RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 FLG2Q5D862 2391 aaPredicted RBP5.15□□□□□ -1.58
TRIM39-202ENST00000376659 P0C880 135 aa5.15□□□□□ -1.58
TRIM39-202ENST00000376659 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
TRIM39-202ENST00000376659 KRTAP10-8P60410 259 aa5.12□□□□□ -1.59
TRIM39-202ENST00000376659 DMBT1Q9UGM3 2413 aaPredicted RBP5.12□□□□□ -1.59
TRIM39-202ENST00000376659 ABCA13Q86UQ4 5058 aa5.1□□□□□ -1.59
TRIM39-202ENST00000376659 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
TRIM39-202ENST00000376659 KIAA1109Q2LD37 5005 aa5.09□□□□□ -1.6
TRIM39-202ENST00000376659 Q8N1X5 172 aa5.08□□□□□ -1.6
TRIM39-202ENST00000376659 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
TRIM39-202ENST00000376659 C9orf92A6NGG3 77 aa5.06□□□□□ -1.6
TRIM39-202ENST00000376659 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
TRIM39-202ENST00000376659 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
TRIM39-202ENST00000376659 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
TRIM39-202ENST00000376659 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
TRIM39-202ENST00000376659 LRP2P98164 4655 aa4.99□□□□□ -1.61
TRIM39-202ENST00000376659 Q5VSD8 79 aa4.97□□□□□ -1.61
TRIM39-202ENST00000376659 H0YAA0 97 aa4.97□□□□□ -1.61
TRIM39-202ENST00000376659 XP32Q5T750 250 aa4.96□□□□□ -1.62
TRIM39-202ENST00000376659 RPL37P61927 97 aaKnown RBP4.95□□□□□ -1.62
TRIM39-202ENST00000376659 COX6B2Q6YFQ2 88 aa4.94□□□□□ -1.62
TRIM39-202ENST00000376659 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
TRIM39-202ENST00000376659 KRTAP3-2Q9BYR7 98 aa4.89□□□□□ -1.63
TRIM39-202ENST00000376659 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
TRIM39-202ENST00000376659 K7ERS5 55 aa4.85□□□□□ -1.63
TRIM39-202ENST00000376659 H1FX-AS1Q4G0G2 97 aa4.85□□□□□ -1.63
TRIM39-202ENST00000376659 HERC2O95714 4834 aa4.83□□□□□ -1.64
TRIM39-202ENST00000376659 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
TRIM39-202ENST00000376659 KRTAP13-4Q3LI77 160 aa4.82□□□□□ -1.64
TRIM39-202ENST00000376659 BIRC6Q9NR09 4857 aa4.82□□□□□ -1.64
TRIM39-202ENST00000376659 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
TRIM39-202ENST00000376659 TPRXLQ17RH7 258 aa4.8□□□□□ -1.64
TRIM39-202ENST00000376659 A0A1B0GU33 70 aa4.79□□□□□ -1.64
TRIM39-202ENST00000376659 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
TRIM39-202ENST00000376659 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
TRIM39-202ENST00000376659 S4R3F8 94 aa4.73□□□□□ -1.65
TRIM39-202ENST00000376659 SEC61BP60468 96 aaKnown RBP4.72□□□□□ -1.65
TRIM39-202ENST00000376659 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
TRIM39-202ENST00000376659 KRTAP4-1Q9BYQ7 146 aa4.68□□□□□ -1.66
TRIM39-202ENST00000376659 A0A0D9SG42 100 aa4.66□□□□□ -1.66
TRIM39-202ENST00000376659 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.66
TRIM39-202ENST00000376659 HMCN2Q8NDA2 5059 aa4.64□□□□□ -1.67
TRIM39-202ENST00000376659 MUC2Q02817 5179 aa4.63□□□□□ -1.67
TRIM39-202ENST00000376659 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
TRIM39-202ENST00000376659 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
TRIM39-202ENST00000376659 HERC1Q15751 4861 aa4.58□□□□□ -1.68
TRIM39-202ENST00000376659 J3QL48 77 aa4.52□□□□□ -1.69
TRIM39-202ENST00000376659 LORP23490 312 aaPredicted RBP4.51□□□□□ -1.69
TRIM39-202ENST00000376659 M0QZ58 72 aa4.48□□□□□ -1.69
TRIM39-202ENST00000376659 LCE2CQ5TA81 110 aa4.41□□□□□ -1.7
TRIM39-202ENST00000376659 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
TRIM39-202ENST00000376659 FAT4Q6V0I7 4981 aa4.37□□□□□ -1.71
TRIM39-202ENST00000376659 RNF213Q63HN8 5207 aa4.37□□□□□ -1.71
TRIM39-202ENST00000376659 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
TRIM39-202ENST00000376659 UBR4Q5T4S7 5183 aa4.34□□□□□ -1.71
TRIM39-202ENST00000376659 R4GN34 69 aa4.28□□□□□ -1.73
TRIM39-202ENST00000376659 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
TRIM39-202ENST00000376659 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
TRIM39-202ENST00000376659 MT1HP80294 61 aa4.19□□□□□ -1.74
TRIM39-202ENST00000376659 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
TRIM39-202ENST00000376659 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
TRIM39-202ENST00000376659 MT1FP04733 61 aa4.11□□□□□ -1.75
TRIM39-202ENST00000376659 MT2AP02795 61 aa4.1□□□□□ -1.75
TRIM39-202ENST00000376659 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
TRIM39-202ENST00000376659 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
TRIM39-202ENST00000376659 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
TRIM39-202ENST00000376659 M0R2T5 61 aa4□□□□□ -1.77
TRIM39-202ENST00000376659 MT1BP07438 61 aa4□□□□□ -1.77
TRIM39-202ENST00000376659 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
TRIM39-202ENST00000376659 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
TRIM39-202ENST00000376659 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
TRIM39-202ENST00000376659 MT1XP80297 61 aa3.95□□□□□ -1.78
TRIM39-202ENST00000376659 INE1O15225 51 aa3.91□□□□□ -1.78
TRIM39-202ENST00000376659 TNP1P09430 55 aa3.91□□□□□ -1.78
TRIM39-202ENST00000376659 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
TRIM39-202ENST00000376659 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
TRIM39-202ENST00000376659 LCE2AQ5TA79 106 aaPredicted RBP3.84□□□□□ -1.8
TRIM39-202ENST00000376659 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
TRIM39-202ENST00000376659 LCE2BO14633 110 aa3.81□□□□□ -1.8
TRIM39-202ENST00000376659 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
TRIM39-202ENST00000376659 USH2AO75445 5202 aa3.76□□□□□ -1.81
TRIM39-202ENST00000376659 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
TRIM39-202ENST00000376659 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
TRIM39-202ENST00000376659 KMT2DO14686 5537 aa3.69□□□□□ -1.82
TRIM39-202ENST00000376659 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
TRIM39-202ENST00000376659 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
TRIM39-202ENST00000376659 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
TRIM39-202ENST00000376659 FSIP2Q5CZC0 6907 aa3.56□□□□□ -1.84
TRIM39-202ENST00000376659 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
TRIM39-202ENST00000376659 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
TRIM39-202ENST00000376659 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
TRIM39-202ENST00000376659 LCE2DQ5TA82 110 aaPredicted RBP3.52□□□□□ -1.85
TRIM39-202ENST00000376659 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
TRIM39-202ENST00000376659 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
TRIM39-202ENST00000376659 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
TRIM39-202ENST00000376659 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
TRIM39-202ENST00000376659 MT1EP04732 61 aa3.4□□□□□ -1.86
TRIM39-202ENST00000376659 MT1LQ93083 61 aa3.39□□□□□ -1.87
TRIM39-202ENST00000376659 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
TRIM39-202ENST00000376659 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms