa11.22□□□□□ -0.61
SYNDIG1-201ENST00000376862 RYR2Q92736 4967 aa11.18□□□□□ -0.62
SYNDIG1-201ENST00000376862 KRTAP12-2P59991 146 aa11.18□□□□□ -0.62
SYNDIG1-201ENST00000376862 KRTAP10-4P60372 401 aaPredicted RBP11.1□□□□□ -0.63
SYNDIG1-201ENST00000376862 KRTAP10-8P60410 259 aa11.09□□□□□ -0.63
SYNDIG1-201ENST00000376862 HSPG2P98160 4391 aa11.04□□□□□ -0.64
SYNDIG1-201ENST00000376862 KRTAP12-1P59990 96 aa11.03□□□□□ -0.64
SYNDIG1-201ENST00000376862 FAT3Q8TDW7 4589 aa11.02□□□□□ -0.64
SYNDIG1-201ENST00000376862 LRP1Q07954 4544 aaKnown RBP10.98□□□□□ -0.65
SYNDIG1-201ENST00000376862 XP32Q5T750 250 aa10.95□□□□□ -0.66
SYNDIG1-201ENST00000376862 RYR3Q15413 4870 aa10.95□□□□□ -0.66
SYNDIG1-201ENST00000376862 TNXBP22105 4242 aa10.87□□□□□ -0.67
SYNDIG1-201ENST00000376862 MYCBP2O75592 4640 aa10.78□□□□□ -0.68
SYNDIG1-201ENST00000376862 Q5VSD8 79 aa10.77□□□□□ -0.69
SYNDIG1-201ENST00000376862 M0QZ58 72 aa10.71□□□□□ -0.69
SYNDIG1-201ENST00000376862 KIAA1109Q2LD37 5005 aa10.69□□□□□ -0.7
SYNDIG1-201ENST00000376862 RYR1P21817 5038 aa10.66□□□□□ -0.7
SYNDIG1-201ENST00000376862 KRTAP17-1Q9BYP8 105 aa10.66□□□□□ -0.7
SYNDIG1-201ENST00000376862 LPAP08519 4548 aa10.59□□□□□ -0.71
SYNDIG1-201ENST00000376862 EPPK1P58107 5090 aaKnown RBP10.56□□□□□ -0.72
SYNDIG1-201ENST00000376862 PLAC4Q8WY50 150 aa10.52□□□□□ -0.73
SYNDIG1-201ENST00000376862 A0A0A0MQY5 61 aa10.45□□□□□ -0.74
SYNDIG1-201ENST00000376862 MT1HL1P0DM35 61 aa10.41□□□□□ -0.74
SYNDIG1-201ENST00000376862 R4GN34 69 aa10.38□□□□□ -0.75
SYNDIG1-201ENST00000376862 LUZP6Q538Z0 58 aa10.37□□□□□ -0.75
SYNDIG1-201ENST00000376862 LRP2P98164 4655 aa10.35□□□□□ -0.75
SYNDIG1-201ENST00000376862 ABCA13Q86UQ4 5058 aa10.29□□□□□ -0.76
SYNDIG1-201ENST00000376862 LORP23490 312 aaPredicted RBP10.24□□□□□ -0.77
SYNDIG1-201ENST00000376862 KRTAP4-5Q9BYR2 181 aa10.18□□□□□ -0.78
SYNDIG1-201ENST00000376862 PP632Q6XCG6 107 aa10.04□□□□□ -0.8
SYNDIG1-201ENST00000376862 CAMK2N1Q7Z7J9 78 aa9.95□□□□□ -0.82
SYNDIG1-201ENST00000376862 MUC17Q685J3 4493 aa9.9□□□□□ -0.82
SYNDIG1-201ENST00000376862 HERC2O95714 4834 aa9.89□□□□□ -0.83
SYNDIG1-201ENST00000376862 J3QL48 77 aa9.84□□□□□ -0.83
SYNDIG1-201ENST00000376862 SEC61BP60468 96 aaKnown RBP9.73□□□□□ -0.85
SYNDIG1-201ENST00000376862 KRTAP4-1Q9BYQ7 146 aa9.72□□□□□ -0.85
SYNDIG1-201ENST00000376862 MUC2Q02817 5179 aa9.72□□□□□ -0.85
SYNDIG1-201ENST00000376862 SPRR5A0A1B0GTR4 108 aa9.65□□□□□ -0.86
SYNDIG1-201ENST00000376862 TNP1P09430 55 aa9.61□□□□□ -0.87
SYNDIG1-201ENST00000376862 BIRC6Q9NR09 4857 aa9.6□□□□□ -0.87
SYNDIG1-201ENST00000376862 HERC1Q15751 4861 aa9.59□□□□□ -0.88
SYNDIG1-201ENST00000376862 KRTAP19-2Q3LHN2 52 aa9.57□□□□□ -0.88
SYNDIG1-201ENST00000376862 PCLOQ9Y6V0 5065 aa9.56□□□□□ -0.88
SYNDIG1-201ENST00000376862 KRTAP23-1A1A580 65 aa9.51□□□□□ -0.89
SYNDIG1-201ENST00000376862 FLGP20930 4061 aaPredicted RBP9.3□□□□□ -0.92
SYNDIG1-201ENST00000376862 HMCN2Q8NDA2 5059 aa9.29□□□□□ -0.92
SYNDIG1-201ENST00000376862 FAT4Q6V0I7 4981 aa9.23□□□□□ -0.93
SYNDIG1-201ENST00000376862 PRO2289Q9P1D8 64 aa9.17□□□□□ -0.94
SYNDIG1-201ENST00000376862 RNF213Q63HN8 5207 aa9.15□□□□□ -0.94
SYNDIG1-201ENST00000376862 LCE3AQ5TA76 89 aa9.11□□□□□ -0.95
SYNDIG1-201ENST00000376862 UBR4Q5T4S7 5183 aa9.06□□□□□ -0.96
SYNDIG1-201ENST00000376862 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
SYNDIG1-201ENST00000376862 INE1O15225 51 aa8.95□□□□□ -0.98
SYNDIG1-201ENST00000376862 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
SYNDIG1-201ENST00000376862 KRTAP19-1Q8IUB9 90 aa8.93□□□□□ -0.98
SYNDIG1-201ENST00000376862 M0R2T5 61 aa8.81□□□□□ -1
SYNDIG1-201ENST00000376862 KRTAP8-1Q8IUC2 63 aa8.79□□□□□ -1
SYNDIG1-201ENST00000376862 MT1HP80294 61 aa8.74□□□□□ -1.01
SYNDIG1-201ENST00000376862 KRTAP12-3P60328 96 aa8.59□□□□□ -1.03
SYNDIG1-201ENST00000376862 KRTAP10-12P60413 245 aa8.55□□□□□ -1.04
SYNDIG1-201ENST00000376862 KRTAP10-10P60014 251 aa8.55□□□□□ -1.04
SYNDIG1-201ENST00000376862 MT1FP04733 61 aa8.54□□□□□ -1.04
SYNDIG1-201ENST00000376862 MT2AP02795 61 aa8.53□□□□□ -1.04
SYNDIG1-201ENST00000376862 KRTAP10-5P60370 271 aa8.51□□□□□ -1.05
SYNDIG1-201ENST00000376862 KRTAP9-8Q9BYQ0 159 aa8.49□□□□□ -1.05
SYNDIG1-201ENST00000376862 MT1XP80297 61 aa8.47□□□□□ -1.05
SYNDIG1-201ENST00000376862 KRTAP19-8Q3LI54 63 aa8.44□□□□□ -1.06
SYNDIG1-201ENST00000376862 MT1BP07438 61 aa8.38□□□□□ -1.07
SYNDIG1-201ENST00000376862 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
SYNDIG1-201ENST00000376862 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
SYNDIG1-201ENST00000376862 LCE3CQ5T5A8 94 aa8.13□□□□□ -1.11
SYNDIG1-201ENST00000376862 USH2AO75445 5202 aa8.08□□□□□ -1.12
SYNDIG1-201ENST00000376862 KRTAP19-5Q3LI72 72 aa8.08□□□□□ -1.12
SYNDIG1-201ENST00000376862 KRTAP9-6A8MVA2 160 aa7.97□□□□□ -1.13
SYNDIG1-201ENST00000376862 LCE2BO14633 110 aa7.88□□□□□ -1.15
SYNDIG1-201ENST00000376862 LCE2AQ5TA79 106 aaPredicted RBP7.87□□□□□ -1.15
SYNDIG1-201ENST00000376862 KMT2DO14686 5537 aa7.86□□□□□ -1.15
SYNDIG1-201ENST00000376862 KRTAP2-3P0C7H8 128 aa7.83□□□□□ -1.16
SYNDIG1-201ENST00000376862 KRTAP2-4Q9BYR9 128 aa7.83□□□□□ -1.16
SYNDIG1-201ENST00000376862 KRTAP2-1Q9BYU5 128 aa7.83□□□□□ -1.16
SYNDIG1-201ENST00000376862 KRTAP4-8A0A0G2JLE6 195 aa7.72□□□□□ -1.17
SYNDIG1-201ENST00000376862 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
SYNDIG1-201ENST00000376862 KRTAP4-7Q9BYR0 210 aa7.7□□□□□ -1.18
SYNDIG1-201ENST00000376862 FSIP2Q5CZC0 6907 aa7.59□□□□□ -1.19
SYNDIG1-201ENST00000376862 KRTAP19-7Q3SYF9 63 aa7.54□□□□□ -1.2
SYNDIG1-201ENST00000376862 SSPOA2VEC9 5147 aa7.4□□□□□ -1.23
SYNDIG1-201ENST00000376862 MT1LQ93083 61 aa7.36□□□□□ -1.23
SYNDIG1-201ENST00000376862 MT1EP04732 61 aa7.26□□□□□ -1.25
SYNDIG1-201ENST00000376862 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
SYNDIG1-201ENST00000376862 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms