RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 KLKP1Q107X0 134 aa9.39□□□□□ -0.91
VSX1-201ENST00000376707 ATP5EP2Q5VTU8 51 aa9.39□□□□□ -0.91
VSX1-201ENST00000376707 KRTAP4-8Q9BYQ9 185 aa9.37□□□□□ -0.91
VSX1-201ENST00000376707 NEBP20929 6669 aa9.34□□□□□ -0.91
VSX1-201ENST00000376707 KRTAP10-5P60370 271 aa9.32□□□□□ -0.92
VSX1-201ENST00000376707 A0A087WVE0 104 aa9.31□□□□□ -0.92
VSX1-201ENST00000376707 UQCRQO14949 82 aa9.31□□□□□ -0.92
VSX1-201ENST00000376707 HIST1H4AP62805 103 aaKnown RBP9.3□□□□□ -0.92
VSX1-201ENST00000376707 ATOX1O00244 68 aa9.28□□□□□ -0.92
VSX1-201ENST00000376707 H0Y9P7 68 aa9.25□□□□□ -0.93
VSX1-201ENST00000376707 CRIPTQ9P021 101 aa9.25□□□□□ -0.93
VSX1-201ENST00000376707 MUC12Q9UKN1 5478 aa9.25□□□□□ -0.93
VSX1-201ENST00000376707 LINC00643Q86TS7 51 aa9.21□□□□□ -0.94
VSX1-201ENST00000376707 IMUPQ9GZP8 106 aa9.21□□□□□ -0.94
VSX1-201ENST00000376707 NDUFC1O43677 76 aa9.17□□□□□ -0.94
VSX1-201ENST00000376707 H0YAA0 97 aa9.16□□□□□ -0.94
VSX1-201ENST00000376707 A8MUN3 132 aa9.15□□□□□ -0.94
VSX1-201ENST00000376707 KRTAP5-9P26371 169 aa9.1□□□□□ -0.95
VSX1-201ENST00000376707 LINC00208Q96KT6 92 aa9.1□□□□□ -0.95
VSX1-201ENST00000376707 OCR1Q9BZK8 76 aa9.09□□□□□ -0.95
VSX1-201ENST00000376707 MP68P56378 58 aa9.05□□□□□ -0.96
VSX1-201ENST00000376707 KRTAP20-1Q3LI63 56 aa9.05□□□□□ -0.96
VSX1-201ENST00000376707 KMT2DO14686 5537 aa9.03□□□□□ -0.96
VSX1-201ENST00000376707 A0A1B0GV90 55 aa9.01□□□□□ -0.97
VSX1-201ENST00000376707 ADM2Q7Z4H4 148 aa9□□□□□ -0.97
VSX1-201ENST00000376707 MDN1Q9NU22 5596 aa9□□□□□ -0.97
VSX1-201ENST00000376707 KRTAP4-12Q9BQ66 201 aa8.96□□□□□ -0.98
VSX1-201ENST00000376707 LCE3BQ5TA77 95 aa8.94□□□□□ -0.98
VSX1-201ENST00000376707 H3BPC8 53 aa8.93□□□□□ -0.98
VSX1-201ENST00000376707 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
VSX1-201ENST00000376707 J3QR89 54 aa8.89□□□□□ -0.99
VSX1-201ENST00000376707 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
VSX1-201ENST00000376707 DMAC1Q96GE9 116 aa8.86□□□□□ -0.99
VSX1-201ENST00000376707 MT1XP80297 61 aa8.84□□□□□ -0.99
VSX1-201ENST00000376707 SPRR2FQ96RM1 72 aa8.82□□□□□ -1
VSX1-201ENST00000376707 SCGB1A1P11684 91 aa8.81□□□□□ -1
VSX1-201ENST00000376707 R4GN34 69 aa8.81□□□□□ -1
VSX1-201ENST00000376707 P0C880 135 aa8.79□□□□□ -1
VSX1-201ENST00000376707 C20orf197Q8N268 126 aa8.79□□□□□ -1
VSX1-201ENST00000376707 KRTAP9-9Q9BYP9 154 aa8.76□□□□□ -1.01
VSX1-201ENST00000376707 KRTAP9-4Q9BYQ2 154 aa8.76□□□□□ -1.01
VSX1-201ENST00000376707 KRTAP2-3P0C7H8 128 aa8.75□□□□□ -1.01
VSX1-201ENST00000376707 KRTAP2-4Q9BYR9 128 aa8.75□□□□□ -1.01
VSX1-201ENST00000376707 SPRR2EP22531 72 aa8.74□□□□□ -1.01
VSX1-201ENST00000376707 SPRR2BP35325 72 aa8.74□□□□□ -1.01
VSX1-201ENST00000376707 SPRR2AP35326 72 aa8.74□□□□□ -1.01
VSX1-201ENST00000376707 M0QZ58 72 aa8.72□□□□□ -1.01
VSX1-201ENST00000376707 KRTAP8-1Q8IUC2 63 aa8.72□□□□□ -1.01
VSX1-201ENST00000376707 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
VSX1-201ENST00000376707 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
VSX1-201ENST00000376707 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
VSX1-201ENST00000376707 ACYP2P14621 99 aa8.6□□□□□ -1.03
VSX1-201ENST00000376707 KRTAP4-8A0A0G2JLE6 195 aa8.59□□□□□ -1.03
VSX1-201ENST00000376707 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
VSX1-201ENST00000376707 SMIM20Q8N5G0 67 aa8.59□□□□□ -1.03
VSX1-201ENST00000376707 LCE1AQ5T7P2 110 aa8.57□□□□□ -1.04
VSX1-201ENST00000376707 K7ERU9 68 aa8.51□□□□□ -1.05
VSX1-201ENST00000376707 SPTSSBQ8NFR3 76 aa8.51□□□□□ -1.05
VSX1-201ENST00000376707 SPRR2DP22532 72 aa8.46□□□□□ -1.06
VSX1-201ENST00000376707 KRTAP2-2Q9BYT5 123 aa8.46□□□□□ -1.06
VSX1-201ENST00000376707 KRTAP2-1Q9BYU5 128 aa8.46□□□□□ -1.06
VSX1-201ENST00000376707 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
VSX1-201ENST00000376707 CHKB-CPT1BH3BT56 60 aa8.41□□□□□ -1.06
VSX1-201ENST00000376707 KRTAP10-12P60413 245 aa8.39□□□□□ -1.07
VSX1-201ENST00000376707 SNURFQ9Y675 71 aa8.39□□□□□ -1.07
VSX1-201ENST00000376707 LCE1DQ5T752 114 aa8.35□□□□□ -1.07
VSX1-201ENST00000376707 SPANXA2-OT1Q8N9U9 137 aa8.35□□□□□ -1.07
VSX1-201ENST00000376707 KRTAP4-7Q9BYR0 210 aa8.3□□□□□ -1.08
VSX1-201ENST00000376707 SERP2Q8N6R1 65 aa8.26□□□□□ -1.09
VSX1-201ENST00000376707 KRTAP13-4Q3LI77 160 aa8.19□□□□□ -1.1
VSX1-201ENST00000376707 KRTAP4-9Q9BYQ8 210 aa8.11□□□□□ -1.11
VSX1-201ENST00000376707 LCE4AQ5TA78 99 aa8.1□□□□□ -1.11
VSX1-201ENST00000376707 COA5Q86WW8 74 aa8.09□□□□□ -1.11
VSX1-201ENST00000376707 CAMK2N1Q7Z7J9 78 aa8.08□□□□□ -1.12
VSX1-201ENST00000376707 COX7CP15954 63 aa7.97□□□□□ -1.13
VSX1-201ENST00000376707 SEC61GP60059 68 aa7.96□□□□□ -1.14
VSX1-201ENST00000376707 KRTAP19-4Q3LI73 84 aa7.96□□□□□ -1.14
VSX1-201ENST00000376707 SERP1Q9Y6X1 66 aa7.95□□□□□ -1.14
VSX1-201ENST00000376707 KRTAP4-2Q9BYR5 136 aa7.94□□□□□ -1.14
VSX1-201ENST00000376707 H3BS24 57 aa7.9□□□□□ -1.14
VSX1-201ENST00000376707 KRTAP19-7Q3SYF9 63 aa7.9□□□□□ -1.14
VSX1-201ENST00000376707 A0A0D9SG42 100 aa7.89□□□□□ -1.15
VSX1-201ENST00000376707 H7BZZ5 65 aa7.89□□□□□ -1.15
VSX1-201ENST00000376707 LCE5AQ5TCM9 118 aa7.88□□□□□ -1.15
VSX1-201ENST00000376707 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
VSX1-201ENST00000376707 CYSTM1Q9H1C7 97 aa7.86□□□□□ -1.15
VSX1-201ENST00000376707 A0A1B0GU33 70 aa7.85□□□□□ -1.15
VSX1-201ENST00000376707 MT1EP04732 61 aa7.85□□□□□ -1.15
VSX1-201ENST00000376707 KRTAP19-3Q7Z4W3 81 aa7.83□□□□□ -1.16
VSX1-201ENST00000376707 DSTQ03001 7570 aaKnown RBP7.82□□□□□ -1.16
VSX1-201ENST00000376707 KRTAP4-11Q9BYQ6 195 aa7.82□□□□□ -1.16
VSX1-201ENST00000376707 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
VSX1-201ENST00000376707 SPINT4Q6UDR6 99 aa7.78□□□□□ -1.16
VSX1-201ENST00000376707 GPR98Q8WXG9 6306 aa7.74□□□□□ -1.17
VSX1-201ENST00000376707 A0A1B0GU69 56 aa7.67□□□□□ -1.18
VSX1-201ENST00000376707 KRTAP19-5Q3LI72 72 aa7.66□□□□□ -1.18
VSX1-201ENST00000376707 SMIM26A0A096LP01 95 aa7.64□□□□□ -1.19
VSX1-201ENST00000376707 MT1GP13640 62 aa7.63□□□□□ -1.19
VSX1-201ENST00000376707 ANAPC13Q9BS18 74 aa7.6□□□□□ -1.19
VSX1-201ENST00000376707 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 1777.9 ms